Wall clock time and date at job start Mon Mar 8 2021 06:13:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.47190 * 2 1 4 4 C 1.50699 * 109.47044 * 119.99776 * 2 1 3 5 5 C 1.33323 * 125.95299 * 65.00545 * 4 2 1 6 6 N 1.32122 * 114.58418 * 180.02562 * 5 4 2 7 7 C 1.29688 * 116.86236 * 359.97438 * 6 5 4 8 8 N 1.38612 * 124.94756 * 180.02562 * 7 6 5 9 9 C 1.46502 * 119.99964 * 0.02562 * 8 7 6 10 10 H 1.09005 * 109.46774 * 35.00525 * 9 8 7 11 11 C 1.53000 * 109.46963 * 155.00132 * 9 8 7 12 12 C 1.52997 * 109.47471 * 180.02562 * 11 9 8 13 13 C 1.53004 * 109.47038 * 300.00403 * 12 11 9 14 14 H 1.09005 * 109.46424 * 299.99541 * 13 12 11 15 15 O 1.42897 * 109.47240 * 179.97438 * 13 12 11 16 16 C 1.42902 * 113.99867 * 149.99686 * 15 13 12 17 17 F 1.39904 * 109.47023 * 300.00194 * 16 15 13 18 18 F 1.39897 * 109.47280 * 59.99705 * 16 15 13 19 19 C 1.52998 * 109.47179 * 59.99140 * 13 12 11 20 20 C 1.52991 * 109.47311 * 275.00350 * 9 8 7 21 21 S 1.70970 * 110.10164 * 359.72535 * 7 6 5 22 22 H 0.96695 * 114.00385 * 300.00492 * 1 2 3 23 23 H 1.09001 * 109.47626 * 240.00326 * 2 1 3 24 24 H 1.48506 * 110.00048 * 300.00131 * 3 2 1 25 25 H 1.48502 * 109.99996 * 61.31456 * 3 2 1 26 26 H 1.08002 * 122.71144 * 359.97438 * 5 4 2 27 27 H 0.96998 * 120.00087 * 180.02562 * 8 7 6 28 28 H 1.09009 * 109.47244 * 300.00076 * 11 9 8 29 29 H 1.09005 * 109.47342 * 59.99838 * 11 9 8 30 30 H 1.09005 * 109.47138 * 59.99507 * 12 11 9 31 31 H 1.08992 * 109.47945 * 180.02562 * 12 11 9 32 32 H 1.08998 * 109.47199 * 179.97438 * 16 15 13 33 33 H 1.09005 * 109.47115 * 60.00824 * 19 13 12 34 34 H 1.09000 * 109.47068 * 180.02562 * 19 13 12 35 35 H 1.09011 * 109.47004 * 300.00071 * 20 9 8 36 36 H 1.08997 * 109.47633 * 59.99860 * 20 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7622 -2.0025 1.5122 6 7 2.2973 -2.3902 2.6564 7 6 2.9107 -1.4845 3.3531 8 7 3.5302 -1.7057 4.5731 9 6 3.5223 -3.0452 5.1665 10 1 3.5871 -3.7930 4.3761 11 6 4.7194 -3.1930 6.1078 12 6 4.7116 -4.5920 6.7271 13 6 3.4154 -4.7940 7.5146 14 1 3.3505 -4.0463 8.3052 15 8 3.4078 -6.1008 8.0925 16 6 2.6800 -6.1897 9.3191 17 9 3.2469 -5.3249 10.2614 18 9 1.3468 -5.8286 9.0974 19 6 2.2184 -4.6460 6.5733 20 6 2.2262 -3.2464 5.9541 21 16 2.8510 0.0202 2.5435 22 1 -0.3934 0.4417 0.7649 23 1 1.7924 -0.5138 -0.8900 24 1 1.5614 2.4679 -1.2085 25 1 1.5878 2.4586 1.2242 26 1 1.2302 -2.6776 0.8584 27 1 3.9690 -0.9737 5.0341 28 1 5.6428 -3.0496 5.5466 29 1 4.6547 -2.4451 6.8982 30 1 4.7765 -5.3397 5.9365 31 1 5.5640 -4.6973 7.3980 32 1 2.7216 -7.2128 9.6929 33 1 2.2833 -5.3937 5.7827 34 1 1.2950 -4.7894 7.1344 35 1 2.1615 -2.4985 6.7445 36 1 1.3734 -3.1411 5.2835 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15100672_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:18 Heat of formation + Delta-G solvation = -141.283660 kcal Electronic energy + Delta-G solvation = -23180.150528 eV Core-core repulsion = 19234.876102 eV Total energy + Delta-G solvation = -3945.274425 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.084 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -50.08402 -48.19846 -40.99378 -40.18709 -38.39358 -37.75714 -35.36624 -31.96388 -31.58288 -29.90342 -26.76269 -26.20495 -24.64576 -23.87083 -23.17762 -21.46111 -20.71538 -19.77516 -19.29219 -18.74958 -18.65763 -18.27106 -17.17902 -16.73670 -16.40405 -16.16487 -15.85583 -15.75415 -15.58388 -15.15872 -15.02928 -14.93201 -14.61399 -14.42729 -14.24536 -13.94495 -13.72575 -13.43402 -13.26350 -12.94486 -12.91000 -12.47857 -12.41382 -12.25556 -12.00779 -11.98647 -11.68701 -11.24783 -10.97880 -10.85537 -10.28975 -10.21428 -8.74963 -5.02866 -0.06131 0.02325 0.66681 1.25638 1.54225 1.88277 1.96235 1.97187 2.19978 2.72334 3.38759 3.49340 3.52312 3.60821 3.71994 3.80900 3.91586 3.96630 4.01396 4.05744 4.15868 4.29820 4.37476 4.52330 4.57816 4.68721 4.71491 4.81808 4.96714 5.01204 5.04660 5.06766 5.17407 5.26565 5.59792 5.82759 6.16473 6.43262 7.01636 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.023 4.023 3 Si 0.724 3.276 4 C -0.306 4.306 5 C 0.105 3.895 6 N -0.577 5.577 7 C 0.317 3.683 8 N -0.681 5.681 9 C 0.163 3.837 10 H 0.077 0.923 11 C -0.116 4.116 12 C -0.106 4.106 13 C 0.075 3.925 14 H 0.074 0.926 15 O -0.388 6.388 16 C 0.398 3.602 17 F -0.219 7.219 18 F -0.220 7.220 19 C -0.135 4.135 20 C -0.119 4.119 21 S 0.112 5.888 22 H 0.385 0.615 23 H 0.135 0.865 24 H -0.276 1.276 25 H -0.266 1.266 26 H 0.177 0.823 27 H 0.425 0.575 28 H 0.092 0.908 29 H 0.085 0.915 30 H 0.075 0.925 31 H 0.087 0.913 32 H 0.206 0.794 33 H 0.070 0.930 34 H 0.067 0.933 35 H 0.070 0.930 36 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.678 0.848 2.141 5.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.136 4.136 3 Si 0.626 3.374 4 C -0.429 4.429 5 C -0.046 4.046 6 N -0.303 5.303 7 C -0.054 4.054 8 N -0.321 5.321 9 C 0.056 3.944 10 H 0.095 0.905 11 C -0.154 4.154 12 C -0.144 4.144 13 C 0.018 3.982 14 H 0.092 0.908 15 O -0.310 6.310 16 C 0.307 3.693 17 F -0.201 7.201 18 F -0.202 7.202 19 C -0.173 4.173 20 C -0.158 4.158 21 S 0.362 5.638 22 H 0.235 0.765 23 H 0.153 0.847 24 H -0.201 1.201 25 H -0.191 1.191 26 H 0.194 0.806 27 H 0.264 0.736 28 H 0.111 0.889 29 H 0.104 0.896 30 H 0.094 0.906 31 H 0.105 0.895 32 H 0.222 0.778 33 H 0.088 0.912 34 H 0.086 0.914 35 H 0.089 0.911 36 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 5.000 1.561 2.018 5.613 hybrid contribution -1.897 -0.322 0.291 1.946 sum 3.103 1.239 2.309 4.061 Atomic orbital electron populations 1.86588 1.18298 1.80276 1.49966 1.24279 0.82950 1.10454 0.95874 0.94366 0.90692 0.73155 0.79154 1.25609 1.14857 0.98119 1.04315 1.21455 0.97152 0.93753 0.92266 1.66491 1.19820 1.34651 1.09343 1.23945 0.95360 0.93573 0.92478 1.44162 1.58621 1.12487 1.16813 1.21009 0.94904 0.83260 0.95183 0.90492 1.21736 0.97778 0.97062 0.98829 1.21491 0.95648 0.97386 0.99852 1.22465 0.97012 0.83106 0.95582 0.90803 1.88437 1.72479 1.33157 1.36909 1.23851 0.72118 0.94847 0.78530 1.93043 1.85081 1.75331 1.66682 1.93040 1.38503 1.94130 1.94526 1.22045 0.98173 0.97692 0.99438 1.21810 0.98219 0.96412 0.99353 1.83881 1.54631 1.10363 1.14951 0.76530 0.84750 1.20147 1.19131 0.80583 0.73575 0.88944 0.89603 0.90615 0.89453 0.77756 0.91161 0.91442 0.91118 0.92643 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.53 12.88 -148.98 -1.92 -3.45 16 2 C -0.02 0.00 2.99 71.24 0.21 0.22 16 3 Si 0.72 -0.88 31.06 68.60 2.13 1.25 16 4 C -0.31 -0.47 5.73 24.57 0.14 -0.33 16 5 C 0.10 0.46 11.24 83.54 0.94 1.40 16 6 N -0.58 -3.60 9.90 -202.02 -2.00 -5.61 16 7 C 0.32 0.69 8.06 179.32 1.45 2.14 16 8 N -0.68 1.74 5.23 -330.40 -1.73 0.01 16 9 C 0.16 -0.35 2.58 44.99 0.12 -0.23 16 10 H 0.08 0.16 7.77 -2.38 -0.02 0.14 16 11 C -0.12 0.74 5.39 30.59 0.16 0.91 16 12 C -0.11 0.42 5.57 30.59 0.17 0.59 16 13 C 0.07 -0.06 2.40 30.60 0.07 0.01 16 14 H 0.07 -0.05 7.20 -2.38 -0.02 -0.07 16 15 O -0.39 -0.22 10.29 -148.98 -1.53 -1.75 16 16 C 0.40 -0.78 6.26 113.37 0.71 -0.07 16 17 F -0.22 -0.34 16.63 44.97 0.75 0.41 16 18 F -0.22 -0.51 15.46 44.97 0.70 0.19 16 19 C -0.14 -0.09 5.39 30.61 0.17 0.07 16 20 C -0.12 0.01 5.51 30.61 0.17 0.18 16 21 S 0.11 -0.05 20.59 -56.49 -1.16 -1.22 16 22 H 0.39 -0.87 8.70 -74.06 -0.64 -1.51 16 23 H 0.13 -0.31 7.96 -2.39 -0.02 -0.33 16 24 H -0.28 -1.39 7.11 99.48 0.71 -0.68 16 25 H -0.27 -0.64 7.11 99.48 0.71 0.06 16 26 H 0.18 0.48 8.06 -2.91 -0.02 0.46 16 27 H 0.42 -3.20 8.73 -92.71 -0.81 -4.01 16 28 H 0.09 -0.73 8.14 -2.38 -0.02 -0.75 16 29 H 0.09 -0.73 8.14 -2.38 -0.02 -0.75 16 30 H 0.08 -0.21 8.14 -2.38 -0.02 -0.23 16 31 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 32 H 0.21 -2.13 8.14 -2.39 -0.02 -2.14 16 33 H 0.07 0.16 8.14 -2.38 -0.02 0.14 16 34 H 0.07 0.19 6.50 -2.39 -0.02 0.18 16 35 H 0.07 -0.09 8.14 -2.38 -0.02 -0.11 16 36 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 Total: 0.00 -14.36 317.44 -0.75 -15.12 By element: Atomic # 1 Polarization: -9.53 SS G_CDS: -0.29 Total: -9.82 kcal Atomic # 6 Polarization: 0.57 SS G_CDS: 4.31 Total: 4.88 kcal Atomic # 7 Polarization: -1.87 SS G_CDS: -3.73 Total: -5.60 kcal Atomic # 8 Polarization: -1.75 SS G_CDS: -3.45 Total: -5.20 kcal Atomic # 9 Polarization: -0.85 SS G_CDS: 1.44 Total: 0.60 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: 2.13 Total: 1.25 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -1.16 Total: -1.22 kcal Total: -14.36 -0.75 -15.12 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.168 kcal (2) G-P(sol) polarization free energy of solvation -14.364 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.532 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.115 kcal (6) G-S(sol) free energy of system = (1) + (5) -141.284 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds