Wall clock time and date at job start Mon Mar 8 2021 06:11:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35905 * 116.99491 * 2 1 4 4 C 1.38738 * 120.05284 * 180.02562 * 3 2 1 5 5 C 1.38145 * 119.94426 * 180.02562 * 4 3 2 6 6 C 1.38261 * 120.05441 * 0.02562 * 5 4 3 7 7 C 1.50702 * 119.94669 * 179.97438 * 6 5 4 8 8 H 1.09004 * 112.84345 * 348.80862 * 7 6 5 9 9 C 1.53781 * 113.61238 * 119.99577 * 7 6 5 10 10 C 1.53788 * 87.07979 * 140.07153 * 9 7 6 11 11 H 1.08994 * 113.61222 * 89.19687 * 10 9 7 12 12 N 1.46495 * 113.61425 * 220.02137 * 10 9 7 13 13 C 1.39140 * 120.00119 * 204.99962 * 12 10 9 14 14 N 1.32341 * 119.71829 * 0.26510 * 13 12 10 15 15 C 1.32007 * 121.64629 * 180.27154 * 14 13 12 16 16 C 1.37982 * 120.90207 * 359.72225 * 15 14 13 17 17 C 1.50697 * 120.32613 * 180.02562 * 16 15 14 18 18 O 1.42897 * 109.47579 * 244.98123 * 17 16 15 19 19 Si 1.86299 * 109.47243 * 4.98144 * 17 16 15 20 20 C 1.38904 * 119.34805 * 0.02562 * 16 15 14 21 21 C 1.38439 * 118.48364 * 0.02562 * 20 16 15 22 22 F 1.35104 * 120.47218 * 179.97438 * 21 20 16 23 23 C 1.53777 * 113.69571 * 217.53584 * 7 6 5 24 24 C 1.38268 * 120.11380 * 0.25150 * 6 5 4 25 25 C 1.38153 * 120.05265 * 359.45257 * 24 6 5 26 26 H 1.08995 * 109.46524 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.46731 * 299.99369 * 1 2 3 28 28 H 1.08998 * 109.47114 * 60.00167 * 1 2 3 29 29 H 1.08000 * 120.02729 * 0.03912 * 4 3 2 30 30 H 1.07994 * 119.97274 * 179.97438 * 5 4 3 31 31 H 1.09001 * 113.61522 * 25.52116 * 9 7 6 32 32 H 1.08996 * 113.61766 * 254.61847 * 9 7 6 33 33 H 0.97006 * 120.00385 * 24.99810 * 12 10 9 34 34 H 1.08006 * 119.54802 * 179.70621 * 15 14 13 35 35 H 1.09007 * 109.47134 * 124.98088 * 17 16 15 36 36 H 0.96699 * 113.99821 * 59.99352 * 18 17 16 37 37 H 1.48500 * 110.00140 * 179.97438 * 19 17 16 38 38 H 1.48494 * 109.99976 * 301.31813 * 19 17 16 39 39 H 1.07997 * 120.75505 * 179.97438 * 20 16 15 40 40 H 1.08994 * 113.61456 * 105.45758 * 23 7 6 41 41 H 1.09001 * 113.61291 * 334.55507 * 23 7 6 42 42 H 1.08005 * 119.97560 * 179.70709 * 24 6 5 43 43 H 1.08000 * 120.02602 * 180.29831 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0459 1.2110 0.0000 4 6 3.4313 1.2850 -0.0005 5 6 4.0561 2.5171 0.0000 6 6 3.3018 3.6759 0.0016 7 6 3.9859 5.0187 0.0028 8 1 5.0561 4.9483 0.1972 9 6 3.6372 5.8887 -1.2165 10 6 3.5947 7.0854 -0.2516 11 1 4.5576 7.5808 -0.1277 12 7 2.5036 8.0232 -0.5275 13 6 2.6127 9.3531 -0.1331 14 7 3.7069 9.7660 0.4863 15 6 3.8485 11.0174 0.8818 16 6 2.8553 11.9484 0.6566 17 6 3.0308 13.3738 1.1131 18 8 2.0650 13.6731 2.1229 19 14 4.7449 13.5968 1.8079 20 6 1.6920 11.5589 0.0050 21 6 1.5708 10.2398 -0.3973 22 9 0.4564 9.8173 -1.0338 23 6 3.2718 6.0753 0.8622 24 6 1.9210 3.6048 0.0079 25 6 1.2915 2.3751 0.0012 26 1 -0.3632 -1.0277 -0.0005 27 1 -0.3633 0.5137 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 4.0209 0.3801 -0.0016 30 1 5.1344 2.5753 0.0000 31 1 2.6705 5.6510 -1.6603 32 1 4.4386 5.9498 -1.9528 33 1 1.7050 7.7171 -0.9853 34 1 4.7540 11.3166 1.3887 35 1 2.8916 14.0462 0.2665 36 1 2.1299 13.1120 2.9077 37 1 4.9309 14.9987 2.2611 38 1 4.9584 12.6631 2.9426 39 1 0.8999 12.2686 -0.1826 40 1 3.7781 6.2870 1.8038 41 1 2.2051 5.8886 0.9866 42 1 1.3340 4.5114 0.0140 43 1 0.2129 2.3201 0.0013 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100432_17656566.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:11:59 Heat of formation + Delta-G solvation = -13.430586 kcal Electronic energy + Delta-G solvation = -27049.310122 eV Core-core repulsion = 22976.976989 eV Total energy + Delta-G solvation = -4072.333133 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -49.86403 -41.63624 -41.21833 -40.22031 -38.30613 -37.80175 -35.51881 -33.21741 -32.05814 -31.76327 -30.69780 -28.36720 -26.84204 -26.70301 -25.70940 -24.54192 -23.62277 -22.97687 -22.07622 -20.58413 -19.21531 -19.18782 -18.63490 -18.32903 -17.65216 -17.28436 -16.96316 -16.75211 -16.67268 -16.32441 -16.13665 -15.82760 -15.73913 -15.47184 -14.99445 -14.86244 -14.64523 -14.36039 -14.33411 -14.16111 -13.93461 -13.54630 -13.43607 -13.36304 -13.06977 -12.82893 -12.69314 -12.41433 -12.21850 -12.01886 -11.67223 -11.63099 -11.44138 -11.15795 -10.76336 -10.62919 -10.52998 -9.94936 -9.01173 -8.74922 -5.01518 -0.06284 0.12312 0.39396 0.44302 1.21234 1.53120 1.91657 1.97653 2.33677 2.54446 2.74680 3.04707 3.25159 3.34680 3.45966 3.55691 3.65834 3.70677 3.83202 3.83924 3.90890 3.95753 3.98650 4.11688 4.17841 4.19633 4.37745 4.42687 4.45077 4.48369 4.53516 4.63668 4.65207 4.68357 4.70774 4.78531 4.94177 4.97108 4.98455 5.09258 5.15551 5.33840 5.41060 5.46395 5.70557 5.80662 5.96671 6.18531 6.34953 6.44064 6.95635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.318 6.318 3 C 0.124 3.876 4 C -0.149 4.149 5 C -0.074 4.074 6 C -0.107 4.107 7 C -0.064 4.064 8 H 0.103 0.897 9 C -0.139 4.139 10 C 0.135 3.865 11 H 0.122 0.878 12 N -0.706 5.706 13 C 0.392 3.608 14 N -0.512 5.512 15 C 0.147 3.853 16 C -0.209 4.209 17 C -0.062 4.062 18 O -0.530 6.530 19 Si 0.684 3.316 20 C -0.037 4.037 21 C -0.022 4.022 22 F -0.134 7.134 23 C -0.147 4.147 24 C -0.077 4.077 25 C -0.206 4.206 26 H 0.101 0.899 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.131 0.869 30 H 0.130 0.870 31 H 0.086 0.914 32 H 0.079 0.921 33 H 0.412 0.588 34 H 0.163 0.837 35 H 0.120 0.880 36 H 0.376 0.624 37 H -0.254 1.254 38 H -0.256 1.256 39 H 0.149 0.851 40 H 0.075 0.925 41 H 0.086 0.914 42 H 0.123 0.877 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.309 -0.529 -1.049 1.759 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.232 6.232 3 C 0.078 3.922 4 C -0.168 4.168 5 C -0.093 4.093 6 C -0.107 4.107 7 C -0.083 4.083 8 H 0.121 0.879 9 C -0.177 4.177 10 C 0.030 3.970 11 H 0.140 0.860 12 N -0.337 5.337 13 C 0.153 3.847 14 N -0.229 5.229 15 C -0.010 4.010 16 C -0.214 4.214 17 C -0.172 4.172 18 O -0.336 6.336 19 Si 0.585 3.415 20 C -0.063 4.063 21 C -0.048 4.048 22 F -0.113 7.113 23 C -0.186 4.186 24 C -0.095 4.095 25 C -0.224 4.224 26 H 0.120 0.880 27 H 0.074 0.926 28 H 0.074 0.926 29 H 0.149 0.851 30 H 0.148 0.852 31 H 0.105 0.895 32 H 0.098 0.902 33 H 0.249 0.751 34 H 0.180 0.820 35 H 0.138 0.862 36 H 0.224 0.776 37 H -0.179 1.179 38 H -0.181 1.181 39 H 0.166 0.834 40 H 0.094 0.906 41 H 0.104 0.896 42 H 0.141 0.859 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 2.460 -0.801 -0.620 2.660 hybrid contribution -2.473 0.117 0.329 2.497 sum -0.013 -0.684 -0.291 0.743 Atomic orbital electron populations 1.23082 0.78144 1.04206 1.01388 1.86087 1.21576 1.26906 1.88603 1.19085 0.92454 0.84231 0.96393 1.20468 0.91418 0.98812 1.06094 1.20884 0.99903 0.90910 0.97555 1.19528 0.93296 0.94362 1.03558 1.21227 0.99875 0.90219 0.96952 0.87897 1.23503 1.02944 0.94396 0.96884 1.22559 0.91659 0.87212 0.95572 0.86007 1.44638 1.21504 1.04802 1.62770 1.18480 0.88886 0.86120 0.91180 1.67299 1.21680 1.18059 1.15824 1.22404 0.97522 0.87007 0.94098 1.20849 0.96158 0.98227 1.06172 1.24829 1.04063 0.93467 0.94864 1.86615 1.55188 1.61934 1.29893 0.95063 0.79041 0.81057 0.86389 1.21286 0.97962 0.93554 0.93529 1.18019 0.86064 0.94007 1.06751 1.91491 1.49612 1.90250 1.79952 1.23664 1.01393 0.95006 0.98555 1.20767 0.94037 0.96896 0.97753 1.21236 1.00103 0.92335 1.08757 0.88036 0.92583 0.92580 0.85094 0.85200 0.89504 0.90233 0.75102 0.81999 0.86245 0.77599 1.17862 1.18099 0.83361 0.90587 0.89584 0.85940 0.85481 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.79 10.50 -19.44 -0.20 -1.00 16 3 C 0.12 0.29 6.69 -39.22 -0.26 0.03 16 4 C -0.15 -0.25 9.99 -39.43 -0.39 -0.65 16 5 C -0.07 -0.04 9.70 -39.61 -0.38 -0.42 16 6 C -0.11 -0.02 5.29 -104.60 -0.55 -0.57 16 7 C -0.06 0.09 3.97 -90.96 -0.36 -0.27 16 8 H 0.10 -0.22 8.09 -51.93 -0.42 -0.64 16 9 C -0.14 0.25 7.30 -25.92 -0.19 0.06 16 10 C 0.14 -0.14 4.27 -67.12 -0.29 -0.43 16 11 H 0.12 -0.05 7.40 -51.93 -0.38 -0.43 16 12 N -0.71 0.15 5.51 -53.06 -0.29 -0.14 16 13 C 0.39 0.53 7.49 -154.86 -1.16 -0.62 16 14 N -0.51 -0.70 9.13 -12.36 -0.11 -0.82 16 15 C 0.15 -0.03 9.83 -17.57 -0.17 -0.20 16 16 C -0.21 0.08 5.36 -104.47 -0.56 -0.48 16 17 C -0.06 0.07 2.82 36.00 0.10 0.17 16 18 O -0.53 -0.23 12.84 -35.23 -0.45 -0.68 16 19 Si 0.68 -1.35 29.91 -169.99 -5.08 -6.44 16 20 C -0.04 -0.02 9.82 -39.26 -0.39 -0.41 16 21 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 22 F -0.13 -0.28 16.65 2.25 0.04 -0.25 16 23 C -0.15 0.15 7.25 -25.92 -0.19 -0.03 16 24 C -0.08 -0.03 8.62 -39.60 -0.34 -0.37 16 25 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 26 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 28 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 29 H 0.13 0.10 8.06 -52.49 -0.42 -0.33 16 30 H 0.13 -0.19 8.05 -52.49 -0.42 -0.61 16 31 H 0.09 -0.15 7.71 -51.93 -0.40 -0.55 16 32 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 33 H 0.41 -0.48 8.20 -40.82 -0.33 -0.82 16 34 H 0.16 -0.37 4.84 -52.48 -0.25 -0.62 16 35 H 0.12 -0.23 7.96 -51.93 -0.41 -0.65 16 36 H 0.38 -0.87 8.70 45.56 0.40 -0.47 16 37 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 38 H -0.26 0.07 7.01 56.52 0.40 0.46 16 39 H 0.15 -0.05 8.06 -52.49 -0.42 -0.47 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.09 -0.07 6.30 -51.93 -0.33 -0.39 16 42 H 0.12 -0.13 6.64 -52.48 -0.35 -0.48 16 43 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 LS Contribution 359.31 15.07 5.41 5.41 Total: 0.00 -6.29 359.31 -10.83 -17.13 By element: Atomic # 1 Polarization: -3.74 SS G_CDS: -5.35 Total: -9.09 kcal Atomic # 6 Polarization: 0.66 SS G_CDS: -4.79 Total: -4.13 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.41 Total: -0.96 kcal Atomic # 8 Polarization: -1.02 SS G_CDS: -0.66 Total: -1.68 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: -5.08 Total: -6.44 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -6.29 -10.83 -17.13 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100432_17656566.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.696 kcal (2) G-P(sol) polarization free energy of solvation -6.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.127 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds