Wall clock time and date at job start Mon Mar 8 2021 06:39:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34231 * 116.99456 * 2 1 4 4 O 1.20825 * 120.00394 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99750 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.85116 * 311.19838 * 5 3 2 7 7 C 1.53778 * 113.69164 * 82.46649 * 5 3 2 8 8 C 1.53784 * 87.08221 * 139.99283 * 7 5 3 9 9 C 1.53002 * 113.69088 * 89.12893 * 8 7 5 10 10 N 1.46496 * 109.47316 * 69.94110 * 9 8 7 11 11 C 1.38406 * 119.99951 * 178.38257 * 10 9 8 12 12 N 1.32491 * 119.21926 * 359.72766 * 11 10 9 13 13 C 1.32275 * 120.74357 * 179.72173 * 12 11 10 14 14 C 1.38610 * 119.19369 * 0.54437 * 13 12 11 15 15 C 1.50692 * 120.71955 * 179.75378 * 14 13 12 16 16 O 1.42900 * 109.47323 * 244.97539 * 15 14 13 17 17 Si 1.86300 * 109.47257 * 4.97727 * 15 14 13 18 18 C 1.38604 * 118.55826 * 359.73094 * 14 13 12 19 19 N 1.32275 * 119.19691 * 359.97438 * 18 14 13 20 20 O 1.42904 * 113.61117 * 220.01800 * 8 7 5 21 21 C 1.42902 * 113.99826 * 160.40752 * 20 8 7 22 22 C 1.53777 * 87.07907 * 334.56369 * 8 7 5 23 23 H 1.09000 * 109.46534 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.46980 * 299.99480 * 1 2 3 25 25 H 1.08989 * 109.46947 * 60.00189 * 1 2 3 26 26 H 1.08999 * 113.61735 * 25.44529 * 7 5 3 27 27 H 1.09005 * 113.61251 * 254.54174 * 7 5 3 28 28 H 1.09004 * 109.46591 * 189.93930 * 9 8 7 29 29 H 1.08994 * 109.47232 * 309.93964 * 9 8 7 30 30 H 0.97004 * 120.00020 * 358.38038 * 10 9 8 31 31 H 1.07996 * 120.40600 * 180.25201 * 13 12 11 32 32 H 1.09009 * 109.47329 * 124.97390 * 15 14 13 33 33 H 0.96695 * 113.99767 * 59.99927 * 16 15 14 34 34 H 1.48497 * 110.00365 * 58.68016 * 17 15 14 35 35 H 1.48503 * 110.00395 * 180.02562 * 17 15 14 36 36 H 1.07999 * 120.39712 * 180.02562 * 18 14 13 37 37 H 1.08999 * 109.46821 * 185.03003 * 21 20 8 38 38 H 1.09001 * 109.46910 * 305.02890 * 21 20 8 39 39 H 1.08999 * 109.47076 * 65.02983 * 21 20 8 40 40 H 1.09008 * 113.60963 * 139.98128 * 22 8 7 41 41 H 1.08991 * 113.61879 * 270.88425 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0239 0.6363 0.7549 7 6 4.1924 1.1233 -1.3969 8 6 5.1819 2.2268 -0.9868 9 6 6.4452 1.6974 -0.3049 10 7 7.2709 0.9909 -1.2873 11 6 8.4875 0.4506 -0.9082 12 7 8.8926 0.5862 0.3459 13 6 10.0474 0.0772 0.7423 14 6 10.8406 -0.5942 -0.1749 15 6 12.1650 -1.1828 0.2380 16 8 13.2209 -0.5092 -0.4500 17 14 12.3904 -0.9765 2.0757 18 6 10.3891 -0.7129 -1.4800 19 7 9.2215 -0.1856 -1.8092 20 8 5.4649 3.1592 -2.0322 21 6 6.0033 4.4009 -1.5734 22 6 4.1076 2.7144 -0.0005 23 1 -0.3632 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8901 25 1 -0.3633 0.5138 -0.8899 26 1 3.5256 1.4144 -2.2085 27 1 4.6630 0.1539 -1.5614 28 1 7.0098 2.5315 0.1117 29 1 6.1660 1.0119 0.4952 30 1 6.9650 0.9017 -2.2036 31 1 10.3704 0.1874 1.7669 32 1 12.1857 -2.2433 -0.0138 33 1 13.2630 0.4404 -0.2726 34 1 11.2812 -1.6455 2.8018 35 1 13.6932 -1.5524 2.4956 36 1 10.9830 -1.2303 -2.2188 37 1 6.1069 5.0851 -2.4155 38 1 5.3328 4.8358 -0.8322 39 1 6.9806 4.2287 -1.1227 40 1 4.5098 3.0296 0.9624 41 1 3.4176 3.4404 -0.4303 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15102700_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:39:42 Heat of formation + Delta-G solvation = -62.424938 kcal Electronic energy + Delta-G solvation = -25704.292995 eV Core-core repulsion = 21781.177410 eV Total energy + Delta-G solvation = -3923.115585 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.32043 -41.96054 -40.66054 -38.18216 -37.65850 -36.90306 -36.40498 -34.70456 -32.63930 -29.87685 -28.56552 -28.25431 -26.94672 -26.27344 -25.96402 -25.13283 -23.09326 -22.08911 -20.31107 -19.39687 -19.18276 -18.62317 -18.16509 -18.00388 -17.47293 -16.92420 -16.73146 -16.58616 -16.38937 -16.05053 -15.92381 -15.58973 -15.44785 -15.30675 -14.60157 -14.49159 -14.29810 -14.16327 -14.04755 -13.65307 -13.33237 -13.19192 -12.99551 -12.81646 -12.72677 -12.24296 -12.20060 -11.86676 -11.81452 -11.77861 -11.59774 -11.45366 -11.39611 -10.74744 -10.60179 -10.02736 -9.13379 -5.12837 0.05779 0.15482 1.09958 1.21011 1.54871 1.62292 1.68905 1.91266 2.57235 2.82219 3.01338 3.06412 3.18913 3.27620 3.32803 3.41116 3.60731 3.69961 3.78109 3.86373 3.95226 4.13860 4.18498 4.19597 4.22425 4.29931 4.36058 4.43925 4.47696 4.49440 4.50627 4.57677 4.63325 4.71750 4.74644 4.77768 4.93688 5.17285 5.34386 5.72031 5.95130 6.03532 6.38826 6.50438 6.68796 7.27889 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.131 0.869 7 C -0.102 4.102 8 C 0.075 3.925 9 C 0.134 3.866 10 N -0.688 5.688 11 C 0.568 3.432 12 N -0.565 5.565 13 C 0.201 3.799 14 C -0.295 4.295 15 C -0.046 4.046 16 O -0.540 6.540 17 Si 0.680 3.320 18 C 0.225 3.775 19 N -0.567 5.567 20 O -0.363 6.363 21 C 0.027 3.973 22 C -0.133 4.133 23 H 0.104 0.896 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.103 0.897 27 H 0.093 0.907 28 H 0.079 0.921 29 H 0.083 0.917 30 H 0.420 0.580 31 H 0.167 0.833 32 H 0.116 0.884 33 H 0.379 0.621 34 H -0.255 1.255 35 H -0.251 1.251 36 H 0.170 0.830 37 H 0.089 0.911 38 H 0.048 0.952 39 H 0.044 0.956 40 H 0.089 0.911 41 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.503 0.903 2.342 2.560 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.128 4.128 6 H 0.149 0.851 7 C -0.139 4.139 8 C 0.034 3.966 9 C 0.009 3.991 10 N -0.325 5.325 11 C 0.212 3.788 12 N -0.287 5.287 13 C 0.033 3.967 14 C -0.303 4.303 15 C -0.158 4.158 16 O -0.346 6.346 17 Si 0.581 3.419 18 C 0.056 3.944 19 N -0.289 5.289 20 O -0.282 6.282 21 C -0.069 4.069 22 C -0.171 4.171 23 H 0.122 0.878 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.112 0.888 28 H 0.097 0.903 29 H 0.101 0.899 30 H 0.258 0.742 31 H 0.183 0.817 32 H 0.133 0.867 33 H 0.226 0.774 34 H -0.180 1.180 35 H -0.175 1.175 36 H 0.187 0.813 37 H 0.108 0.892 38 H 0.066 0.934 39 H 0.062 0.938 40 H 0.107 0.893 41 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.587 0.673 2.554 2.705 hybrid contribution 0.280 -0.618 -0.255 0.725 sum -0.307 0.055 2.299 2.320 Atomic orbital electron populations 1.23337 0.75799 1.04069 1.02774 1.86516 1.23826 1.33164 1.83776 1.23346 0.91395 0.81504 0.72228 1.90694 1.66875 1.36419 1.44844 1.22330 0.88142 1.00908 1.01461 0.85081 1.23017 0.96684 0.98880 0.95330 1.23087 0.92335 0.91468 0.89679 1.21537 0.89744 0.96946 0.90860 1.43903 1.16210 1.58550 1.13863 1.19338 0.87076 0.87262 0.85173 1.67900 1.17917 1.26191 1.16709 1.22748 0.87551 0.87612 0.98780 1.21709 1.01600 1.09574 0.97448 1.24699 0.83932 0.98377 1.08819 1.86514 1.50404 1.25734 1.71898 0.95025 0.81052 0.91276 0.74530 1.22847 0.88708 0.88811 0.94031 1.67984 1.08308 1.15927 1.36635 1.87985 1.83754 1.25407 1.31045 1.22798 0.97582 0.85402 1.01133 1.23553 0.97265 0.95354 1.00897 0.87799 0.91688 0.91679 0.87822 0.88830 0.90284 0.89903 0.74156 0.81692 0.86710 0.77375 1.17977 1.17527 0.81261 0.89209 0.93360 0.93757 0.89284 0.86823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.43 10.57 -39.26 -0.41 -0.85 16 3 C 0.47 0.72 7.49 36.01 0.27 0.99 16 4 O -0.50 -2.20 15.65 -18.75 -0.29 -2.49 16 5 C -0.11 0.15 3.91 -90.96 -0.36 -0.21 16 6 H 0.13 -0.41 7.60 -51.93 -0.39 -0.81 16 7 C -0.10 0.16 7.00 -25.92 -0.18 -0.02 16 8 C 0.07 -0.11 0.77 -89.81 -0.07 -0.18 16 9 C 0.13 -0.18 4.80 -4.04 -0.02 -0.20 16 10 N -0.69 -0.17 5.62 -62.31 -0.35 -0.52 16 11 C 0.57 1.18 8.43 -322.81 -2.72 -1.54 16 12 N -0.56 -0.87 9.59 -13.93 -0.13 -1.00 16 13 C 0.20 -0.06 9.92 -17.22 -0.17 -0.23 16 14 C -0.29 0.14 5.36 -104.35 -0.56 -0.42 16 15 C -0.05 0.07 2.83 36.00 0.10 0.17 16 16 O -0.54 0.51 12.85 -35.23 -0.45 0.05 16 17 Si 0.68 -1.51 29.88 -169.99 -5.08 -6.59 16 18 C 0.22 0.18 10.99 -17.23 -0.19 -0.01 16 19 N -0.57 -1.45 10.46 -13.93 -0.15 -1.60 16 20 O -0.36 -0.11 10.60 -35.23 -0.37 -0.48 16 21 C 0.03 -0.03 10.60 101.05 1.07 1.04 16 22 C -0.13 0.20 5.73 -25.92 -0.15 0.05 16 23 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 24 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 25 H 0.06 -0.04 8.13 -51.94 -0.42 -0.46 16 26 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 27 H 0.09 -0.21 8.10 -51.93 -0.42 -0.63 16 28 H 0.08 -0.08 7.12 -51.93 -0.37 -0.45 16 29 H 0.08 -0.15 7.30 -51.93 -0.38 -0.53 16 30 H 0.42 0.05 8.59 -40.82 -0.35 -0.30 16 31 H 0.17 -0.50 5.07 -52.49 -0.27 -0.76 16 32 H 0.12 -0.15 7.96 -51.92 -0.41 -0.56 16 33 H 0.38 -1.72 8.70 45.56 0.40 -1.33 16 34 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 35 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 36 H 0.17 -0.15 8.06 -52.49 -0.42 -0.57 16 37 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.05 -0.10 7.32 -51.93 -0.38 -0.48 16 39 H 0.04 -0.06 7.13 -51.93 -0.37 -0.43 16 40 H 0.09 -0.25 8.10 -51.92 -0.42 -0.67 16 41 H 0.11 0.02 7.44 -51.93 -0.39 -0.37 16 LS Contribution 346.95 15.07 5.23 5.23 Total: 0.00 -8.52 346.95 -9.41 -17.92 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -5.49 Total: -10.16 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -1.90 Total: 0.48 kcal Atomic # 7 Polarization: -2.49 SS G_CDS: -0.63 Total: -3.12 kcal Atomic # 8 Polarization: -2.23 SS G_CDS: -1.53 Total: -3.76 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.08 Total: -6.59 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -8.52 -9.41 -17.92 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15102700_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.502 kcal (2) G-P(sol) polarization free energy of solvation -8.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.923 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds