Wall clock time and date at job start Mon Mar 8 2021 06:11:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35897 * 117.00239 * 2 1 4 4 C 1.38731 * 120.05953 * 180.02562 * 3 2 1 5 5 C 1.38144 * 119.94478 * 180.02562 * 4 3 2 6 6 C 1.38265 * 120.05509 * 359.97081 * 5 4 3 7 7 C 1.50703 * 119.94269 * 180.02562 * 6 5 4 8 8 H 1.08996 * 112.85169 * 348.80401 * 7 6 5 9 9 C 1.53781 * 113.61417 * 120.00404 * 7 6 5 10 10 C 1.53786 * 87.17350 * 139.93966 * 9 7 6 11 11 H 1.08993 * 113.61491 * 89.15923 * 10 9 7 12 12 N 1.46501 * 113.61366 * 220.06429 * 10 9 7 13 13 C 1.38408 * 119.99918 * 204.99892 * 12 10 9 14 14 N 1.32491 * 119.21239 * 359.73089 * 13 12 10 15 15 C 1.32279 * 120.73473 * 179.71956 * 14 13 12 16 16 C 1.38612 * 119.19630 * 0.54105 * 15 14 13 17 17 C 1.50699 * 120.71592 * 179.71065 * 16 15 14 18 18 O 1.42904 * 109.46683 * 245.01788 * 17 16 15 19 19 Si 1.86292 * 109.47611 * 5.02145 * 17 16 15 20 20 C 1.38596 * 118.56004 * 359.73033 * 16 15 14 21 21 N 1.32281 * 119.19741 * 0.02562 * 20 16 15 22 22 C 1.53782 * 113.61283 * 217.50219 * 7 6 5 23 23 C 1.38264 * 120.11526 * 0.29994 * 6 5 4 24 24 C 1.38150 * 120.05065 * 359.45285 * 23 6 5 25 25 H 1.08997 * 109.46614 * 60.00322 * 1 2 3 26 26 H 1.09005 * 109.46865 * 180.02562 * 1 2 3 27 27 H 1.08994 * 109.46930 * 299.99869 * 1 2 3 28 28 H 1.08002 * 120.02915 * 0.04374 * 4 3 2 29 29 H 1.07997 * 119.97163 * 180.02562 * 5 4 3 30 30 H 1.09002 * 113.61445 * 254.52965 * 9 7 6 31 31 H 1.09002 * 113.61408 * 25.34696 * 9 7 6 32 32 H 0.97002 * 119.99797 * 24.99368 * 12 10 9 33 33 H 1.07997 * 120.40466 * 180.29601 * 15 14 13 34 34 H 1.09008 * 109.47071 * 125.02479 * 17 16 15 35 35 H 0.96700 * 113.99966 * 180.02562 * 18 17 16 36 36 H 1.48501 * 109.99890 * 299.99787 * 19 17 16 37 37 H 1.48494 * 110.00037 * 61.31948 * 19 17 16 38 38 H 1.07996 * 120.40394 * 180.02562 * 20 16 15 39 39 H 1.08997 * 113.61668 * 334.56418 * 22 7 6 40 40 H 1.08994 * 113.61387 * 105.47152 * 22 7 6 41 41 H 1.07998 * 119.97614 * 179.69969 * 23 6 5 42 42 H 1.08000 * 120.02525 * 180.24520 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4314 1.2848 -0.0005 5 6 4.0561 2.5169 0.0000 6 6 3.3019 3.6757 0.0005 7 6 3.9861 5.0185 0.0005 8 1 5.0562 4.9483 0.1951 9 6 3.6375 5.8875 -1.2195 10 6 3.5911 7.0860 -0.2569 11 1 4.5529 7.5832 -0.1320 12 7 2.4979 8.0206 -0.5358 13 6 2.6029 9.3445 -0.1459 14 7 3.6967 9.7484 0.4833 15 6 3.8311 11.0080 0.8646 16 6 2.8059 11.9050 0.6083 17 6 2.9201 13.3463 1.0333 18 8 1.9306 13.6304 2.0244 19 14 4.6153 13.6522 1.7427 20 6 1.6735 11.4476 -0.0469 21 7 1.6048 10.1762 -0.4056 22 6 3.2700 6.0747 0.8587 23 6 1.9211 3.6048 0.0066 24 6 1.2915 2.3751 0.0010 25 1 -0.3632 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 4.0209 0.3799 -0.0017 29 1 5.1345 2.5750 -0.0008 30 1 4.4395 5.9491 -1.9551 31 1 2.6720 5.6475 -1.6649 32 1 1.7006 7.7116 -0.9938 33 1 4.7269 11.3325 1.3729 34 1 2.7655 13.9932 0.1696 35 1 1.9452 14.5428 2.3446 36 1 4.8384 12.7764 2.9210 37 1 5.6519 13.3910 0.7120 38 1 0.8571 12.1210 -0.2621 39 1 2.2034 5.8870 0.9823 40 1 3.7753 6.2875 1.8007 41 1 1.3342 4.5114 0.0119 42 1 0.2129 2.3202 0.0018 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100432_12175864.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:11:44 Heat of formation + Delta-G solvation = 50.217314 kcal Electronic energy + Delta-G solvation = -24676.816531 eV Core-core repulsion = 21011.271444 eV Total energy + Delta-G solvation = -3665.545088 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.142 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.10300 -41.37153 -40.25299 -38.21260 -37.79078 -35.60093 -34.67991 -32.46594 -32.02487 -30.96704 -28.37193 -26.90581 -26.74088 -25.96223 -25.06821 -23.70429 -23.05953 -22.10999 -20.59020 -19.30341 -19.18648 -18.73327 -18.37464 -17.33877 -16.81970 -16.66645 -16.64338 -16.30980 -15.95041 -15.78399 -15.67718 -15.20317 -14.94650 -14.69388 -14.64136 -14.42982 -14.15426 -14.02135 -13.55118 -13.41837 -13.15618 -13.06121 -12.80992 -12.48729 -12.23836 -12.18705 -11.84557 -11.78194 -11.66628 -11.59172 -11.45490 -11.13290 -10.58180 -9.95108 -9.94120 -9.10510 -8.96140 -5.06627 0.06174 0.17260 0.40218 0.44951 1.20790 1.57376 1.83165 1.88477 2.34386 2.73944 2.79901 3.10836 3.37138 3.43982 3.57794 3.62061 3.68773 3.76605 3.86598 3.88687 3.91316 3.96151 4.08732 4.13054 4.18545 4.20581 4.38518 4.46113 4.46897 4.53608 4.61906 4.65270 4.68684 4.72970 4.78788 4.94209 4.97222 5.09112 5.10459 5.30389 5.39399 5.42673 5.70714 5.80696 5.81761 6.01234 6.41928 6.44860 6.57989 7.30267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.063 4.063 8 H 0.103 0.897 9 C -0.137 4.137 10 C 0.137 3.863 11 H 0.121 0.879 12 N -0.683 5.683 13 C 0.568 3.432 14 N -0.561 5.561 15 C 0.195 3.805 16 C -0.249 4.249 17 C -0.050 4.050 18 O -0.548 6.548 19 Si 0.680 3.320 20 C 0.227 3.773 21 N -0.568 5.568 22 C -0.147 4.147 23 C -0.076 4.076 24 C -0.205 4.205 25 H 0.056 0.944 26 H 0.101 0.899 27 H 0.056 0.944 28 H 0.131 0.869 29 H 0.130 0.870 30 H 0.079 0.921 31 H 0.088 0.912 32 H 0.415 0.585 33 H 0.158 0.842 34 H 0.076 0.924 35 H 0.383 0.617 36 H -0.249 1.249 37 H -0.253 1.253 38 H 0.172 0.828 39 H 0.087 0.913 40 H 0.076 0.924 41 H 0.123 0.877 42 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.037 3.753 -0.150 3.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.108 4.108 7 C -0.082 4.082 8 H 0.121 0.879 9 C -0.176 4.176 10 C 0.031 3.969 11 H 0.139 0.861 12 N -0.318 5.318 13 C 0.211 3.789 14 N -0.283 5.283 15 C 0.027 3.973 16 C -0.257 4.257 17 C -0.162 4.162 18 O -0.354 6.354 19 Si 0.581 3.419 20 C 0.058 3.942 21 N -0.290 5.290 22 C -0.186 4.186 23 C -0.094 4.094 24 C -0.224 4.224 25 H 0.074 0.926 26 H 0.120 0.880 27 H 0.074 0.926 28 H 0.149 0.851 29 H 0.148 0.852 30 H 0.098 0.902 31 H 0.107 0.893 32 H 0.253 0.747 33 H 0.174 0.826 34 H 0.094 0.906 35 H 0.231 0.769 36 H -0.173 1.173 37 H -0.177 1.177 38 H 0.189 0.811 39 H 0.106 0.894 40 H 0.094 0.906 41 H 0.141 0.859 42 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.755 1.451 -0.316 1.666 hybrid contribution -0.947 0.572 -0.209 1.126 sum -0.191 2.023 -0.525 2.098 Atomic orbital electron populations 1.23083 0.78134 1.04206 1.01401 1.86083 1.21584 1.26904 1.88597 1.19084 0.92447 0.84236 0.96373 1.20462 0.91424 0.98794 1.06120 1.20882 0.99893 0.90913 0.97555 1.19515 0.93312 0.94298 1.03632 1.21215 0.99876 0.90255 0.96877 0.87883 1.23503 1.03068 0.94124 0.96862 1.22630 0.91292 0.87104 0.95855 0.86125 1.44219 1.21628 1.03777 1.62204 1.19426 0.85191 0.87222 0.87042 1.67882 1.24912 1.17551 1.17951 1.22615 0.96678 0.87338 0.90681 1.20713 0.99084 0.96986 1.08936 1.24303 1.03826 0.93332 0.94781 1.86496 1.56406 1.34611 1.57917 0.95073 0.74897 0.90332 0.81582 1.22826 0.94878 0.90080 0.86386 1.68009 1.29654 1.04697 1.26614 1.23704 1.01520 0.94847 0.98503 1.20773 0.94022 0.96941 0.97687 1.21241 1.00118 0.92316 1.08737 0.92568 0.88032 0.92579 0.85088 0.85216 0.90212 0.89309 0.74746 0.82573 0.90620 0.76873 1.17319 1.17721 0.81092 0.89416 0.90560 0.85882 0.85448 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.88 10.50 -19.42 -0.20 -1.08 16 3 C 0.12 0.33 6.69 -39.22 -0.26 0.07 16 4 C -0.15 -0.31 9.99 -39.43 -0.39 -0.70 16 5 C -0.07 -0.07 9.70 -39.61 -0.38 -0.45 16 6 C -0.11 -0.07 5.29 -104.60 -0.55 -0.63 16 7 C -0.06 0.05 3.98 -90.96 -0.36 -0.32 16 8 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 9 C -0.14 0.15 7.29 -25.92 -0.19 -0.04 16 10 C 0.14 0.03 4.26 -67.02 -0.29 -0.26 16 11 H 0.12 0.14 7.37 -51.93 -0.38 -0.24 16 12 N -0.68 -0.99 5.51 -54.91 -0.30 -1.29 16 13 C 0.57 2.26 8.42 -322.81 -2.72 -0.46 16 14 N -0.56 -2.43 9.13 -13.93 -0.13 -2.56 16 15 C 0.19 0.63 9.92 -17.22 -0.17 0.46 16 16 C -0.25 -0.54 5.40 -104.35 -0.56 -1.10 16 17 C -0.05 0.05 2.82 36.01 0.10 0.15 16 18 O -0.55 0.36 12.82 -35.23 -0.45 -0.09 16 19 Si 0.68 -1.26 29.92 -169.99 -5.09 -6.35 16 20 C 0.23 0.57 10.99 -17.23 -0.19 0.38 16 21 N -0.57 -2.32 10.46 -13.93 -0.15 -2.46 16 22 C -0.15 0.01 7.26 -25.82 -0.19 -0.18 16 23 C -0.08 -0.06 8.61 -39.60 -0.34 -0.41 16 24 C -0.21 -0.30 9.04 -39.43 -0.36 -0.65 16 25 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 26 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 27 H 0.06 -0.08 7.66 -51.93 -0.40 -0.48 16 28 H 0.13 0.14 8.06 -52.49 -0.42 -0.29 16 29 H 0.13 -0.13 8.05 -52.49 -0.42 -0.56 16 30 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.09 -0.11 7.70 -51.93 -0.40 -0.51 16 32 H 0.41 0.06 8.84 -40.82 -0.36 -0.30 16 33 H 0.16 0.29 5.04 -52.49 -0.26 0.02 16 34 H 0.08 -0.22 7.96 -51.92 -0.41 -0.63 16 35 H 0.38 -2.18 8.74 45.56 0.40 -1.78 16 36 H -0.25 -0.32 7.06 56.52 0.40 0.08 16 37 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 38 H 0.17 0.00 8.06 -52.49 -0.42 -0.42 16 39 H 0.09 0.01 6.29 -51.93 -0.33 -0.32 16 40 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 41 H 0.12 -0.07 6.63 -52.49 -0.35 -0.42 16 42 H 0.13 -0.03 6.30 -52.49 -0.33 -0.36 16 LS Contribution 348.87 15.07 5.26 5.26 Total: 0.00 -8.00 348.87 -12.31 -20.31 By element: Atomic # 1 Polarization: -3.18 SS G_CDS: -5.38 Total: -8.57 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -5.86 Total: -3.17 kcal Atomic # 7 Polarization: -5.74 SS G_CDS: -0.58 Total: -6.32 kcal Atomic # 8 Polarization: -0.52 SS G_CDS: -0.66 Total: -1.17 kcal Atomic # 14 Polarization: -1.26 SS G_CDS: -5.09 Total: -6.35 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -8.00 -12.31 -20.31 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100432_12175864.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.527 kcal (2) G-P(sol) polarization free energy of solvation -8.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.310 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.217 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds