Wall clock time and date at job start Mon Mar 8 2021 06:11:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35900 * 116.99302 * 2 1 4 4 C 1.38736 * 120.05255 * 180.02562 * 3 2 1 5 5 C 1.38143 * 119.94384 * 180.02562 * 4 3 2 6 6 C 1.38260 * 120.05811 * 0.02562 * 5 4 3 7 7 C 1.50694 * 119.94693 * 179.97438 * 6 5 4 8 8 H 1.08998 * 112.90806 * 11.24653 * 7 6 5 9 9 C 1.53784 * 113.61748 * 142.50037 * 7 6 5 10 10 C 1.53778 * 87.08293 * 139.98200 * 9 7 6 11 11 H 1.09006 * 113.69187 * 89.12519 * 10 9 7 12 12 N 1.46495 * 113.61430 * 220.02210 * 10 9 7 13 13 C 1.39010 * 119.99666 * 252.49580 * 12 10 9 14 14 N 1.32400 * 119.70221 * 179.97438 * 13 12 10 15 15 C 1.31974 * 121.61883 * 179.71013 * 14 13 12 16 16 C 1.38022 * 120.85473 * 0.57282 * 15 14 13 17 17 C 1.50699 * 120.33216 * 179.73480 * 16 15 14 18 18 O 1.42903 * 109.47152 * 244.72624 * 17 16 15 19 19 Si 1.86305 * 109.47184 * 4.72096 * 17 16 15 20 20 C 1.38880 * 119.33082 * 359.46179 * 16 15 14 21 21 C 1.38297 * 118.50318 * 0.24557 * 20 16 15 22 22 C 1.53783 * 87.08391 * 334.57006 * 10 9 7 23 23 C 1.38263 * 120.11176 * 0.25123 * 6 5 4 24 24 C 1.38153 * 120.05217 * 359.45104 * 23 6 5 25 25 H 1.09002 * 109.46950 * 299.99942 * 1 2 3 26 26 H 1.08994 * 109.47372 * 60.00341 * 1 2 3 27 27 H 1.09002 * 109.46591 * 180.02562 * 1 2 3 28 28 H 1.08001 * 120.02617 * 0.03667 * 4 3 2 29 29 H 1.08003 * 119.96723 * 179.97438 * 5 4 3 30 30 H 1.08996 * 113.60909 * 25.43245 * 9 7 6 31 31 H 1.09000 * 113.61338 * 254.52715 * 9 7 6 32 32 H 0.96995 * 120.00217 * 72.49750 * 12 10 9 33 33 H 1.08001 * 119.57317 * 180.28849 * 15 14 13 34 34 H 1.08997 * 109.47198 * 124.72302 * 17 16 15 35 35 H 0.96700 * 114.00311 * 180.02562 * 18 17 16 36 36 H 1.48497 * 110.00233 * 300.00062 * 19 17 16 37 37 H 1.48492 * 109.99800 * 61.32455 * 19 17 16 38 38 H 1.07997 * 120.74322 * 180.27212 * 20 16 15 39 39 H 1.08004 * 120.44831 * 180.02562 * 21 20 16 40 40 H 1.08996 * 113.61712 * 139.98080 * 22 10 9 41 41 H 1.09002 * 113.61330 * 270.80374 * 22 10 9 42 42 H 1.08001 * 119.97443 * 179.70735 * 23 6 5 43 43 H 1.08003 * 120.02833 * 180.30058 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4313 1.2850 -0.0005 5 6 4.0559 2.5171 0.0000 6 6 3.3018 3.6759 0.0016 7 6 3.9858 5.0187 0.0028 8 1 5.0557 4.9499 -0.1936 9 6 3.2690 6.0760 -0.8535 10 6 3.5925 7.0845 0.2614 11 1 4.5547 7.5813 0.1369 12 7 2.5008 8.0205 0.5410 13 6 2.6077 9.3499 0.1491 14 7 1.6173 10.1907 0.4043 15 6 1.6812 11.4616 0.0544 16 6 2.7866 11.9595 -0.6054 17 6 2.8445 13.4114 -1.0047 18 8 2.8685 13.5129 -2.4300 19 14 1.3445 14.2975 -0.3444 20 6 3.8473 11.1102 -0.8923 21 6 3.7543 9.7850 -0.5080 22 6 3.6382 5.8861 1.2242 23 6 1.9210 3.6049 0.0079 24 6 1.2914 2.3751 0.0012 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5137 -0.8899 27 1 -0.3632 -1.0277 0.0005 28 1 4.0208 0.3801 -0.0016 29 1 5.1344 2.5752 0.0000 30 1 2.2024 5.8883 -0.9764 31 1 3.7736 6.2901 -1.7957 32 1 1.7035 7.7126 0.9996 33 1 0.8558 12.1196 0.2831 34 1 3.7455 13.8659 -0.5929 35 1 2.9062 14.4213 -2.7591 36 1 0.1093 13.6873 -0.8985 37 1 1.3249 14.2267 1.1387 38 1 4.7251 11.4766 -1.4037 39 1 4.5608 9.0972 -0.7150 40 1 4.4408 5.9469 1.9592 41 1 2.6728 5.6474 1.6703 42 1 1.3340 4.5114 0.0139 43 1 0.2128 2.3201 0.0012 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100432_13915762.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:11:48 Heat of formation + Delta-G solvation = 33.799084 kcal Electronic energy + Delta-G solvation = -24522.542667 eV Core-core repulsion = 20921.711543 eV Total energy + Delta-G solvation = -3600.831125 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 313.146 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -41.69162 -41.17690 -40.22985 -38.19072 -37.67345 -35.44538 -33.42067 -32.06633 -31.75264 -30.75956 -28.37511 -26.83478 -26.66445 -25.19191 -24.78803 -23.70816 -22.71934 -21.85048 -20.51940 -19.20002 -18.75748 -18.44225 -18.07345 -17.33242 -16.80872 -16.68254 -16.57131 -16.25755 -15.77944 -15.56333 -15.36342 -15.08415 -14.84997 -14.66557 -14.41777 -14.28524 -14.06238 -13.86370 -13.75347 -13.55935 -13.39580 -13.07843 -12.82419 -12.52812 -12.23276 -12.21072 -11.97097 -11.69181 -11.63448 -11.50836 -11.04183 -10.70748 -10.55241 -10.17441 -9.96417 -9.02662 -8.67378 -4.97398 0.24080 0.37898 0.41821 0.45370 1.30751 1.65976 1.98641 2.07897 2.32715 2.71794 2.82276 3.36118 3.47474 3.52557 3.57657 3.61695 3.79943 3.85225 3.86286 3.92198 3.94747 4.07722 4.12180 4.14445 4.19288 4.32124 4.34860 4.39022 4.45606 4.50157 4.55826 4.62002 4.63984 4.72991 4.73720 4.88311 4.88956 5.02399 5.06766 5.12219 5.31147 5.35018 5.39799 5.52485 5.68134 5.79015 6.01476 6.42844 6.53211 6.65448 7.16118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.150 4.150 5 C -0.074 4.074 6 C -0.108 4.108 7 C -0.064 4.064 8 H 0.103 0.897 9 C -0.149 4.149 10 C 0.129 3.871 11 H 0.112 0.888 12 N -0.711 5.711 13 C 0.408 3.592 14 N -0.540 5.540 15 C 0.151 3.849 16 C -0.191 4.191 17 C -0.055 4.055 18 O -0.548 6.548 19 Si 0.677 3.323 20 C -0.003 4.003 21 C -0.237 4.237 22 C -0.135 4.135 23 C -0.076 4.076 24 C -0.205 4.205 25 H 0.056 0.944 26 H 0.056 0.944 27 H 0.101 0.899 28 H 0.131 0.869 29 H 0.130 0.870 30 H 0.090 0.910 31 H 0.076 0.924 32 H 0.406 0.594 33 H 0.146 0.854 34 H 0.072 0.928 35 H 0.381 0.619 36 H -0.249 1.249 37 H -0.253 1.253 38 H 0.138 0.862 39 H 0.136 0.864 40 H 0.079 0.921 41 H 0.089 0.911 42 H 0.123 0.877 43 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.788 2.183 -0.349 2.843 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.079 3.921 4 C -0.168 4.168 5 C -0.092 4.092 6 C -0.109 4.109 7 C -0.083 4.083 8 H 0.121 0.879 9 C -0.188 4.188 10 C 0.023 3.977 11 H 0.130 0.870 12 N -0.342 5.342 13 C 0.172 3.828 14 N -0.257 5.257 15 C -0.006 4.006 16 C -0.196 4.196 17 C -0.167 4.167 18 O -0.354 6.354 19 Si 0.578 3.422 20 C -0.028 4.028 21 C -0.262 4.262 22 C -0.174 4.174 23 C -0.094 4.094 24 C -0.224 4.224 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.120 0.880 28 H 0.149 0.851 29 H 0.148 0.852 30 H 0.108 0.892 31 H 0.095 0.905 32 H 0.242 0.758 33 H 0.163 0.837 34 H 0.090 0.910 35 H 0.229 0.771 36 H -0.174 1.174 37 H -0.178 1.178 38 H 0.155 0.845 39 H 0.154 0.846 40 H 0.098 0.902 41 H 0.108 0.892 42 H 0.141 0.859 43 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 0.511 0.838 0.559 1.130 hybrid contribution 0.434 -0.195 -0.229 0.528 sum 0.945 0.643 0.330 1.190 Atomic orbital electron populations 1.23087 0.78111 1.04226 1.01412 1.86086 1.21603 1.26885 1.88576 1.19088 0.92455 0.84245 0.96300 1.20466 0.91424 0.98808 1.06113 1.20877 0.99873 0.90918 0.97570 1.19496 0.93305 0.94280 1.03781 1.21235 0.99821 0.90369 0.96868 0.87890 1.23721 1.01850 0.94941 0.98279 1.22601 0.90988 0.87641 0.96489 0.87037 1.44541 1.21262 1.04901 1.63492 1.18434 0.89239 0.85752 0.89353 1.67135 1.29199 1.03775 1.25601 1.22026 0.95263 0.90547 0.92787 1.20010 0.97201 0.95785 1.06576 1.24424 1.09961 0.96313 0.86012 1.86501 1.97587 1.32557 1.18758 0.95343 0.77389 0.89089 0.80340 1.21181 0.97334 0.91824 0.92507 1.21485 0.99651 0.97471 1.07592 1.23474 1.03190 0.93938 0.96777 1.20774 0.94026 0.96950 0.97636 1.21243 1.00142 0.92323 1.08708 0.92571 0.92557 0.88014 0.85075 0.85219 0.89163 0.90547 0.75816 0.83748 0.91013 0.77144 1.17387 1.17815 0.84466 0.84620 0.90194 0.89229 0.85881 0.85445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -0.83 10.50 -19.43 -0.20 -1.03 16 3 C 0.12 0.30 6.69 -39.22 -0.26 0.04 16 4 C -0.15 -0.26 9.99 -39.43 -0.39 -0.65 16 5 C -0.07 -0.04 9.70 -39.61 -0.38 -0.42 16 6 C -0.11 -0.02 5.29 -104.61 -0.55 -0.57 16 7 C -0.06 0.11 3.98 -90.96 -0.36 -0.26 16 8 H 0.10 -0.27 8.09 -51.93 -0.42 -0.69 16 9 C -0.15 0.20 7.25 -25.92 -0.19 0.01 16 10 C 0.13 -0.18 4.03 -67.12 -0.27 -0.45 16 11 H 0.11 -0.24 6.10 -51.93 -0.32 -0.56 16 12 N -0.71 -0.50 5.53 -53.14 -0.29 -0.79 16 13 C 0.41 1.30 7.65 -155.02 -1.19 0.11 16 14 N -0.54 -2.73 10.39 -12.44 -0.13 -2.86 16 15 C 0.15 0.65 9.84 -17.57 -0.17 0.48 16 16 C -0.19 -0.57 5.39 -104.46 -0.56 -1.13 16 17 C -0.06 -0.01 2.81 36.01 0.10 0.09 16 18 O -0.55 -0.23 12.82 -35.23 -0.45 -0.69 16 19 Si 0.68 -0.47 29.87 -169.99 -5.08 -5.55 16 20 C 0.00 -0.01 9.84 -39.32 -0.39 -0.39 16 21 C -0.24 -0.45 9.29 -39.23 -0.36 -0.82 16 22 C -0.14 0.25 7.29 -25.91 -0.19 0.06 16 23 C -0.08 -0.04 8.59 -39.60 -0.34 -0.38 16 24 C -0.21 -0.26 9.04 -39.43 -0.36 -0.61 16 25 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 26 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 27 H 0.10 -0.24 8.14 -51.93 -0.42 -0.67 16 28 H 0.13 0.10 8.06 -52.49 -0.42 -0.32 16 29 H 0.13 -0.20 8.05 -52.48 -0.42 -0.62 16 30 H 0.09 -0.06 6.32 -51.93 -0.33 -0.39 16 31 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.41 0.14 8.85 -40.82 -0.36 -0.22 16 33 H 0.15 0.51 4.87 -52.49 -0.26 0.25 16 34 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 35 H 0.38 -1.77 8.74 45.56 0.40 -1.38 16 36 H -0.25 -0.63 7.06 56.52 0.40 -0.23 16 37 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 38 H 0.14 0.03 8.06 -52.49 -0.42 -0.39 16 39 H 0.14 -0.06 6.03 -52.48 -0.32 -0.38 16 40 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 41 H 0.09 -0.14 7.69 -51.93 -0.40 -0.53 16 42 H 0.12 -0.10 6.67 -52.49 -0.35 -0.45 16 43 H 0.13 -0.04 6.30 -52.48 -0.33 -0.37 16 LS Contribution 351.29 15.07 5.29 5.29 Total: 0.00 -7.82 351.29 -11.37 -19.19 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -5.63 Total: -9.63 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -4.88 Total: -3.93 kcal Atomic # 7 Polarization: -3.23 SS G_CDS: -0.42 Total: -3.66 kcal Atomic # 8 Polarization: -1.06 SS G_CDS: -0.66 Total: -1.72 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.08 Total: -5.55 kcal Total LS contribution 5.29 Total: 5.29 kcal Total: -7.82 -11.37 -19.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100432_13915762.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.992 kcal (2) G-P(sol) polarization free energy of solvation -7.824 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 45.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.369 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.193 kcal (6) G-S(sol) free energy of system = (1) + (5) 33.799 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds