Wall clock time and date at job start Mon Mar 8 2021 06:13:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47151 * 2 1 4 4 C 1.50697 * 109.46650 * 119.99881 * 2 1 3 5 5 C 1.38845 * 120.34024 * 65.00295 * 4 2 1 6 6 C 1.38342 * 118.50810 * 179.72427 * 5 4 2 7 7 C 1.39098 * 119.09657 * 359.97438 * 6 5 4 8 8 N 1.39005 * 119.69942 * 180.02562 * 7 6 5 9 9 C 1.46498 * 120.00531 * 0.02562 * 8 7 6 10 10 H 1.09006 * 109.46809 * 34.99221 * 9 8 7 11 11 C 1.52993 * 109.47599 * 154.99390 * 9 8 7 12 12 C 1.52996 * 109.47213 * 179.97438 * 11 9 8 13 13 C 1.52996 * 109.47574 * 300.00094 * 12 11 9 14 14 H 1.08998 * 109.47222 * 300.00138 * 13 12 11 15 15 O 1.42903 * 109.47504 * 179.97438 * 13 12 11 16 16 C 1.42903 * 113.99588 * 149.99774 * 15 13 12 17 17 F 1.39896 * 109.47483 * 300.00140 * 16 15 13 18 18 F 1.39897 * 109.46977 * 60.00864 * 16 15 13 19 19 C 1.53001 * 109.46835 * 59.99904 * 13 12 11 20 20 C 1.52996 * 109.47279 * 300.00017 * 19 13 12 21 21 N 1.32417 * 120.59116 * 0.02562 * 7 6 5 22 22 C 1.31947 * 121.62762 * 359.97438 * 21 7 6 23 23 H 0.96699 * 113.99992 * 300.00181 * 1 2 3 24 24 H 1.09000 * 109.46969 * 239.99288 * 2 1 3 25 25 H 1.48498 * 109.99622 * 178.68179 * 3 2 1 26 26 H 1.48498 * 110.00088 * 299.99554 * 3 2 1 27 27 H 1.08001 * 120.74201 * 359.69786 * 5 4 2 28 28 H 1.07994 * 120.44584 * 180.02562 * 6 5 4 29 29 H 0.97000 * 119.99694 * 180.02562 * 8 7 6 30 30 H 1.09001 * 109.47523 * 300.00218 * 11 9 8 31 31 H 1.09006 * 109.47179 * 60.00056 * 11 9 8 32 32 H 1.09002 * 109.47447 * 60.00375 * 12 11 9 33 33 H 1.09006 * 109.46994 * 179.97438 * 12 11 9 34 34 H 1.09001 * 109.46378 * 180.02562 * 16 15 13 35 35 H 1.08998 * 109.47024 * 60.00113 * 19 13 12 36 36 H 1.09001 * 109.46958 * 180.02562 * 19 13 12 37 37 H 1.09002 * 109.47659 * 300.00025 * 20 19 13 38 38 H 1.08994 * 109.47361 * 179.97438 * 20 19 13 39 39 H 1.07996 * 119.57401 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6875 -2.0659 1.4063 6 6 2.1709 -2.6812 2.5472 7 6 2.8812 -1.9253 3.4740 8 7 3.3731 -2.5309 4.6245 9 6 3.1431 -3.9590 4.8563 10 1 3.1679 -4.4901 3.9047 11 6 4.2352 -4.5089 5.7759 12 6 3.9945 -6.0002 6.0184 13 6 2.6273 -6.1958 6.6767 14 1 2.6027 -5.6644 7.6281 15 8 2.4023 -7.5888 6.9027 16 6 1.5786 -7.8680 8.0366 17 9 2.1825 -7.3550 9.1895 18 9 0.3257 -7.2707 7.8611 19 6 1.5352 -5.6460 5.7571 20 6 1.7757 -4.1546 5.5146 21 7 3.0929 -0.6342 3.2702 22 6 2.6438 -0.0212 2.1915 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5139 -0.8899 25 1 3.5346 1.7702 0.0321 26 1 1.5616 2.4679 -1.2085 27 1 1.1327 -2.6273 0.6691 28 1 1.9999 -3.7341 2.7154 29 1 3.8686 -2.0078 5.2739 30 1 5.2093 -4.3692 5.3072 31 1 4.2103 -3.9778 6.7275 32 1 4.0191 -6.5317 5.0671 33 1 4.7729 -6.3920 6.6733 34 1 1.4561 -8.9462 8.1399 35 1 1.5598 -6.1774 4.8057 36 1 0.5612 -5.7849 6.2262 37 1 1.7512 -3.6231 6.4659 38 1 0.9980 -3.7630 4.8591 39 1 2.8360 1.0332 2.0587 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15100672_13915762.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:14 Heat of formation + Delta-G solvation = -148.837435 kcal Electronic energy + Delta-G solvation = -24672.866063 eV Core-core repulsion = 20638.111835 eV Total energy + Delta-G solvation = -4034.754228 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.128 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -50.07659 -48.19251 -41.53383 -40.33235 -38.42716 -37.61472 -35.38940 -33.44680 -32.02738 -31.67152 -29.56740 -26.63816 -25.90422 -24.92087 -23.77638 -23.36571 -22.24472 -21.21243 -19.38809 -18.90645 -18.65036 -18.58389 -18.41988 -17.65769 -16.60924 -16.50676 -16.16952 -15.83604 -15.78464 -15.51512 -15.39397 -14.99175 -14.89645 -14.58554 -14.37483 -14.34631 -14.18330 -14.03918 -13.68366 -13.54685 -13.31537 -13.22938 -12.91219 -12.45521 -12.25007 -12.23995 -12.15703 -11.95757 -11.65647 -11.23302 -10.91111 -10.75278 -10.43628 -10.38486 -8.70961 -4.99200 0.22148 0.39233 1.34142 1.64264 1.92831 1.97463 2.13557 2.73448 2.82583 3.47084 3.52449 3.56634 3.63160 3.72192 3.78991 3.80942 3.89931 3.97238 4.03634 4.04101 4.08685 4.13066 4.28161 4.36564 4.38620 4.50769 4.55976 4.66967 4.75194 4.80177 4.98446 5.00576 5.04659 5.05885 5.12403 5.22510 5.32763 5.53107 5.60199 6.01484 6.53843 6.79830 7.13660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.054 4.054 3 Si 0.765 3.235 4 C -0.238 4.238 5 C -0.013 4.013 6 C -0.243 4.243 7 C 0.397 3.603 8 N -0.715 5.715 9 C 0.156 3.844 10 H 0.089 0.911 11 C -0.117 4.117 12 C -0.105 4.105 13 C 0.073 3.927 14 H 0.069 0.931 15 O -0.387 6.387 16 C 0.397 3.603 17 F -0.221 7.221 18 F -0.219 7.219 19 C -0.136 4.136 20 C -0.125 4.125 21 N -0.564 5.564 22 C 0.148 3.852 23 H 0.394 0.606 24 H 0.107 0.893 25 H -0.288 1.288 26 H -0.297 1.297 27 H 0.144 0.856 28 H 0.147 0.853 29 H 0.407 0.593 30 H 0.086 0.914 31 H 0.077 0.923 32 H 0.082 0.918 33 H 0.081 0.919 34 H 0.206 0.794 35 H 0.080 0.920 36 H 0.069 0.931 37 H 0.066 0.934 38 H 0.069 0.931 39 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.036 -2.180 2.194 3.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.165 4.165 3 Si 0.672 3.328 4 C -0.243 4.243 5 C -0.038 4.038 6 C -0.268 4.268 7 C 0.161 3.839 8 N -0.346 5.346 9 C 0.051 3.949 10 H 0.107 0.893 11 C -0.155 4.155 12 C -0.143 4.143 13 C 0.016 3.984 14 H 0.087 0.913 15 O -0.309 6.309 16 C 0.306 3.694 17 F -0.203 7.203 18 F -0.201 7.201 19 C -0.174 4.174 20 C -0.164 4.164 21 N -0.281 5.281 22 C -0.009 4.009 23 H 0.244 0.756 24 H 0.124 0.876 25 H -0.215 1.215 26 H -0.224 1.224 27 H 0.162 0.838 28 H 0.164 0.836 29 H 0.243 0.757 30 H 0.105 0.895 31 H 0.096 0.904 32 H 0.100 0.900 33 H 0.100 0.900 34 H 0.222 0.778 35 H 0.099 0.901 36 H 0.088 0.912 37 H 0.084 0.916 38 H 0.087 0.913 39 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 1.097 -1.752 1.792 2.735 hybrid contribution -0.384 -0.521 -0.289 0.709 sum 0.713 -2.273 1.502 2.817 Atomic orbital electron populations 1.86455 1.17420 1.82121 1.50456 1.24850 0.85042 1.10120 0.96492 0.93886 0.77913 0.75849 0.85186 1.21043 1.06875 0.96243 1.00148 1.21400 0.93184 0.93649 0.95615 1.21648 1.06410 1.01973 0.96728 1.18609 0.89465 0.88392 0.87394 1.44632 1.59861 1.09507 1.20637 1.21109 0.94638 0.79601 0.99601 0.89311 1.21694 0.98730 0.94855 1.00190 1.21485 0.94502 0.96151 1.02199 1.22470 0.96830 0.79900 0.99168 0.91305 1.88434 1.68662 1.27436 1.46373 1.23848 0.73014 0.97917 0.74574 1.93042 1.83908 1.90409 1.52939 1.93040 1.44727 1.87439 1.94871 1.22068 0.98638 0.95779 1.00965 1.21921 0.97490 0.95467 1.01554 1.67147 1.26795 1.09732 1.24469 1.22466 0.91351 0.99489 0.87606 0.75629 0.87572 1.21464 1.22443 0.83842 0.83566 0.75678 0.89502 0.90443 0.89983 0.89988 0.77774 0.90146 0.91206 0.91572 0.91263 0.81413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.20 12.84 -148.98 -1.91 -2.11 16 2 C -0.05 0.01 2.82 71.23 0.20 0.21 16 3 Si 0.77 -1.09 29.83 68.60 2.05 0.95 16 4 C -0.24 -0.30 5.36 -19.76 -0.11 -0.41 16 5 C -0.01 -0.02 9.83 22.44 0.22 0.20 16 6 C -0.24 -0.28 8.83 22.50 0.20 -0.08 16 7 C 0.40 1.23 7.63 133.05 1.02 2.25 16 8 N -0.72 0.79 5.24 -324.56 -1.70 -0.91 16 9 C 0.16 -0.69 2.14 44.99 0.10 -0.59 16 10 H 0.09 -0.42 6.45 -2.38 -0.02 -0.43 16 11 C -0.12 0.72 5.39 30.59 0.16 0.89 16 12 C -0.11 0.52 5.57 30.59 0.17 0.70 16 13 C 0.07 -0.16 2.40 30.59 0.07 -0.09 16 14 H 0.07 -0.07 7.20 -2.39 -0.02 -0.09 16 15 O -0.39 0.34 10.29 -148.98 -1.53 -1.19 16 16 C 0.40 -1.17 6.26 113.37 0.71 -0.46 16 17 F -0.22 -0.28 16.63 44.97 0.75 0.47 16 18 F -0.22 -0.20 15.46 44.97 0.70 0.49 16 19 C -0.14 0.37 5.39 30.59 0.16 0.54 16 20 C -0.13 0.42 5.42 30.59 0.17 0.59 16 21 N -0.56 -3.11 10.39 -193.26 -2.01 -5.12 16 22 C 0.15 0.35 9.84 84.64 0.83 1.18 16 23 H 0.39 -2.86 8.70 -74.06 -0.64 -3.50 16 24 H 0.11 0.07 7.96 -2.39 -0.02 0.05 16 25 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 26 H -0.30 -1.72 7.11 99.48 0.71 -1.01 16 27 H 0.14 -0.15 8.06 -2.91 -0.02 -0.17 16 28 H 0.15 -0.34 6.07 -2.91 -0.02 -0.36 16 29 H 0.41 -0.75 8.73 -92.71 -0.81 -1.56 16 30 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 31 H 0.08 -0.50 8.14 -2.38 -0.02 -0.52 16 32 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 33 H 0.08 -0.40 8.14 -2.38 -0.02 -0.42 16 34 H 0.21 -2.32 8.14 -2.39 -0.02 -2.34 16 35 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 36 H 0.07 -0.02 6.50 -2.39 -0.02 -0.04 16 37 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.07 -0.13 7.65 -2.39 -0.02 -0.14 16 39 H 0.17 -0.35 4.91 -2.91 -0.01 -0.36 16 Total: 0.00 -15.17 321.02 -0.08 -15.25 By element: Atomic # 1 Polarization: -12.45 SS G_CDS: -0.32 Total: -12.76 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: 3.91 Total: 4.93 kcal Atomic # 7 Polarization: -2.32 SS G_CDS: -3.71 Total: -6.03 kcal Atomic # 8 Polarization: 0.14 SS G_CDS: -3.45 Total: -3.30 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 1.44 Total: 0.97 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: 2.05 Total: 0.95 kcal Total: -15.17 -0.08 -15.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_13915762.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.591 kcal (2) G-P(sol) polarization free energy of solvation -15.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.762 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.076 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.247 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.837 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds