Wall clock time and date at job start Mon Mar 8 2021 06:39:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34223 * 117.00371 * 2 1 4 4 O 1.20830 * 119.99797 * 359.97438 * 3 2 1 5 5 C 1.50692 * 120.00391 * 180.02562 * 3 2 1 6 6 H 1.09002 * 112.85620 * 48.79736 * 5 3 2 7 7 C 1.53782 * 113.61762 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.08200 * 139.97823 * 7 5 3 9 9 C 1.53001 * 113.61401 * 89.12100 * 8 7 5 10 10 N 1.46495 * 109.47616 * 70.64627 * 9 8 7 11 11 C 1.38995 * 120.00057 * 175.92845 * 10 9 8 12 12 N 1.32399 * 119.70611 * 179.72295 * 11 10 9 13 13 C 1.31978 * 121.62157 * 179.97438 * 12 11 10 14 14 C 1.38022 * 120.85939 * 359.97438 * 13 12 11 15 15 C 1.50694 * 120.33543 * 180.02562 * 14 13 12 16 16 O 1.42900 * 109.46866 * 120.00301 * 15 14 13 17 17 Si 1.86305 * 109.47244 * 0.02562 * 15 14 13 18 18 C 1.38884 * 119.32619 * 0.02562 * 14 13 12 19 19 C 1.38297 * 118.50982 * 359.72996 * 18 14 13 20 20 O 1.42898 * 113.61210 * 219.93321 * 8 7 5 21 21 C 1.42899 * 114.00012 * 163.33033 * 20 8 7 22 22 C 1.53780 * 87.17588 * 334.52467 * 8 7 5 23 23 H 1.09004 * 109.47182 * 299.99980 * 1 2 3 24 24 H 1.08999 * 109.47233 * 60.00397 * 1 2 3 25 25 H 1.09006 * 109.47214 * 180.02562 * 1 2 3 26 26 H 1.09000 * 113.61541 * 25.42566 * 7 5 3 27 27 H 1.08997 * 113.69113 * 254.53644 * 7 5 3 28 28 H 1.09003 * 109.46360 * 310.64090 * 9 8 7 29 29 H 1.09002 * 109.46614 * 190.65142 * 9 8 7 30 30 H 0.97004 * 119.99815 * 355.64379 * 10 9 8 31 31 H 1.08001 * 119.56864 * 179.97438 * 13 12 11 32 32 H 1.09000 * 109.47265 * 240.00439 * 15 14 13 33 33 H 0.96701 * 113.99699 * 179.97438 * 16 15 14 34 34 H 1.48505 * 109.99648 * 60.00018 * 17 15 14 35 35 H 1.48494 * 109.99871 * 181.31749 * 17 15 14 36 36 H 1.08001 * 120.74640 * 179.97438 * 18 14 13 37 37 H 1.07997 * 120.45858 * 180.28659 * 19 18 14 38 38 H 1.09001 * 109.47431 * 176.44398 * 21 20 8 39 39 H 1.09001 * 109.47585 * 296.44771 * 21 20 8 40 40 H 1.09005 * 109.47049 * 56.44700 * 21 20 8 41 41 H 1.08997 * 113.61312 * 140.02631 * 22 8 7 42 42 H 1.08996 * 113.61174 * 270.93106 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0234 0.6363 -0.7566 7 6 4.1078 2.7141 -0.0011 8 6 5.1814 2.2269 0.9862 9 6 6.4442 1.6953 0.3053 10 7 7.1815 2.8098 -0.2949 11 6 8.4124 2.5833 -0.8997 12 7 9.0712 3.5939 -1.4452 13 6 10.2425 3.4219 -2.0287 14 6 10.8260 2.1726 -2.0904 15 6 12.1641 1.9898 -2.7589 16 8 13.1025 1.4733 -1.8131 17 14 12.7681 3.6319 -3.3989 18 6 10.1675 1.0858 -1.5300 19 6 8.9441 1.2976 -0.9209 20 8 5.4651 3.1608 2.0300 21 6 6.1587 2.5947 3.1437 22 6 4.1928 1.1236 1.3987 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3634 -1.0277 0.0005 26 1 3.4175 3.4405 0.4277 27 1 4.5107 3.0301 -0.9633 28 1 6.1656 0.9834 -0.4716 29 1 7.0737 1.1990 1.0440 30 1 6.8089 3.7051 -0.2740 31 1 10.7509 4.2697 -2.4635 32 1 12.0630 1.2909 -3.5892 33 1 13.9876 1.3299 -2.1753 34 1 12.9103 4.5933 -2.2760 35 1 14.0720 3.4598 -4.0883 36 1 10.6029 0.0981 -1.5656 37 1 8.4069 0.4758 -0.4710 38 1 6.3921 3.3793 3.8635 39 1 5.5302 1.8413 3.6185 40 1 7.0832 2.1315 2.7987 41 1 4.6642 0.1550 1.5654 42 1 3.5257 1.4159 2.2096 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15102700_13915762.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:39:46 Heat of formation + Delta-G solvation = -77.612924 kcal Electronic energy + Delta-G solvation = -25513.803586 eV Core-core repulsion = 21655.455311 eV Total energy + Delta-G solvation = -3858.348275 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.25259 -41.30255 -40.60106 -38.05674 -37.67736 -36.88238 -36.33860 -33.45865 -31.83417 -29.78292 -28.49050 -28.21736 -26.97368 -26.07728 -25.31028 -24.60008 -22.35695 -22.03159 -20.18100 -19.24967 -18.74117 -18.50052 -18.20867 -17.85983 -17.49637 -16.76097 -16.75130 -16.51884 -16.25744 -16.02941 -15.68720 -15.43666 -15.19566 -14.93243 -14.48285 -14.31550 -14.14045 -14.00002 -13.86361 -13.77226 -13.68241 -13.32285 -13.13165 -12.75496 -12.71320 -12.33898 -12.19216 -11.92564 -11.82159 -11.57869 -11.47755 -11.20755 -10.75767 -10.69170 -10.54358 -10.26713 -8.68366 -4.95106 0.29543 0.47893 1.10109 1.30762 1.59550 1.60686 1.92934 1.98136 2.63862 2.85022 3.04723 3.07900 3.21233 3.30869 3.39835 3.64836 3.81416 3.85876 3.93056 4.01765 4.11389 4.12720 4.13732 4.16770 4.21399 4.31697 4.33135 4.40267 4.40949 4.43572 4.46315 4.56889 4.66284 4.73848 4.74828 4.78190 4.96859 5.05763 5.31223 5.33956 5.52782 5.95421 6.03398 6.45002 6.56001 6.68622 7.20566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.500 6.500 5 C -0.109 4.109 6 H 0.131 0.869 7 C -0.100 4.100 8 C 0.078 3.922 9 C 0.123 3.877 10 N -0.716 5.716 11 C 0.408 3.592 12 N -0.536 5.536 13 C 0.160 3.840 14 C -0.189 4.189 15 C -0.060 4.060 16 O -0.538 6.538 17 Si 0.675 3.325 18 C -0.003 4.003 19 C -0.241 4.241 20 O -0.360 6.360 21 C 0.026 3.974 22 C -0.135 4.135 23 H 0.064 0.936 24 H 0.065 0.935 25 H 0.104 0.896 26 H 0.113 0.887 27 H 0.091 0.909 28 H 0.079 0.921 29 H 0.074 0.926 30 H 0.411 0.589 31 H 0.156 0.844 32 H 0.075 0.925 33 H 0.379 0.621 34 H -0.253 1.253 35 H -0.260 1.260 36 H 0.134 0.866 37 H 0.132 0.868 38 H 0.090 0.910 39 H 0.045 0.955 40 H 0.045 0.955 41 H 0.091 0.909 42 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.429 -4.774 -1.325 4.973 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.314 3.686 4 O -0.386 6.386 5 C -0.128 4.128 6 H 0.149 0.851 7 C -0.137 4.137 8 C 0.037 3.963 9 C -0.002 4.002 10 N -0.349 5.349 11 C 0.173 3.827 12 N -0.253 5.253 13 C 0.003 3.997 14 C -0.194 4.194 15 C -0.170 4.170 16 O -0.346 6.346 17 Si 0.576 3.424 18 C -0.029 4.029 19 C -0.266 4.266 20 O -0.279 6.279 21 C -0.070 4.070 22 C -0.173 4.173 23 H 0.083 0.917 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.131 0.869 27 H 0.110 0.890 28 H 0.097 0.903 29 H 0.092 0.908 30 H 0.248 0.752 31 H 0.172 0.828 32 H 0.092 0.908 33 H 0.227 0.773 34 H -0.178 1.178 35 H -0.185 1.185 36 H 0.152 0.848 37 H 0.149 0.851 38 H 0.108 0.892 39 H 0.064 0.936 40 H 0.063 0.937 41 H 0.110 0.890 42 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -1.087 -2.983 -0.779 3.270 hybrid contribution 1.011 -1.601 0.450 1.946 sum -0.076 -4.585 -0.330 4.597 Atomic orbital electron populations 1.23337 0.75796 1.04057 1.02796 1.86504 1.23823 1.33191 1.83837 1.23348 0.91407 0.81518 0.72337 1.90707 1.66867 1.36399 1.44671 1.22369 0.88157 1.01080 1.01202 0.85074 1.23061 0.96014 0.95021 0.99591 1.23013 0.92341 0.91211 0.89710 1.21619 0.91902 0.89456 0.97264 1.44215 1.17944 1.11436 1.61312 1.18335 0.86169 0.89215 0.89013 1.67159 1.09930 1.33142 1.15053 1.22150 0.89980 0.95116 0.92488 1.19917 0.97137 0.94941 1.07418 1.24514 0.89364 1.09008 0.94132 1.86589 1.23339 1.85712 1.38918 0.95225 0.85282 0.77444 0.84446 1.21151 0.92035 0.98922 0.90811 1.21409 0.99284 0.96660 1.09244 1.88021 1.77083 1.34689 1.28078 1.22800 0.95695 0.99909 0.88584 1.23553 0.97924 1.00261 0.95603 0.91717 0.91658 0.87789 0.86891 0.89034 0.90273 0.90792 0.75173 0.82760 0.90756 0.77329 1.17751 1.18500 0.84780 0.85051 0.89200 0.93614 0.93670 0.89007 0.87813 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.27 10.56 -39.24 -0.41 -0.69 16 3 C 0.47 0.60 7.49 36.00 0.27 0.87 16 4 O -0.50 -2.20 15.65 -18.75 -0.29 -2.50 16 5 C -0.11 0.19 3.91 -90.82 -0.36 -0.16 16 6 H 0.13 -0.51 7.60 -51.93 -0.39 -0.90 16 7 C -0.10 0.10 6.78 -25.92 -0.18 -0.08 16 8 C 0.08 -0.13 0.77 -89.81 -0.07 -0.20 16 9 C 0.12 -0.28 4.00 -4.04 -0.02 -0.30 16 10 N -0.72 -0.06 5.64 -60.42 -0.34 -0.40 16 11 C 0.41 0.81 7.65 -155.02 -1.19 -0.38 16 12 N -0.54 -1.84 10.39 -12.44 -0.13 -1.97 16 13 C 0.16 0.34 9.84 -17.57 -0.17 0.17 16 14 C -0.19 -0.30 5.43 -104.46 -0.57 -0.87 16 15 C -0.06 0.00 2.83 36.00 0.10 0.11 16 16 O -0.54 -0.59 12.75 -35.23 -0.45 -1.04 16 17 Si 0.67 -0.49 29.82 -169.99 -5.07 -5.56 16 18 C 0.00 0.00 9.77 -39.32 -0.38 -0.39 16 19 C -0.24 -0.19 9.31 -39.22 -0.37 -0.55 16 20 O -0.36 -0.16 10.59 -35.23 -0.37 -0.53 16 21 C 0.03 -0.04 10.62 101.05 1.07 1.04 16 22 C -0.14 0.35 6.25 -25.77 -0.16 0.19 16 23 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 24 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 25 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 26 H 0.11 0.11 7.44 -51.93 -0.39 -0.27 16 27 H 0.09 -0.14 8.10 -51.93 -0.42 -0.56 16 28 H 0.08 -0.29 7.26 -51.93 -0.38 -0.67 16 29 H 0.07 -0.20 6.43 -51.93 -0.33 -0.53 16 30 H 0.41 0.27 8.59 -40.82 -0.35 -0.08 16 31 H 0.16 0.02 4.88 -52.49 -0.26 -0.23 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 33 H 0.38 -1.08 8.74 45.56 0.40 -0.68 16 34 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 35 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 36 H 0.13 -0.03 8.06 -52.49 -0.42 -0.46 16 37 H 0.13 -0.19 6.70 -52.49 -0.35 -0.55 16 38 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.05 -0.11 7.66 -51.93 -0.40 -0.51 16 40 H 0.04 -0.08 6.68 -51.93 -0.35 -0.42 16 41 H 0.09 -0.40 8.10 -51.93 -0.42 -0.82 16 42 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 LS Contribution 349.68 15.07 5.27 5.27 Total: 0.00 -8.68 349.68 -8.52 -17.20 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -5.78 Total: -10.26 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -0.94 Total: 0.49 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: -0.47 Total: -2.38 kcal Atomic # 8 Polarization: -3.23 SS G_CDS: -1.53 Total: -4.76 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.07 Total: -5.56 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -8.68 -8.52 -17.20 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15102700_13915762.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.414 kcal (2) G-P(sol) polarization free energy of solvation -8.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.524 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds