Wall clock time and date at job start Mon Mar 8 2021 06:13:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86303 * 109.47046 * 2 1 4 4 C 1.50697 * 109.47014 * 239.99739 * 2 1 3 5 5 C 1.37983 * 120.32365 * 120.00272 * 4 2 1 6 6 N 1.32013 * 120.90063 * 179.97438 * 5 4 2 7 7 C 1.32334 * 121.64531 * 359.97438 * 6 5 4 8 8 N 1.39139 * 119.71943 * 179.97438 * 7 6 5 9 9 C 1.46504 * 120.00049 * 359.97438 * 8 7 6 10 10 H 1.09001 * 109.46891 * 325.00474 * 9 8 7 11 11 C 1.53006 * 109.46883 * 85.00040 * 9 8 7 12 12 C 1.52997 * 109.47127 * 180.02562 * 11 9 8 13 13 C 1.53000 * 109.47060 * 300.00449 * 12 11 9 14 14 H 1.09001 * 109.47194 * 299.99650 * 13 12 11 15 15 O 1.42903 * 109.46726 * 180.02562 * 13 12 11 16 16 C 1.42902 * 113.99825 * 149.99984 * 15 13 12 17 17 F 1.39900 * 109.47156 * 299.99648 * 16 15 13 18 18 F 1.39900 * 109.47303 * 59.99744 * 16 15 13 19 19 C 1.52996 * 109.47328 * 60.00126 * 13 12 11 20 20 C 1.52997 * 109.47417 * 205.00126 * 9 8 7 21 21 C 1.39348 * 120.56573 * 0.25890 * 7 6 5 22 22 F 1.35099 * 120.47342 * 179.72395 * 21 7 6 23 23 C 1.38445 * 119.05284 * 359.49137 * 21 7 6 24 24 H 0.96701 * 113.99664 * 59.99887 * 1 2 3 25 25 H 1.08996 * 109.46817 * 119.99703 * 2 1 3 26 26 H 1.48500 * 109.99902 * 298.67702 * 3 2 1 27 27 H 1.48495 * 110.00126 * 59.99886 * 3 2 1 28 28 H 1.07997 * 119.55207 * 359.97438 * 5 4 2 29 29 H 0.97003 * 120.00327 * 180.02562 * 8 7 6 30 30 H 1.08998 * 109.46505 * 59.99948 * 11 9 8 31 31 H 1.08996 * 109.46884 * 300.00829 * 11 9 8 32 32 H 1.09002 * 109.47153 * 180.02562 * 12 11 9 33 33 H 1.09001 * 109.46832 * 60.00321 * 12 11 9 34 34 H 1.09003 * 109.47326 * 180.02562 * 16 15 13 35 35 H 1.08992 * 109.47554 * 59.99639 * 19 13 12 36 36 H 1.09004 * 109.47108 * 179.97438 * 19 13 12 37 37 H 1.09002 * 109.47045 * 60.00127 * 20 9 8 38 38 H 1.09001 * 109.47375 * 300.00052 * 20 9 8 39 39 H 1.08002 * 120.75858 * 180.24228 * 23 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7251 -0.0464 -2.1431 6 7 3.1718 -0.6578 -3.2245 7 6 2.8800 -1.9236 -3.4769 8 7 3.3719 -2.5283 -4.6294 9 6 4.2086 -1.7638 -5.5577 10 1 3.8684 -0.7286 -5.5852 11 6 5.6643 -1.8100 -5.0886 12 6 6.5380 -1.0111 -6.0577 13 6 6.4338 -1.6189 -7.4579 14 1 6.7742 -2.6541 -7.4308 15 8 7.2504 -0.8731 -8.3628 16 6 7.7774 -1.6466 -9.4426 17 9 8.5670 -2.6826 -8.9323 18 9 6.7234 -2.1870 -10.1871 19 6 4.9783 -1.5727 -7.9270 20 6 4.1045 -2.3723 -6.9576 21 6 2.0794 -2.6545 -2.6012 22 9 1.7782 -3.9451 -2.8636 23 6 1.6012 -2.0406 -1.4562 24 1 -0.3933 0.4417 -0.7651 25 1 1.7923 -0.5138 0.8900 26 1 1.5880 2.4585 -1.2243 27 1 1.5615 2.4679 1.2084 28 1 2.9845 0.9877 -1.9704 29 1 3.1603 -3.4559 -4.8186 30 1 6.0044 -2.8452 -5.0610 31 1 5.7384 -1.3766 -4.0912 32 1 7.5751 -1.0443 -5.7237 33 1 6.1977 0.0241 -6.0847 34 1 8.3859 -1.0086 -10.0836 35 1 4.6379 -0.5376 -7.9540 36 1 4.9042 -2.0054 -8.9247 37 1 3.0675 -2.3394 -7.2918 38 1 4.4447 -3.4075 -6.9302 39 1 0.9817 -2.5823 -0.7567 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15100672_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:13:25 Heat of formation + Delta-G solvation = -195.632929 kcal Electronic energy + Delta-G solvation = -27128.731159 eV Core-core repulsion = 22622.493750 eV Total energy + Delta-G solvation = -4506.237408 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.118 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.09846 -49.86951 -48.19946 -41.50803 -40.38147 -38.52368 -37.75662 -35.54248 -33.25116 -32.04490 -31.82388 -29.61498 -26.77456 -26.15845 -24.96197 -23.94218 -23.20547 -22.60899 -21.33292 -19.48308 -19.29210 -18.82941 -18.68036 -18.53456 -18.33549 -17.63253 -16.97006 -16.80429 -16.21737 -16.01686 -15.99535 -15.74437 -15.47176 -15.23600 -15.08991 -14.91304 -14.57891 -14.40340 -14.33109 -14.25967 -13.94934 -13.80910 -13.53431 -13.36696 -13.28315 -12.77250 -12.69960 -12.45993 -12.32394 -12.23123 -12.04177 -11.54261 -11.39108 -11.01696 -10.79193 -10.61382 -10.54227 -8.78634 -5.02318 -0.07293 0.11592 1.20808 1.53508 1.81596 1.91710 1.99922 2.54613 2.64068 3.03117 3.24079 3.32955 3.40693 3.47560 3.54458 3.56293 3.78778 3.82461 3.90016 3.90655 4.00986 4.02531 4.14204 4.24974 4.31712 4.41118 4.43684 4.57883 4.62864 4.70343 4.78478 4.90716 4.96583 4.99283 5.03301 5.11742 5.17002 5.40107 5.55618 5.93531 6.15588 6.34012 6.94339 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.061 4.061 3 Si 0.682 3.318 4 C -0.208 4.208 5 C 0.148 3.852 6 N -0.511 5.511 7 C 0.392 3.608 8 N -0.714 5.714 9 C 0.155 3.845 10 H 0.096 0.904 11 C -0.126 4.126 12 C -0.110 4.110 13 C 0.077 3.923 14 H 0.074 0.926 15 O -0.378 6.378 16 C 0.404 3.596 17 F -0.208 7.208 18 F -0.208 7.208 19 C -0.139 4.139 20 C -0.126 4.126 21 C -0.021 4.021 22 F -0.134 7.134 23 C -0.038 4.038 24 H 0.376 0.624 25 H 0.120 0.880 26 H -0.256 1.256 27 H -0.254 1.254 28 H 0.163 0.837 29 H 0.412 0.588 30 H 0.065 0.935 31 H 0.080 0.920 32 H 0.076 0.924 33 H 0.079 0.921 34 H 0.168 0.832 35 H 0.079 0.921 36 H 0.080 0.920 37 H 0.077 0.923 38 H 0.070 0.930 39 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.384 1.419 -0.652 2.850 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.582 3.418 4 C -0.214 4.214 5 C -0.009 4.009 6 N -0.228 5.228 7 C 0.154 3.846 8 N -0.346 5.346 9 C 0.050 3.950 10 H 0.114 0.886 11 C -0.165 4.165 12 C -0.148 4.148 13 C 0.020 3.980 14 H 0.092 0.908 15 O -0.300 6.300 16 C 0.312 3.688 17 F -0.190 7.190 18 F -0.190 7.190 19 C -0.177 4.177 20 C -0.164 4.164 21 C -0.047 4.047 22 F -0.113 7.113 23 C -0.064 4.064 24 H 0.224 0.776 25 H 0.138 0.862 26 H -0.181 1.181 27 H -0.178 1.178 28 H 0.180 0.820 29 H 0.249 0.751 30 H 0.083 0.917 31 H 0.098 0.902 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.184 0.816 35 H 0.097 0.903 36 H 0.099 0.901 37 H 0.095 0.905 38 H 0.089 0.911 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.905 2.609 -0.814 3.989 hybrid contribution -1.786 -1.725 -0.156 2.488 sum 1.119 0.884 -0.970 1.724 Atomic orbital electron populations 1.86613 1.17711 1.79924 1.49375 1.24826 0.83894 1.10778 0.97700 0.95142 0.91552 0.74284 0.80786 1.20863 1.04893 0.95116 1.00514 1.22346 0.91616 0.99157 0.87780 1.67318 1.26511 1.07291 1.21638 1.18433 0.89926 0.89067 0.87220 1.44664 1.54544 1.14657 1.20706 1.21036 0.89800 0.96988 0.87163 0.88609 1.21916 0.94110 1.00763 0.99682 1.21528 1.01121 1.00701 0.91429 1.22421 0.90063 0.95933 0.89563 0.90754 1.88452 1.66691 1.37023 1.37792 1.23211 0.80263 0.81258 0.84080 1.93070 1.74612 1.63127 1.88214 1.93061 1.60436 1.88078 1.77384 1.22099 0.93775 1.02118 0.99727 1.21782 1.00985 0.99997 0.93653 1.18010 1.06857 0.81028 0.98825 1.91493 1.92101 1.33750 1.93927 1.21280 0.96221 0.94279 0.94614 0.77584 0.86216 1.18079 1.17847 0.82014 0.75128 0.91652 0.90164 0.90512 0.90212 0.81566 0.90272 0.90103 0.90477 0.91145 0.83329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.18 12.78 -35.23 -0.45 -0.63 16 2 C -0.06 0.08 2.84 36.00 0.10 0.18 16 3 Si 0.68 -1.38 29.82 -169.99 -5.07 -6.45 16 4 C -0.21 0.11 5.40 -104.47 -0.56 -0.45 16 5 C 0.15 -0.06 9.84 -17.57 -0.17 -0.24 16 6 N -0.51 -0.54 9.20 -12.37 -0.11 -0.66 16 7 C 0.39 0.45 7.47 -154.86 -1.16 -0.71 16 8 N -0.71 0.26 5.23 -53.85 -0.28 -0.02 16 9 C 0.15 -0.16 2.47 -67.93 -0.17 -0.33 16 10 H 0.10 0.01 7.54 -51.93 -0.39 -0.38 16 11 C -0.13 0.14 5.51 -26.73 -0.15 0.00 16 12 C -0.11 0.12 5.57 -26.73 -0.15 -0.03 16 13 C 0.08 -0.04 2.40 -26.73 -0.06 -0.10 16 14 H 0.07 -0.01 7.20 -51.93 -0.37 -0.39 16 15 O -0.38 -0.06 10.29 -35.23 -0.36 -0.43 16 16 C 0.40 -0.42 6.26 101.05 0.63 0.22 16 17 F -0.21 -0.18 16.63 2.25 0.04 -0.14 16 18 F -0.21 -0.11 15.46 2.25 0.03 -0.07 16 19 C -0.14 0.15 5.40 -26.71 -0.14 0.00 16 20 C -0.13 0.22 5.39 -26.71 -0.14 0.08 16 21 C -0.02 -0.03 7.35 -39.09 -0.29 -0.32 16 22 F -0.13 -0.28 16.65 2.25 0.04 -0.24 16 23 C -0.04 -0.02 9.75 -39.26 -0.38 -0.40 16 24 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 25 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 26 H -0.26 0.04 7.11 56.52 0.40 0.44 16 27 H -0.25 -0.37 7.11 56.52 0.40 0.04 16 28 H 0.16 -0.42 4.88 -52.49 -0.26 -0.68 16 29 H 0.41 -0.52 8.07 -40.82 -0.33 -0.85 16 30 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 32 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 34 H 0.17 -0.79 8.14 -51.93 -0.42 -1.22 16 35 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 36 H 0.08 -0.03 6.50 -51.93 -0.34 -0.37 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 38 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 39 H 0.15 -0.04 8.06 -52.49 -0.42 -0.47 16 LS Contribution 329.96 15.07 4.97 4.97 Total: 0.00 -5.79 329.96 -8.55 -14.34 By element: Atomic # 1 Polarization: -3.87 SS G_CDS: -4.71 Total: -8.58 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -2.64 Total: -2.09 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -0.40 Total: -0.68 kcal Atomic # 8 Polarization: -0.24 SS G_CDS: -0.81 Total: -1.05 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.11 Total: -0.46 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.07 Total: -6.45 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -5.79 -8.55 -14.34 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15100672_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -181.294 kcal (2) G-P(sol) polarization free energy of solvation -5.791 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -195.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds