Wall clock time and date at job start Mon Mar 8 2021 06:13:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50699 * 109.47044 * 119.99776 * 2 1 3 5 5 C 1.33323 * 125.95299 * 65.00545 * 4 2 1 6 6 N 1.32122 * 114.58418 * 180.02562 * 5 4 2 7 7 C 1.29688 * 116.86236 * 359.97438 * 6 5 4 8 8 N 1.38612 * 124.94756 * 180.02562 * 7 6 5 9 9 C 1.46502 * 119.99964 * 0.02562 * 8 7 6 10 10 H 1.09005 * 109.46774 * 35.00525 * 9 8 7 11 11 C 1.53000 * 109.46963 * 155.00132 * 9 8 7 12 12 C 1.52997 * 109.47471 * 180.02562 * 11 9 8 13 13 C 1.53004 * 109.47038 * 300.00403 * 12 11 9 14 14 H 1.09005 * 109.46424 * 299.99541 * 13 12 11 15 15 O 1.42897 * 109.47240 * 179.97438 * 13 12 11 16 16 C 1.42902 * 113.99867 * 149.99686 * 15 13 12 17 17 F 1.39904 * 109.47023 * 300.00194 * 16 15 13 18 18 F 1.39897 * 109.47280 * 59.99705 * 16 15 13 19 19 C 1.52998 * 109.47179 * 59.99140 * 13 12 11 20 20 C 1.52991 * 109.47311 * 275.00350 * 9 8 7 21 21 S 1.70970 * 110.10164 * 359.72535 * 7 6 5 22 22 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 23 23 H 1.09001 * 109.47626 * 240.00326 * 2 1 3 24 24 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 25 25 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 26 26 H 1.08002 * 122.71144 * 359.97438 * 5 4 2 27 27 H 0.96998 * 120.00087 * 180.02562 * 8 7 6 28 28 H 1.09009 * 109.47244 * 300.00076 * 11 9 8 29 29 H 1.09005 * 109.47342 * 59.99838 * 11 9 8 30 30 H 1.09005 * 109.47138 * 59.99507 * 12 11 9 31 31 H 1.08992 * 109.47945 * 180.02562 * 12 11 9 32 32 H 1.08998 * 109.47199 * 179.97438 * 16 15 13 33 33 H 1.09005 * 109.47115 * 60.00824 * 19 13 12 34 34 H 1.09000 * 109.47068 * 180.02562 * 19 13 12 35 35 H 1.09011 * 109.47004 * 300.00071 * 20 9 8 36 36 H 1.08997 * 109.47633 * 59.99860 * 20 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7622 -2.0025 1.5122 6 7 2.2973 -2.3902 2.6564 7 6 2.9107 -1.4845 3.3531 8 7 3.5302 -1.7057 4.5731 9 6 3.5223 -3.0452 5.1665 10 1 3.5871 -3.7930 4.3761 11 6 4.7194 -3.1930 6.1078 12 6 4.7116 -4.5920 6.7271 13 6 3.4154 -4.7940 7.5146 14 1 3.3505 -4.0463 8.3052 15 8 3.4078 -6.1008 8.0925 16 6 2.6800 -6.1897 9.3191 17 9 3.2469 -5.3249 10.2614 18 9 1.3468 -5.8286 9.0974 19 6 2.2184 -4.6460 6.5733 20 6 2.2262 -3.2464 5.9541 21 16 2.8510 0.0202 2.5435 22 1 -0.3934 0.4417 0.7649 23 1 1.7924 -0.5138 -0.8900 24 1 1.5614 2.4679 -1.2085 25 1 1.5878 2.4586 1.2242 26 1 1.2302 -2.6776 0.8584 27 1 3.9690 -0.9737 5.0341 28 1 5.6428 -3.0496 5.5466 29 1 4.6547 -2.4451 6.8982 30 1 4.7765 -5.3397 5.9365 31 1 5.5640 -4.6973 7.3980 32 1 2.7216 -7.2128 9.6929 33 1 2.2833 -5.3937 5.7827 34 1 1.2950 -4.7894 7.1344 35 1 2.1615 -2.4985 6.7445 36 1 1.3734 -3.1411 5.2835 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100672_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:18 Heat of formation + Delta-G solvation = -143.920929 kcal Electronic energy + Delta-G solvation = -23180.264888 eV Core-core repulsion = 19234.876102 eV Total energy + Delta-G solvation = -3945.388786 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.084 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -50.10009 -48.20046 -40.98759 -40.19547 -38.40323 -37.73595 -35.39538 -32.03208 -31.55872 -29.93550 -26.78031 -26.22722 -24.62861 -23.95199 -23.20428 -21.50740 -20.68639 -19.78789 -19.32626 -18.82168 -18.67562 -18.23101 -17.20641 -16.73862 -16.37286 -16.18927 -15.83081 -15.76813 -15.60471 -15.14548 -15.04281 -14.88754 -14.61097 -14.44111 -14.28409 -13.86290 -13.76144 -13.46898 -13.37096 -13.00802 -12.88649 -12.46929 -12.36845 -12.32244 -12.05610 -11.97754 -11.74108 -11.26043 -10.97897 -10.85401 -10.23292 -10.18297 -8.74755 -5.04593 -0.01686 0.04229 0.70387 1.25629 1.55591 1.85553 1.91051 2.04636 2.12576 2.63857 3.35483 3.39760 3.42717 3.57110 3.61110 3.73200 3.89927 3.92178 3.97498 4.01507 4.04592 4.24297 4.29040 4.47798 4.54658 4.58956 4.73281 4.77861 4.85355 4.94866 4.99862 5.06861 5.13245 5.24771 5.53913 5.82819 6.03955 6.36605 7.01972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.017 4.017 3 Si 0.653 3.347 4 C -0.305 4.305 5 C 0.120 3.880 6 N -0.549 5.549 7 C 0.328 3.672 8 N -0.690 5.690 9 C 0.158 3.842 10 H 0.095 0.905 11 C -0.125 4.125 12 C -0.109 4.109 13 C 0.077 3.923 14 H 0.075 0.925 15 O -0.378 6.378 16 C 0.404 3.596 17 F -0.208 7.208 18 F -0.207 7.207 19 C -0.140 4.140 20 C -0.126 4.126 21 S 0.085 5.915 22 H 0.376 0.624 23 H 0.125 0.875 24 H -0.238 1.238 25 H -0.243 1.243 26 H 0.176 0.824 27 H 0.413 0.587 28 H 0.081 0.919 29 H 0.072 0.928 30 H 0.080 0.920 31 H 0.080 0.920 32 H 0.168 0.832 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.064 0.936 36 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.681 0.534 1.605 4.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.333 6.333 2 C -0.130 4.130 3 Si 0.552 3.448 4 C -0.428 4.428 5 C -0.031 4.031 6 N -0.275 5.275 7 C -0.043 4.043 8 N -0.329 5.329 9 C 0.052 3.948 10 H 0.113 0.887 11 C -0.163 4.163 12 C -0.147 4.147 13 C 0.020 3.980 14 H 0.093 0.907 15 O -0.300 6.300 16 C 0.312 3.688 17 F -0.190 7.190 18 F -0.189 7.189 19 C -0.179 4.179 20 C -0.165 4.165 21 S 0.335 5.665 22 H 0.224 0.776 23 H 0.143 0.857 24 H -0.161 1.161 25 H -0.168 1.168 26 H 0.192 0.808 27 H 0.251 0.749 28 H 0.100 0.900 29 H 0.091 0.909 30 H 0.099 0.901 31 H 0.098 0.902 32 H 0.185 0.815 33 H 0.097 0.903 34 H 0.097 0.903 35 H 0.083 0.917 36 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.988 1.249 1.460 4.427 hybrid contribution -1.540 -0.233 0.457 1.623 sum 2.448 1.016 1.917 3.271 Atomic orbital electron populations 1.86615 1.17545 1.79911 1.49201 1.24068 0.83450 1.09825 0.95692 0.95180 0.91812 0.75227 0.82535 1.25502 1.15051 0.98303 1.03951 1.21341 0.96550 0.93108 0.92086 1.66496 1.18795 1.33505 1.08662 1.23730 0.95427 0.93183 0.91955 1.44137 1.59196 1.12077 1.17446 1.21105 0.94553 0.83633 0.95555 0.88690 1.21788 0.98334 0.97296 0.98897 1.21495 0.96194 0.96945 1.00053 1.22415 0.96679 0.83224 0.95662 0.90724 1.88444 1.72323 1.32848 1.36372 1.23207 0.73017 0.93540 0.79010 1.93068 1.84948 1.74697 1.66338 1.93066 1.37479 1.93901 1.94447 1.22124 0.98268 0.97760 0.99717 1.21906 0.98543 0.96434 0.99647 1.84042 1.55204 1.11536 1.15759 0.77588 0.85718 1.16131 1.16754 0.80752 0.74935 0.90012 0.90926 0.90131 0.90151 0.81546 0.90335 0.90336 0.91704 0.90531 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.66 12.88 -35.23 -0.45 -1.11 16 2 C -0.02 0.00 2.99 36.01 0.11 0.11 16 3 Si 0.65 -0.38 31.06 -169.99 -5.28 -5.66 16 4 C -0.31 -0.20 5.73 -36.03 -0.21 -0.41 16 5 C 0.12 0.21 11.24 -19.14 -0.22 0.00 16 6 N -0.55 -1.45 9.90 -15.21 -0.15 -1.60 16 7 C 0.33 0.32 8.06 -87.68 -0.71 -0.39 16 8 N -0.69 0.82 5.23 -55.78 -0.29 0.53 16 9 C 0.16 -0.19 2.58 -67.93 -0.18 -0.37 16 10 H 0.10 0.05 7.77 -51.93 -0.40 -0.35 16 11 C -0.12 0.35 5.39 -26.73 -0.14 0.21 16 12 C -0.11 0.20 5.57 -26.73 -0.15 0.05 16 13 C 0.08 -0.04 2.40 -26.73 -0.06 -0.10 16 14 H 0.07 -0.03 7.20 -51.93 -0.37 -0.40 16 15 O -0.38 -0.09 10.29 -35.23 -0.36 -0.46 16 16 C 0.40 -0.36 6.26 101.05 0.63 0.27 16 17 F -0.21 -0.17 16.63 2.25 0.04 -0.13 16 18 F -0.21 -0.19 15.46 2.25 0.03 -0.15 16 19 C -0.14 0.03 5.39 -26.71 -0.14 -0.11 16 20 C -0.13 0.06 5.51 -26.71 -0.15 -0.09 16 21 S 0.09 -0.01 20.59 -107.50 -2.21 -2.22 16 22 H 0.38 -0.49 8.70 45.56 0.40 -0.10 16 23 H 0.13 -0.13 7.96 -51.93 -0.41 -0.54 16 24 H -0.24 -0.51 7.11 56.52 0.40 -0.10 16 25 H -0.24 -0.31 7.11 56.52 0.40 0.09 16 26 H 0.18 0.12 8.06 -52.49 -0.42 -0.30 16 27 H 0.41 -1.37 8.73 -40.82 -0.36 -1.73 16 28 H 0.08 -0.26 8.14 -51.92 -0.42 -0.69 16 29 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 30 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 31 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 32 H 0.17 -0.77 8.14 -51.93 -0.42 -1.20 16 33 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 34 H 0.08 0.05 6.50 -51.93 -0.34 -0.28 16 35 H 0.06 -0.05 8.14 -51.92 -0.42 -0.47 16 36 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 LS Contribution 317.44 15.07 4.78 4.78 Total: 0.00 -5.86 317.44 -9.60 -15.46 By element: Atomic # 1 Polarization: -4.11 SS G_CDS: -4.49 Total: -8.60 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -1.21 Total: -0.83 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.44 Total: -1.07 kcal Atomic # 8 Polarization: -0.75 SS G_CDS: -0.82 Total: -1.57 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.07 Total: -0.29 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: -5.28 Total: -5.66 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.21 Total: -2.22 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -5.86 -9.60 -15.46 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.464 kcal (2) G-P(sol) polarization free energy of solvation -5.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.323 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.921 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds