Wall clock time and date at job start Mon Mar 8 2021 06:39:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34223 * 117.00032 * 2 1 4 4 O 1.20826 * 120.00045 * 359.97438 * 3 2 1 5 5 C 1.50706 * 119.99830 * 180.02562 * 3 2 1 6 6 H 1.09003 * 112.84685 * 311.19559 * 5 3 2 7 7 C 1.53781 * 113.61491 * 82.50039 * 5 3 2 8 8 C 1.53782 * 87.08083 * 139.98274 * 7 5 3 9 9 C 1.52996 * 113.61479 * 89.11650 * 8 7 5 10 10 N 1.46496 * 109.47286 * 77.50517 * 9 8 7 11 11 C 1.38607 * 120.00024 * 175.28279 * 10 9 8 12 12 N 1.29691 * 124.94892 * 0.02562 * 11 10 9 13 13 C 1.32119 * 116.86311 * 179.97438 * 12 11 10 14 14 C 1.33324 * 114.58401 * 0.02562 * 13 12 11 15 15 C 1.50699 * 125.95438 * 180.02562 * 14 13 12 16 16 O 1.42901 * 109.47172 * 299.99372 * 15 14 13 17 17 Si 1.86301 * 109.47380 * 179.97438 * 15 14 13 18 18 S 1.70964 * 124.95043 * 179.97438 * 11 10 9 19 19 O 1.42902 * 113.68954 * 220.01314 * 8 7 5 20 20 C 1.42901 * 113.99975 * 164.92538 * 19 8 7 21 21 C 1.53777 * 113.61368 * 180.02562 * 5 3 2 22 22 H 1.09004 * 109.46990 * 59.99943 * 1 2 3 23 23 H 1.08996 * 109.47468 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.47190 * 300.00396 * 1 2 3 25 25 H 1.08996 * 113.61278 * 25.43516 * 7 5 3 26 26 H 1.09002 * 113.61379 * 254.53197 * 7 5 3 27 27 H 1.08999 * 109.47430 * 317.50058 * 9 8 7 28 28 H 1.09001 * 109.47057 * 197.50582 * 9 8 7 29 29 H 0.96996 * 119.99781 * 355.28452 * 10 9 8 30 30 H 1.08000 * 122.70896 * 179.97438 * 13 12 11 31 31 H 1.08997 * 109.47013 * 59.99278 * 15 14 13 32 32 H 0.96698 * 113.99815 * 300.00498 * 16 15 14 33 33 H 1.48495 * 110.00197 * 179.97438 * 17 15 14 34 34 H 1.48507 * 109.99778 * 301.31807 * 17 15 14 35 35 H 1.08996 * 109.47114 * 184.19919 * 20 19 8 36 36 H 1.08999 * 109.46857 * 304.19521 * 20 19 8 37 37 H 1.08993 * 109.47507 * 64.19257 * 20 19 8 38 38 H 1.08998 * 113.61956 * 105.46990 * 21 5 3 39 39 H 1.09006 * 113.68804 * 334.57282 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0240 0.6360 0.7550 7 6 4.1907 1.1236 -1.3978 8 6 5.1808 2.2268 -0.9886 9 6 6.4440 1.6951 -0.3086 10 7 7.3505 1.1482 -1.3213 11 6 8.6077 0.6950 -0.9537 12 7 9.0787 0.7092 0.2546 13 6 10.3004 0.2361 0.4247 14 6 10.8879 -0.1968 -0.6911 15 6 12.2723 -0.7838 -0.7917 16 8 13.2306 0.1763 -0.3423 17 14 12.6284 -1.2348 -2.5639 18 16 9.7632 0.0347 -2.0270 19 8 5.4637 3.1606 -2.0327 20 6 6.0968 4.3604 -1.5836 21 6 4.1079 2.7141 0.0001 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 3.5227 1.4151 -2.2083 26 1 4.6609 0.1543 -1.5634 27 1 6.1735 0.9109 0.3984 28 1 6.9402 2.5075 0.2224 29 1 7.0707 1.1033 -2.2489 30 1 10.7845 0.2034 1.3896 31 1 12.3341 -1.6772 -0.1703 32 1 13.2316 0.9986 -0.8510 33 1 13.9910 -1.8142 -2.6766 34 1 11.6196 -2.2090 -3.0526 35 1 6.2102 5.0472 -2.4224 36 1 5.4846 4.8273 -0.8120 37 1 7.0782 4.1220 -1.1739 38 1 4.5114 3.0284 0.9626 39 1 3.4181 3.4417 -0.4277 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15102700_15704118.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:39:49 Heat of formation + Delta-G solvation = -72.371635 kcal Electronic energy + Delta-G solvation = -24054.547315 eV Core-core repulsion = 20285.578566 eV Total energy + Delta-G solvation = -3768.968749 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.102 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.23982 -40.89970 -40.42683 -37.97930 -37.67806 -36.90283 -36.28548 -31.56171 -29.94366 -28.64312 -28.26953 -26.97228 -26.34514 -25.66673 -24.18220 -22.16357 -20.88869 -20.49081 -19.58882 -19.07841 -18.17470 -18.06157 -17.49057 -17.31296 -16.80653 -16.63376 -16.33436 -16.17465 -15.96224 -15.75379 -15.56430 -15.32676 -14.80132 -14.54069 -14.29190 -14.14259 -13.95108 -13.63462 -13.35962 -13.05568 -12.88377 -12.80826 -12.71056 -12.34195 -12.20995 -12.02593 -11.82307 -11.63905 -11.45923 -11.29603 -10.83094 -10.75103 -10.26243 -10.15074 -8.76420 -5.12830 -0.03306 0.02065 0.69627 1.09163 1.26519 1.58769 1.61456 1.91061 1.97887 2.03192 2.58735 3.01441 3.11580 3.22914 3.25905 3.44370 3.71295 3.82475 3.93687 3.94395 4.13131 4.18788 4.21607 4.28559 4.34448 4.41667 4.46843 4.48379 4.48708 4.56734 4.59792 4.71308 4.74802 4.75730 4.91190 5.05984 5.33539 5.74089 5.93185 6.05050 6.52453 6.67900 6.99067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.473 3.527 4 O -0.501 6.501 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.101 4.101 8 C 0.075 3.925 9 C 0.131 3.869 10 N -0.686 5.686 11 C 0.325 3.675 12 N -0.552 5.552 13 C 0.119 3.881 14 C -0.308 4.308 15 C -0.010 4.010 16 O -0.537 6.537 17 Si 0.655 3.345 18 S 0.092 5.908 19 O -0.364 6.364 20 C 0.027 3.973 21 C -0.133 4.133 22 H 0.064 0.936 23 H 0.104 0.896 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.093 0.907 27 H 0.082 0.918 28 H 0.080 0.920 29 H 0.420 0.580 30 H 0.176 0.824 31 H 0.121 0.879 32 H 0.380 0.620 33 H -0.236 1.236 34 H -0.241 1.241 35 H 0.090 0.910 36 H 0.047 0.953 37 H 0.045 0.955 38 H 0.088 0.912 39 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.527 0.377 -1.958 2.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.388 6.388 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.139 4.139 8 C 0.035 3.965 9 C 0.005 3.995 10 N -0.326 5.326 11 C -0.045 4.045 12 N -0.278 5.278 13 C -0.031 4.031 14 C -0.430 4.430 15 C -0.124 4.124 16 O -0.342 6.342 17 Si 0.555 3.445 18 S 0.341 5.659 19 O -0.282 6.282 20 C -0.069 4.069 21 C -0.171 4.171 22 H 0.083 0.917 23 H 0.122 0.878 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.112 0.888 27 H 0.100 0.900 28 H 0.098 0.902 29 H 0.258 0.742 30 H 0.193 0.807 31 H 0.138 0.862 32 H 0.227 0.773 33 H -0.159 1.159 34 H -0.165 1.165 35 H 0.108 0.892 36 H 0.066 0.934 37 H 0.064 0.936 38 H 0.106 0.894 39 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.906 -0.397 -2.808 2.977 hybrid contribution -0.211 0.012 1.399 1.415 sum -1.117 -0.385 -1.409 1.839 Atomic orbital electron populations 1.23339 0.75789 1.04076 1.02777 1.86512 1.23830 1.33162 1.83776 1.23345 0.91395 0.81509 0.72247 1.90696 1.66872 1.36425 1.44821 1.22330 0.88164 1.00941 1.01413 0.85046 1.23024 0.96708 0.98759 0.95364 1.23102 0.92380 0.91345 0.89706 1.21619 0.88279 0.99185 0.90465 1.43764 1.10646 1.66943 1.11259 1.23699 0.91896 0.96419 0.92515 1.66497 1.14758 1.27613 1.18949 1.21307 0.88106 0.94520 0.99214 1.25592 1.03496 1.19117 0.94836 1.24107 0.83257 0.94144 1.10920 1.86511 1.56854 1.29668 1.61204 0.94968 0.82837 0.88573 0.78123 1.84023 1.08507 1.61358 1.11976 1.87967 1.80028 1.28429 1.31801 1.22797 0.96563 0.86379 1.01199 1.23571 0.97312 0.95352 1.00874 0.91684 0.87785 0.91688 0.87824 0.88814 0.89995 0.90217 0.74196 0.80723 0.86152 0.77265 1.15911 1.16473 0.89169 0.93428 0.93637 0.89371 0.86821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.36 10.57 -39.24 -0.41 -0.78 16 3 C 0.47 0.65 7.48 36.01 0.27 0.92 16 4 O -0.50 -2.15 15.65 -18.75 -0.29 -2.45 16 5 C -0.11 0.17 3.91 -90.96 -0.36 -0.18 16 6 H 0.13 -0.43 7.62 -51.93 -0.40 -0.83 16 7 C -0.10 0.22 7.05 -25.92 -0.18 0.03 16 8 C 0.08 -0.14 0.84 -89.78 -0.08 -0.22 16 9 C 0.13 -0.22 4.83 -4.05 -0.02 -0.24 16 10 N -0.69 0.75 5.60 -62.30 -0.35 0.40 16 11 C 0.33 0.26 8.09 -87.68 -0.71 -0.45 16 12 N -0.55 -1.32 10.14 -15.21 -0.15 -1.47 16 13 C 0.12 0.18 11.22 -19.14 -0.21 -0.03 16 14 C -0.31 -0.15 5.74 -36.02 -0.21 -0.35 16 15 C -0.01 0.00 2.99 36.01 0.11 0.11 16 16 O -0.54 -0.03 12.87 -35.23 -0.45 -0.48 16 17 Si 0.65 -0.51 31.05 -169.99 -5.28 -5.79 16 18 S 0.09 -0.02 20.57 -107.50 -2.21 -2.23 16 19 O -0.36 0.17 10.34 -35.23 -0.36 -0.19 16 20 C 0.03 -0.04 10.56 101.05 1.07 1.02 16 21 C -0.13 0.20 5.96 -25.90 -0.15 0.05 16 22 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 23 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 24 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 25 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 26 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 27 H 0.08 -0.15 7.31 -51.93 -0.38 -0.53 16 28 H 0.08 -0.07 7.35 -51.93 -0.38 -0.45 16 29 H 0.42 -0.92 8.45 -40.82 -0.34 -1.26 16 30 H 0.18 0.09 8.06 -52.49 -0.42 -0.33 16 31 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 32 H 0.38 -1.34 8.70 45.56 0.40 -0.94 16 33 H -0.24 -0.44 7.11 56.52 0.40 -0.04 16 34 H -0.24 -0.34 7.11 56.52 0.40 0.06 16 35 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.05 -0.10 7.49 -51.93 -0.39 -0.49 16 37 H 0.05 -0.07 7.15 -51.93 -0.37 -0.44 16 38 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 39 H 0.11 0.02 7.44 -51.93 -0.39 -0.37 16 LS Contribution 344.60 15.07 5.19 5.19 Total: 0.00 -7.42 344.60 -8.97 -16.39 By element: Atomic # 1 Polarization: -5.06 SS G_CDS: -5.24 Total: -10.30 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: 0.59 Total: 1.70 kcal Atomic # 7 Polarization: -0.57 SS G_CDS: -0.50 Total: -1.07 kcal Atomic # 8 Polarization: -2.37 SS G_CDS: -1.53 Total: -3.89 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.28 Total: -5.79 kcal Atomic # 16 Polarization: -0.02 SS G_CDS: -2.21 Total: -2.23 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -7.42 -8.97 -16.39 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15102700_15704118.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.982 kcal (2) G-P(sol) polarization free energy of solvation -7.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.400 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.971 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds