Wall clock time and date at job start Mon Mar 8 2021 06:13:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47151 * 2 1 4 4 C 1.50697 * 109.46650 * 119.99881 * 2 1 3 5 5 C 1.38845 * 120.34024 * 65.00295 * 4 2 1 6 6 C 1.38342 * 118.50810 * 179.72427 * 5 4 2 7 7 C 1.39098 * 119.09657 * 359.97438 * 6 5 4 8 8 N 1.39005 * 119.69942 * 180.02562 * 7 6 5 9 9 C 1.46498 * 120.00531 * 0.02562 * 8 7 6 10 10 H 1.09006 * 109.46809 * 34.99221 * 9 8 7 11 11 C 1.52993 * 109.47599 * 154.99390 * 9 8 7 12 12 C 1.52996 * 109.47213 * 179.97438 * 11 9 8 13 13 C 1.52996 * 109.47574 * 300.00094 * 12 11 9 14 14 H 1.08998 * 109.47222 * 300.00138 * 13 12 11 15 15 O 1.42903 * 109.47504 * 179.97438 * 13 12 11 16 16 C 1.42903 * 113.99588 * 149.99774 * 15 13 12 17 17 F 1.39896 * 109.47483 * 300.00140 * 16 15 13 18 18 F 1.39897 * 109.46977 * 60.00864 * 16 15 13 19 19 C 1.53001 * 109.46835 * 59.99904 * 13 12 11 20 20 C 1.52996 * 109.47279 * 300.00017 * 19 13 12 21 21 N 1.32417 * 120.59116 * 0.02562 * 7 6 5 22 22 C 1.31947 * 121.62762 * 359.97438 * 21 7 6 23 23 H 0.96699 * 113.99992 * 300.00181 * 1 2 3 24 24 H 1.09000 * 109.46969 * 239.99288 * 2 1 3 25 25 H 1.48498 * 109.99622 * 178.68179 * 3 2 1 26 26 H 1.48498 * 110.00088 * 299.99554 * 3 2 1 27 27 H 1.08001 * 120.74201 * 359.69786 * 5 4 2 28 28 H 1.07994 * 120.44584 * 180.02562 * 6 5 4 29 29 H 0.97000 * 119.99694 * 180.02562 * 8 7 6 30 30 H 1.09001 * 109.47523 * 300.00218 * 11 9 8 31 31 H 1.09006 * 109.47179 * 60.00056 * 11 9 8 32 32 H 1.09002 * 109.47447 * 60.00375 * 12 11 9 33 33 H 1.09006 * 109.46994 * 179.97438 * 12 11 9 34 34 H 1.09001 * 109.46378 * 180.02562 * 16 15 13 35 35 H 1.08998 * 109.47024 * 60.00113 * 19 13 12 36 36 H 1.09001 * 109.46958 * 180.02562 * 19 13 12 37 37 H 1.09002 * 109.47659 * 300.00025 * 20 19 13 38 38 H 1.08994 * 109.47361 * 179.97438 * 20 19 13 39 39 H 1.07996 * 119.57401 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6875 -2.0659 1.4063 6 6 2.1709 -2.6812 2.5472 7 6 2.8812 -1.9253 3.4740 8 7 3.3731 -2.5309 4.6245 9 6 3.1431 -3.9590 4.8563 10 1 3.1679 -4.4901 3.9047 11 6 4.2352 -4.5089 5.7759 12 6 3.9945 -6.0002 6.0184 13 6 2.6273 -6.1958 6.6767 14 1 2.6027 -5.6644 7.6281 15 8 2.4023 -7.5888 6.9027 16 6 1.5786 -7.8680 8.0366 17 9 2.1825 -7.3550 9.1895 18 9 0.3257 -7.2707 7.8611 19 6 1.5352 -5.6460 5.7571 20 6 1.7757 -4.1546 5.5146 21 7 3.0929 -0.6342 3.2702 22 6 2.6438 -0.0212 2.1915 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5139 -0.8899 25 1 3.5346 1.7702 0.0321 26 1 1.5616 2.4679 -1.2085 27 1 1.1327 -2.6273 0.6691 28 1 1.9999 -3.7341 2.7154 29 1 3.8686 -2.0078 5.2739 30 1 5.2093 -4.3692 5.3072 31 1 4.2103 -3.9778 6.7275 32 1 4.0191 -6.5317 5.0671 33 1 4.7729 -6.3920 6.6733 34 1 1.4561 -8.9462 8.1399 35 1 1.5598 -6.1774 4.8057 36 1 0.5612 -5.7849 6.2262 37 1 1.7512 -3.6231 6.4659 38 1 0.9980 -3.7630 4.8591 39 1 2.8360 1.0332 2.0587 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100672_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:15 Heat of formation + Delta-G solvation = -151.100090 kcal Electronic energy + Delta-G solvation = -24672.964179 eV Core-core repulsion = 20638.111835 eV Total energy + Delta-G solvation = -4034.852344 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.128 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -50.13237 -48.23316 -41.53476 -40.42228 -38.48653 -37.64203 -35.44302 -33.41549 -32.14867 -31.71298 -29.64505 -26.71213 -25.95072 -24.92083 -23.90260 -23.42906 -22.26741 -21.33818 -19.47214 -18.99863 -18.70963 -18.61592 -18.43777 -17.69016 -16.67588 -16.49857 -16.19279 -15.90169 -15.81529 -15.61389 -15.42827 -15.03669 -14.90969 -14.62057 -14.42455 -14.33789 -14.21589 -14.03305 -13.76714 -13.59325 -13.44127 -13.30726 -13.01554 -12.51753 -12.38826 -12.30488 -12.12268 -11.98241 -11.76154 -11.30596 -10.99033 -10.71512 -10.39375 -10.37044 -8.71942 -5.02308 0.25301 0.43317 1.32163 1.64883 1.79791 1.99712 2.05054 2.60618 2.86463 3.33586 3.35994 3.49428 3.52571 3.60189 3.68531 3.77674 3.81193 3.85771 3.92221 3.96441 4.00830 4.08528 4.15128 4.23110 4.33284 4.42001 4.53201 4.53408 4.66008 4.74539 4.82788 4.89309 4.94008 4.94958 5.03548 5.11006 5.32231 5.48626 5.51779 5.98152 6.51457 6.60488 7.15979 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.052 4.052 3 Si 0.680 3.320 4 C -0.236 4.236 5 C -0.005 4.005 6 C -0.240 4.240 7 C 0.410 3.590 8 N -0.719 5.719 9 C 0.152 3.848 10 H 0.086 0.914 11 C -0.123 4.123 12 C -0.110 4.110 13 C 0.076 3.924 14 H 0.076 0.924 15 O -0.379 6.379 16 C 0.404 3.596 17 F -0.208 7.208 18 F -0.207 7.207 19 C -0.142 4.142 20 C -0.133 4.133 21 N -0.540 5.540 22 C 0.158 3.842 23 H 0.378 0.622 24 H 0.111 0.889 25 H -0.256 1.256 26 H -0.253 1.253 27 H 0.135 0.865 28 H 0.134 0.866 29 H 0.406 0.594 30 H 0.082 0.918 31 H 0.074 0.926 32 H 0.079 0.921 33 H 0.080 0.920 34 H 0.168 0.832 35 H 0.077 0.923 36 H 0.080 0.920 37 H 0.070 0.930 38 H 0.075 0.925 39 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.004 -1.648 2.049 2.630 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.164 4.164 3 Si 0.582 3.418 4 C -0.242 4.242 5 C -0.031 4.031 6 C -0.265 4.265 7 C 0.174 3.826 8 N -0.351 5.351 9 C 0.047 3.953 10 H 0.104 0.896 11 C -0.161 4.161 12 C -0.148 4.148 13 C 0.020 3.980 14 H 0.094 0.906 15 O -0.300 6.300 16 C 0.312 3.688 17 F -0.190 7.190 18 F -0.189 7.189 19 C -0.180 4.180 20 C -0.172 4.172 21 N -0.256 5.256 22 C 0.000 4.000 23 H 0.226 0.774 24 H 0.129 0.871 25 H -0.181 1.181 26 H -0.178 1.178 27 H 0.153 0.847 28 H 0.151 0.849 29 H 0.242 0.758 30 H 0.100 0.900 31 H 0.093 0.907 32 H 0.098 0.902 33 H 0.099 0.901 34 H 0.185 0.815 35 H 0.095 0.905 36 H 0.099 0.901 37 H 0.089 0.911 38 H 0.093 0.907 39 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 1.080 -1.204 1.615 2.286 hybrid contribution -0.361 -0.677 -0.234 0.802 sum 0.719 -1.881 1.381 2.442 Atomic orbital electron populations 1.86493 1.17348 1.81683 1.49257 1.24783 0.85011 1.09667 0.96931 0.94904 0.81182 0.78151 0.87552 1.20989 1.06949 0.96119 1.00096 1.21197 0.93132 0.93417 0.95341 1.21491 1.06707 1.01340 0.96936 1.18372 0.89133 0.88406 0.86679 1.44565 1.60279 1.09050 1.21173 1.21082 0.94622 0.80305 0.99327 0.89604 1.21750 0.98908 0.95255 1.00230 1.21512 0.95196 0.95863 1.02216 1.22406 0.96152 0.80098 0.99356 0.90607 1.88445 1.68462 1.27159 1.45954 1.23206 0.73813 0.96405 0.75340 1.93070 1.83675 1.90053 1.52195 1.93065 1.43952 1.87024 1.94839 1.22140 0.99236 0.95659 1.01003 1.22010 0.97444 0.95763 1.01957 1.67134 1.25846 1.09008 1.23654 1.22192 0.91370 0.98695 0.87745 0.77441 0.87118 1.18088 1.17819 0.84713 0.84865 0.75832 0.89976 0.90732 0.90231 0.90104 0.81533 0.90475 0.90146 0.91086 0.90654 0.82853 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.19 12.84 -35.23 -0.45 -0.64 16 2 C -0.05 0.00 2.82 36.00 0.10 0.11 16 3 Si 0.68 -0.57 29.83 -169.99 -5.07 -5.64 16 4 C -0.24 -0.15 5.36 -104.46 -0.56 -0.71 16 5 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 6 C -0.24 -0.14 8.83 -39.22 -0.35 -0.49 16 7 C 0.41 0.60 7.63 -155.02 -1.18 -0.58 16 8 N -0.72 0.43 5.24 -53.94 -0.28 0.14 16 9 C 0.15 -0.32 2.14 -67.93 -0.15 -0.47 16 10 H 0.09 -0.18 6.45 -51.93 -0.33 -0.51 16 11 C -0.12 0.36 5.39 -26.74 -0.14 0.22 16 12 C -0.11 0.26 5.57 -26.74 -0.15 0.11 16 13 C 0.08 -0.09 2.40 -26.73 -0.06 -0.16 16 14 H 0.08 -0.06 7.20 -51.93 -0.37 -0.43 16 15 O -0.38 0.14 10.29 -35.23 -0.36 -0.22 16 16 C 0.40 -0.55 6.26 101.05 0.63 0.08 16 17 F -0.21 -0.11 16.63 2.25 0.04 -0.07 16 18 F -0.21 -0.07 15.46 2.25 0.03 -0.03 16 19 C -0.14 0.21 5.39 -26.73 -0.14 0.07 16 20 C -0.13 0.24 5.42 -26.73 -0.14 0.09 16 21 N -0.54 -1.40 10.39 -12.44 -0.13 -1.53 16 22 C 0.16 0.18 9.84 -17.56 -0.17 0.00 16 23 H 0.38 -1.27 8.70 45.56 0.40 -0.87 16 24 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 25 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 26 H -0.25 -0.60 7.11 56.52 0.40 -0.20 16 27 H 0.14 -0.05 8.06 -52.49 -0.42 -0.47 16 28 H 0.13 -0.13 6.07 -52.49 -0.32 -0.45 16 29 H 0.41 -0.41 8.73 -40.82 -0.36 -0.77 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 31 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 34 H 0.17 -0.85 8.14 -51.93 -0.42 -1.27 16 35 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.08 -0.04 6.50 -51.93 -0.34 -0.38 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.07 -0.08 7.65 -51.93 -0.40 -0.48 16 39 H 0.15 -0.16 4.91 -52.49 -0.26 -0.42 16 LS Contribution 321.02 15.07 4.84 4.84 Total: 0.00 -6.45 321.02 -9.07 -15.51 By element: Atomic # 1 Polarization: -5.27 SS G_CDS: -4.97 Total: -10.24 kcal Atomic # 6 Polarization: 0.59 SS G_CDS: -2.71 Total: -2.12 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.41 Total: -1.39 kcal Atomic # 8 Polarization: -0.05 SS G_CDS: -0.82 Total: -0.86 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.07 Total: -0.10 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: -5.07 Total: -5.64 kcal Total LS contribution 4.84 Total: 4.84 kcal Total: -6.45 -9.07 -15.51 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.586 kcal (2) G-P(sol) polarization free energy of solvation -6.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.067 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.514 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds