Wall clock time and date at job start Mon Mar 8 2021 06:13:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86303 * 109.46993 * 2 1 4 4 C 1.50689 * 109.47056 * 120.00290 * 2 1 3 5 5 C 1.38608 * 120.72505 * 64.99825 * 4 2 1 6 6 N 1.32273 * 119.19690 * 179.97438 * 5 4 2 7 7 C 1.32486 * 120.74482 * 359.97438 * 6 5 4 8 8 N 1.38407 * 119.22079 * 180.02562 * 7 6 5 9 9 C 1.46501 * 120.00176 * 179.97438 * 8 7 6 10 10 H 1.08994 * 109.47128 * 324.99711 * 9 8 7 11 11 C 1.53001 * 109.47052 * 85.00111 * 9 8 7 12 12 C 1.52993 * 109.47407 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47164 * 300.00083 * 12 11 9 14 14 H 1.08999 * 109.47264 * 299.99647 * 13 12 11 15 15 O 1.42899 * 109.47347 * 179.97438 * 13 12 11 16 16 C 1.42905 * 113.99778 * 89.99741 * 15 13 12 17 17 F 1.39895 * 109.47068 * 300.00169 * 16 15 13 18 18 F 1.39897 * 109.46886 * 60.00383 * 16 15 13 19 19 C 1.53001 * 109.47026 * 59.99684 * 13 12 11 20 20 C 1.53000 * 109.46901 * 204.99845 * 9 8 7 21 21 N 1.32500 * 121.56628 * 0.27763 * 7 6 5 22 22 C 1.32273 * 120.73461 * 359.43938 * 21 7 6 23 23 H 0.96700 * 113.99927 * 300.00096 * 1 2 3 24 24 H 1.08998 * 109.46614 * 240.00137 * 2 1 3 25 25 H 1.48506 * 109.99593 * 178.68350 * 3 2 1 26 26 H 1.48500 * 109.99970 * 299.99987 * 3 2 1 27 27 H 1.08001 * 120.39772 * 359.95727 * 5 4 2 28 28 H 0.96998 * 119.99485 * 0.02562 * 8 7 6 29 29 H 1.08998 * 109.46987 * 300.00144 * 11 9 8 30 30 H 1.09005 * 109.47028 * 59.99730 * 11 9 8 31 31 H 1.08992 * 109.47852 * 179.97438 * 12 11 9 32 32 H 1.09001 * 109.47217 * 59.99452 * 12 11 9 33 33 H 1.09001 * 109.47103 * 179.97438 * 16 15 13 34 34 H 1.09001 * 109.47379 * 60.00616 * 19 13 12 35 35 H 1.09008 * 109.47077 * 180.02562 * 19 13 12 36 36 H 1.08997 * 109.47430 * 60.00230 * 20 9 8 37 37 H 1.08999 * 109.47561 * 300.00032 * 20 9 8 38 38 H 1.08001 * 120.39997 * 180.25329 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2303 5 6 1.6926 -2.0634 1.4139 6 7 2.1478 -2.6567 2.5050 7 6 2.8250 -1.9728 3.4154 8 7 3.2873 -2.6255 4.5450 9 6 4.0385 -1.8860 5.5625 10 1 4.6526 -1.1259 5.0797 11 6 3.0617 -1.2140 6.5295 12 6 3.8461 -0.4422 7.5925 13 6 4.7449 -1.4094 8.3655 14 1 4.1305 -2.1696 8.8480 15 8 5.4780 -0.6885 9.3579 16 6 4.8153 -0.6013 10.6210 17 9 3.5880 0.0505 10.4596 18 9 4.5971 -1.8887 11.1230 19 6 5.7217 -2.0814 7.3984 20 6 4.9376 -2.8528 6.3356 21 7 3.0660 -0.6778 3.2727 22 6 2.6435 -0.0255 2.2024 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 3.5347 1.7703 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 1.1413 -2.6262 0.6752 28 1 3.1145 -3.5727 4.6626 29 1 2.4211 -0.5253 5.9787 30 1 2.4475 -1.9742 7.0123 31 1 3.1503 0.0369 8.2812 32 1 4.4606 0.3179 7.1101 33 1 5.4362 -0.0399 11.3191 34 1 6.3362 -1.3213 6.9160 35 1 6.3618 -2.7708 7.9491 36 1 5.6335 -3.3315 5.6467 37 1 4.3235 -3.6130 6.8184 38 1 2.8465 1.0293 2.0897 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100672_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:11 Heat of formation + Delta-G solvation = -133.813082 kcal Electronic energy + Delta-G solvation = -24838.844094 eV Core-core repulsion = 20739.315460 eV Total energy + Delta-G solvation = -4099.528634 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.123 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -50.09263 -48.19356 -42.11040 -40.45431 -38.49072 -37.79200 -35.56084 -34.67980 -32.54403 -31.99927 -29.80939 -26.81688 -26.19101 -25.72693 -23.97030 -23.50963 -22.69554 -21.34286 -19.55146 -19.26271 -18.80018 -18.71653 -18.66346 -18.06960 -16.88560 -16.61245 -16.08609 -16.02642 -15.94305 -15.61511 -15.55418 -15.20937 -15.01990 -14.64231 -14.56225 -14.46041 -14.23412 -14.07545 -13.73576 -13.47989 -13.35692 -13.16770 -13.01867 -12.42500 -12.30601 -12.21968 -12.05028 -11.85136 -11.77310 -11.73242 -11.29325 -10.98224 -10.58931 -10.00527 -9.11517 -5.11715 0.07232 0.16778 1.21953 1.55927 1.72553 1.92055 1.94580 2.64473 2.83375 3.13453 3.40113 3.41239 3.45306 3.58204 3.60546 3.70101 3.73485 3.74966 3.91796 3.97530 4.03605 4.06755 4.19527 4.26278 4.31137 4.47961 4.50535 4.60578 4.75210 4.78051 4.87954 4.97020 5.03246 5.07054 5.18482 5.30060 5.54829 5.77935 6.01089 6.40469 6.51023 7.29953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.046 4.046 3 Si 0.680 3.320 4 C -0.295 4.295 5 C 0.223 3.777 6 N -0.570 5.570 7 C 0.569 3.431 8 N -0.692 5.692 9 C 0.158 3.842 10 H 0.096 0.904 11 C -0.125 4.125 12 C -0.140 4.140 13 C 0.076 3.924 14 H 0.075 0.925 15 O -0.378 6.378 16 C 0.404 3.596 17 F -0.207 7.207 18 F -0.208 7.208 19 C -0.108 4.108 20 C -0.126 4.126 21 N -0.560 5.560 22 C 0.200 3.800 23 H 0.379 0.621 24 H 0.115 0.885 25 H -0.255 1.255 26 H -0.251 1.251 27 H 0.170 0.830 28 H 0.414 0.586 29 H 0.076 0.924 30 H 0.064 0.936 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.168 0.832 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.080 0.920 37 H 0.073 0.927 38 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.816 1.592 1.942 2.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.158 4.158 3 Si 0.581 3.419 4 C -0.303 4.303 5 C 0.055 3.945 6 N -0.291 5.291 7 C 0.212 3.788 8 N -0.328 5.328 9 C 0.053 3.947 10 H 0.114 0.886 11 C -0.164 4.164 12 C -0.178 4.178 13 C 0.020 3.980 14 H 0.093 0.907 15 O -0.300 6.300 16 C 0.312 3.688 17 F -0.189 7.189 18 F -0.190 7.190 19 C -0.147 4.147 20 C -0.164 4.164 21 N -0.283 5.283 22 C 0.032 3.968 23 H 0.226 0.774 24 H 0.133 0.867 25 H -0.180 1.180 26 H -0.175 1.175 27 H 0.187 0.813 28 H 0.252 0.748 29 H 0.095 0.905 30 H 0.083 0.917 31 H 0.097 0.903 32 H 0.097 0.903 33 H 0.184 0.816 34 H 0.098 0.902 35 H 0.098 0.902 36 H 0.099 0.901 37 H 0.091 0.909 38 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 1.986 1.548 1.922 3.168 hybrid contribution -0.663 -0.715 -0.760 1.237 sum 1.323 0.832 1.162 1.948 Atomic orbital electron populations 1.86513 1.17149 1.81642 1.49268 1.24696 0.85098 1.09605 0.96417 0.95014 0.81104 0.77799 0.87968 1.21705 1.09153 0.97844 1.01633 1.22834 0.89142 0.90962 0.91552 1.67985 1.16588 1.40041 1.04516 1.19387 0.87003 0.85553 0.86838 1.44256 1.58590 1.12051 1.17859 1.21059 0.92091 0.94144 0.87385 0.88555 1.21894 0.98238 0.99962 0.96340 1.22110 0.98906 0.98548 0.98242 1.22417 0.93503 0.93657 0.88428 0.90710 1.88443 1.45746 1.75421 1.20398 1.23201 0.80494 0.78084 0.86988 1.93064 1.48768 1.81305 1.95746 1.93068 1.95476 1.42923 1.87581 1.21486 0.97548 0.99944 0.95681 1.21778 0.98839 0.98098 0.97658 1.67923 1.26963 1.08260 1.25107 1.22768 0.88195 0.99193 0.86629 0.77374 0.86740 1.17983 1.17519 0.81329 0.74844 0.90542 0.91704 0.90310 0.90299 0.81569 0.90161 0.90185 0.90117 0.90877 0.81714 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.40 12.85 -35.23 -0.45 -0.06 16 2 C -0.05 0.06 2.83 36.00 0.10 0.16 16 3 Si 0.68 -1.32 29.88 -169.99 -5.08 -6.40 16 4 C -0.30 0.06 5.36 -104.35 -0.56 -0.50 16 5 C 0.22 0.22 10.99 -17.23 -0.19 0.03 16 6 N -0.57 -1.51 10.46 -13.93 -0.15 -1.65 16 7 C 0.57 1.26 8.40 -322.81 -2.71 -1.45 16 8 N -0.69 -0.10 5.22 -55.80 -0.29 -0.39 16 9 C 0.16 -0.15 2.45 -67.93 -0.17 -0.31 16 10 H 0.10 0.02 7.51 -51.93 -0.39 -0.37 16 11 C -0.13 0.08 5.51 -26.73 -0.15 -0.06 16 12 C -0.14 0.09 5.39 -26.73 -0.14 -0.06 16 13 C 0.08 -0.05 2.40 -26.73 -0.06 -0.11 16 14 H 0.07 -0.02 7.20 -51.93 -0.37 -0.40 16 15 O -0.38 -0.03 10.29 -35.23 -0.36 -0.39 16 16 C 0.40 -0.42 6.26 101.05 0.63 0.21 16 17 F -0.21 -0.13 15.46 2.25 0.03 -0.10 16 18 F -0.21 -0.17 16.63 2.25 0.04 -0.13 16 19 C -0.11 0.19 5.57 -26.76 -0.15 0.04 16 20 C -0.13 0.29 5.39 -26.76 -0.14 0.14 16 21 N -0.56 -1.02 9.21 -13.93 -0.13 -1.15 16 22 C 0.20 0.00 9.92 -17.22 -0.17 -0.17 16 23 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 24 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 25 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 26 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 27 H 0.17 -0.12 8.06 -52.49 -0.42 -0.54 16 28 H 0.41 -0.37 8.72 -40.82 -0.36 -0.72 16 29 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 30 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.08 0.01 6.50 -51.93 -0.34 -0.32 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.17 -0.80 8.14 -51.93 -0.42 -1.22 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 36 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.17 -0.43 5.07 -52.49 -0.27 -0.70 16 LS Contribution 319.54 15.07 4.82 4.82 Total: 0.00 -6.87 319.54 -10.03 -16.90 By element: Atomic # 1 Polarization: -4.62 SS G_CDS: -4.74 Total: -9.36 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -3.71 Total: -2.07 kcal Atomic # 7 Polarization: -2.63 SS G_CDS: -0.57 Total: -3.20 kcal Atomic # 8 Polarization: 0.36 SS G_CDS: -0.82 Total: -0.45 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.07 Total: -0.23 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.08 Total: -6.40 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -6.87 -10.03 -16.90 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.912 kcal (2) G-P(sol) polarization free energy of solvation -6.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.785 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.901 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.813 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds