Wall clock time and date at job start Mon Mar 8 2021 06:13:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86303 * 109.46993 * 2 1 4 4 C 1.50689 * 109.47056 * 120.00290 * 2 1 3 5 5 C 1.38608 * 120.72505 * 64.99825 * 4 2 1 6 6 N 1.32273 * 119.19690 * 179.97438 * 5 4 2 7 7 C 1.32486 * 120.74482 * 359.97438 * 6 5 4 8 8 N 1.38407 * 119.22079 * 180.02562 * 7 6 5 9 9 C 1.46501 * 120.00176 * 179.97438 * 8 7 6 10 10 H 1.08994 * 109.47128 * 324.99711 * 9 8 7 11 11 C 1.53001 * 109.47052 * 85.00111 * 9 8 7 12 12 C 1.52993 * 109.47407 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47164 * 300.00083 * 12 11 9 14 14 H 1.08999 * 109.47264 * 299.99647 * 13 12 11 15 15 O 1.42899 * 109.47347 * 179.97438 * 13 12 11 16 16 C 1.42905 * 113.99778 * 89.99741 * 15 13 12 17 17 F 1.39895 * 109.47068 * 300.00169 * 16 15 13 18 18 F 1.39897 * 109.46886 * 60.00383 * 16 15 13 19 19 C 1.53001 * 109.47026 * 59.99684 * 13 12 11 20 20 C 1.53000 * 109.46901 * 204.99845 * 9 8 7 21 21 N 1.32500 * 121.56628 * 0.27763 * 7 6 5 22 22 C 1.32273 * 120.73461 * 359.43938 * 21 7 6 23 23 H 0.96700 * 113.99927 * 300.00096 * 1 2 3 24 24 H 1.08998 * 109.46614 * 240.00137 * 2 1 3 25 25 H 1.48506 * 109.99593 * 178.68350 * 3 2 1 26 26 H 1.48500 * 109.99970 * 299.99987 * 3 2 1 27 27 H 1.08001 * 120.39772 * 359.95727 * 5 4 2 28 28 H 0.96998 * 119.99485 * 0.02562 * 8 7 6 29 29 H 1.08998 * 109.46987 * 300.00144 * 11 9 8 30 30 H 1.09005 * 109.47028 * 59.99730 * 11 9 8 31 31 H 1.08992 * 109.47852 * 179.97438 * 12 11 9 32 32 H 1.09001 * 109.47217 * 59.99452 * 12 11 9 33 33 H 1.09001 * 109.47103 * 179.97438 * 16 15 13 34 34 H 1.09001 * 109.47379 * 60.00616 * 19 13 12 35 35 H 1.09008 * 109.47077 * 180.02562 * 19 13 12 36 36 H 1.08997 * 109.47430 * 60.00230 * 20 9 8 37 37 H 1.08999 * 109.47561 * 300.00032 * 20 9 8 38 38 H 1.08001 * 120.39997 * 180.25329 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2303 5 6 1.6926 -2.0634 1.4139 6 7 2.1478 -2.6567 2.5050 7 6 2.8250 -1.9728 3.4154 8 7 3.2873 -2.6255 4.5450 9 6 4.0385 -1.8860 5.5625 10 1 4.6526 -1.1259 5.0797 11 6 3.0617 -1.2140 6.5295 12 6 3.8461 -0.4422 7.5925 13 6 4.7449 -1.4094 8.3655 14 1 4.1305 -2.1696 8.8480 15 8 5.4780 -0.6885 9.3579 16 6 4.8153 -0.6013 10.6210 17 9 3.5880 0.0505 10.4596 18 9 4.5971 -1.8887 11.1230 19 6 5.7217 -2.0814 7.3984 20 6 4.9376 -2.8528 6.3356 21 7 3.0660 -0.6778 3.2727 22 6 2.6435 -0.0255 2.2024 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 3.5347 1.7703 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 1.1413 -2.6262 0.6752 28 1 3.1145 -3.5727 4.6626 29 1 2.4211 -0.5253 5.9787 30 1 2.4475 -1.9742 7.0123 31 1 3.1503 0.0369 8.2812 32 1 4.4606 0.3179 7.1101 33 1 5.4362 -0.0399 11.3191 34 1 6.3362 -1.3213 6.9160 35 1 6.3618 -2.7708 7.9491 36 1 5.6335 -3.3315 5.6467 37 1 4.3235 -3.6130 6.8184 38 1 2.8465 1.0293 2.0897 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15100672_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:10 Heat of formation + Delta-G solvation = -131.251612 kcal Electronic energy + Delta-G solvation = -24838.733020 eV Core-core repulsion = 20739.315460 eV Total energy + Delta-G solvation = -4099.417560 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.123 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.06094 -48.17628 -42.14168 -40.40115 -38.44817 -37.73201 -35.53333 -34.73633 -32.53488 -31.92322 -29.76540 -26.76440 -26.14855 -25.73259 -23.90288 -23.47891 -22.67889 -21.28630 -19.52782 -19.22939 -18.74979 -18.69611 -18.63165 -18.01760 -16.84301 -16.60582 -16.06541 -15.98592 -15.92219 -15.58304 -15.52910 -15.17352 -15.00381 -14.63094 -14.55295 -14.43052 -14.18994 -14.09277 -13.69299 -13.42963 -13.26323 -13.13196 -12.95659 -12.35429 -12.25631 -12.23408 -11.99658 -11.89623 -11.78506 -11.70066 -11.27029 -10.93356 -10.54699 -10.04467 -9.12597 -4.99576 0.04412 0.12695 1.32081 1.64322 1.75399 1.98966 2.05356 2.74507 2.78415 3.14941 3.51420 3.53606 3.55030 3.63565 3.70093 3.73967 3.78247 3.83503 3.98509 4.03278 4.08739 4.16312 4.23858 4.32362 4.39754 4.53251 4.57043 4.69301 4.77463 4.83995 5.00108 5.06301 5.07936 5.09271 5.23443 5.32964 5.61557 5.75633 6.02742 6.38950 6.78303 7.25934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.047 4.047 3 Si 0.767 3.233 4 C -0.288 4.288 5 C 0.212 3.788 6 N -0.591 5.591 7 C 0.553 3.447 8 N -0.688 5.688 9 C 0.164 3.836 10 H 0.086 0.914 11 C -0.117 4.117 12 C -0.133 4.133 13 C 0.074 3.926 14 H 0.071 0.929 15 O -0.387 6.387 16 C 0.398 3.602 17 F -0.219 7.219 18 F -0.221 7.221 19 C -0.104 4.104 20 C -0.118 4.118 21 N -0.574 5.574 22 C 0.195 3.805 23 H 0.394 0.606 24 H 0.113 0.887 25 H -0.284 1.284 26 H -0.296 1.296 27 H 0.181 0.819 28 H 0.418 0.582 29 H 0.063 0.937 30 H 0.064 0.936 31 H 0.070 0.930 32 H 0.076 0.924 33 H 0.207 0.793 34 H 0.079 0.921 35 H 0.084 0.916 36 H 0.086 0.914 37 H 0.080 0.920 38 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.074 1.769 2.243 3.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.159 4.159 3 Si 0.673 3.327 4 C -0.296 4.296 5 C 0.044 3.956 6 N -0.314 5.314 7 C 0.197 3.803 8 N -0.324 5.324 9 C 0.059 3.941 10 H 0.104 0.896 11 C -0.156 4.156 12 C -0.171 4.171 13 C 0.018 3.982 14 H 0.089 0.911 15 O -0.309 6.309 16 C 0.307 3.693 17 F -0.201 7.201 18 F -0.203 7.203 19 C -0.143 4.143 20 C -0.156 4.156 21 N -0.296 5.296 22 C 0.028 3.972 23 H 0.244 0.756 24 H 0.131 0.869 25 H -0.211 1.211 26 H -0.223 1.223 27 H 0.198 0.802 28 H 0.256 0.744 29 H 0.081 0.919 30 H 0.083 0.917 31 H 0.088 0.912 32 H 0.095 0.905 33 H 0.223 0.777 34 H 0.097 0.903 35 H 0.103 0.897 36 H 0.104 0.896 37 H 0.099 0.901 38 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 2.226 1.709 2.248 3.596 hybrid contribution -0.767 -0.743 -0.898 1.395 sum 1.459 0.966 1.351 2.210 Atomic orbital electron populations 1.86481 1.17227 1.82077 1.50440 1.24800 0.85109 1.10116 0.95836 0.93979 0.77920 0.75218 0.85607 1.21764 1.08645 0.97419 1.01778 1.23131 0.89239 0.91731 0.91489 1.67993 1.17411 1.40706 1.05241 1.19639 0.87399 0.85940 0.87359 1.44314 1.58336 1.12247 1.17522 1.21016 0.91878 0.94197 0.87042 0.89615 1.21793 0.98069 0.99595 0.96166 1.22027 0.98667 0.98485 0.97969 1.22457 0.93720 0.93491 0.88567 0.91125 1.88434 1.46075 1.75485 1.20904 1.23853 0.80443 0.77830 0.87216 1.93039 1.49764 1.81446 1.95830 1.93041 1.95567 1.43994 1.87675 1.21465 0.97335 0.99947 0.95503 1.21721 0.98671 0.97781 0.97422 1.67972 1.27522 1.08243 1.25903 1.23191 0.87688 1.00201 0.86165 0.75565 0.86930 1.21052 1.22346 0.80226 0.74406 0.91854 0.91748 0.91174 0.90504 0.77731 0.90260 0.89736 0.89554 0.90125 0.79469 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.10 12.85 -148.98 -1.91 -0.81 16 2 C -0.05 0.13 2.83 71.23 0.20 0.33 16 3 Si 0.77 -3.18 29.88 68.60 2.05 -1.13 16 4 C -0.29 0.15 5.36 -19.69 -0.11 0.04 16 5 C 0.21 0.49 10.99 84.71 0.93 1.42 16 6 N -0.59 -3.51 10.46 -197.98 -2.07 -5.58 16 7 C 0.55 2.81 8.40 261.49 2.20 5.01 16 8 N -0.69 -0.61 5.22 -330.44 -1.73 -2.33 16 9 C 0.16 -0.23 2.45 44.99 0.11 -0.12 16 10 H 0.09 0.10 7.51 -2.39 -0.02 0.08 16 11 C -0.12 0.07 5.51 30.59 0.17 0.24 16 12 C -0.13 0.08 5.39 30.59 0.16 0.24 16 13 C 0.07 -0.07 2.40 30.60 0.07 0.00 16 14 H 0.07 -0.02 7.20 -2.39 -0.02 -0.03 16 15 O -0.39 -0.02 10.29 -148.98 -1.53 -1.56 16 16 C 0.40 -0.94 6.26 113.37 0.71 -0.23 16 17 F -0.22 -0.34 15.46 44.97 0.70 0.36 16 18 F -0.22 -0.36 16.63 44.97 0.75 0.39 16 19 C -0.10 0.37 5.57 30.58 0.17 0.54 16 20 C -0.12 0.55 5.39 30.58 0.16 0.72 16 21 N -0.57 -2.34 9.21 -197.98 -1.82 -4.16 16 22 C 0.19 -0.02 9.92 84.72 0.84 0.82 16 23 H 0.39 -3.73 8.70 -74.06 -0.64 -4.38 16 24 H 0.11 -0.26 7.96 -2.39 -0.02 -0.28 16 25 H -0.28 -0.21 7.11 99.48 0.71 0.50 16 26 H -0.30 -1.05 7.11 99.48 0.71 -0.35 16 27 H 0.18 -0.20 8.06 -2.91 -0.02 -0.22 16 28 H 0.42 -0.53 8.72 -92.71 -0.81 -1.34 16 29 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 30 H 0.06 -0.03 8.14 -2.38 -0.02 -0.05 16 31 H 0.07 0.09 6.50 -2.39 -0.02 0.07 16 32 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 33 H 0.21 -2.23 8.14 -2.39 -0.02 -2.25 16 34 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 35 H 0.08 -0.34 8.14 -2.38 -0.02 -0.36 16 36 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 37 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 38 H 0.19 -1.11 5.07 -2.91 -0.01 -1.13 16 Total: 0.00 -16.43 319.54 -0.25 -16.68 By element: Atomic # 1 Polarization: -10.56 SS G_CDS: -0.30 Total: -10.86 kcal Atomic # 6 Polarization: 3.40 SS G_CDS: 5.63 Total: 9.02 kcal Atomic # 7 Polarization: -6.46 SS G_CDS: -5.62 Total: -12.08 kcal Atomic # 8 Polarization: 1.08 SS G_CDS: -3.45 Total: -2.37 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 1.44 Total: 0.75 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.05 Total: -1.13 kcal Total: -16.43 -0.25 -16.68 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.574 kcal (2) G-P(sol) polarization free energy of solvation -16.430 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.248 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.677 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.252 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds