Wall clock time and date at job start Mon Mar 8 2021 06:39:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34233 * 116.99898 * 2 1 4 4 O 1.20828 * 119.99775 * 0.02562 * 3 2 1 5 5 C 1.50704 * 119.99921 * 179.97438 * 3 2 1 6 6 H 1.08996 * 112.85323 * 309.66858 * 5 3 2 7 7 C 1.53777 * 113.61153 * 80.86594 * 5 3 2 8 8 C 1.54051 * 86.98684 * 140.01785 * 7 5 3 9 9 C 1.52992 * 113.61434 * 89.11299 * 8 7 5 10 10 N 1.46498 * 109.47198 * 202.31002 * 9 8 7 11 11 C 1.39148 * 120.00225 * 184.95485 * 10 9 8 12 12 N 1.32342 * 119.71583 * 359.97438 * 11 10 9 13 13 C 1.32007 * 121.64335 * 179.97438 * 12 11 10 14 14 C 1.37977 * 120.90762 * 359.97438 * 13 12 11 15 15 C 1.50701 * 120.33179 * 179.97438 * 14 13 12 16 16 O 1.42901 * 109.46791 * 119.99919 * 15 14 13 17 17 Si 1.86302 * 109.46700 * 0.02562 * 15 14 13 18 18 C 1.38912 * 119.34415 * 0.02562 * 14 13 12 19 19 C 1.38440 * 118.48335 * 359.74310 * 18 14 13 20 20 F 1.35105 * 120.47205 * 180.26908 * 19 18 14 21 21 O 1.42899 * 113.69758 * 220.01296 * 8 7 5 22 22 C 1.42906 * 113.99743 * 283.03488 * 21 8 7 23 23 C 1.53780 * 113.61102 * 178.47051 * 5 3 2 24 24 H 1.08999 * 109.47438 * 299.99997 * 1 2 3 25 25 H 1.09001 * 109.47286 * 60.00412 * 1 2 3 26 26 H 1.09003 * 109.46637 * 180.02562 * 1 2 3 27 27 H 1.08996 * 113.61581 * 254.60672 * 7 5 3 28 28 H 1.09000 * 113.61854 * 25.51400 * 7 5 3 29 29 H 1.09005 * 109.47445 * 322.30636 * 9 8 7 30 30 H 1.09002 * 109.47202 * 82.31010 * 9 8 7 31 31 H 0.97002 * 120.00364 * 4.95646 * 10 9 8 32 32 H 1.08006 * 119.54226 * 179.97438 * 13 12 11 33 33 H 1.08996 * 109.47114 * 240.00250 * 15 14 13 34 34 H 0.96696 * 114.00438 * 300.00048 * 16 15 14 35 35 H 1.48503 * 109.99487 * 179.97438 * 17 15 14 36 36 H 1.48495 * 109.99862 * 301.31712 * 17 15 14 37 37 H 1.08005 * 120.75478 * 180.02562 * 18 14 13 38 38 H 1.09000 * 109.46878 * 294.74470 * 22 21 8 39 39 H 1.08998 * 109.46868 * 54.74849 * 22 21 8 40 40 H 1.08996 * 109.46877 * 174.75089 * 22 21 8 41 41 H 1.08999 * 113.62066 * 334.48640 * 23 5 3 42 42 H 1.09003 * 113.61730 * 105.39062 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0223 0.6569 0.7740 7 6 4.1937 1.0835 -1.3903 8 6 5.1841 2.1996 -1.0076 9 6 6.4449 1.6871 -0.3088 10 7 7.0466 2.7719 0.4704 11 6 8.2644 2.5740 1.1138 12 7 8.8740 1.4032 1.0184 13 6 10.0303 1.1740 1.6126 14 6 10.6499 2.1546 2.3597 15 6 11.9696 1.8787 3.0331 16 8 12.9552 2.7883 2.5398 17 14 12.4999 0.1307 2.6669 18 6 10.0446 3.3985 2.4861 19 6 8.8346 3.6119 1.8481 20 9 8.2134 4.8082 1.9396 21 8 5.4706 3.1043 -2.0760 22 6 6.3772 2.5843 -3.0506 23 6 4.1077 2.7138 -0.0371 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 4.6631 0.1094 -1.5272 28 1 3.5280 1.3527 -2.2104 29 1 6.1827 0.8642 0.3563 30 1 7.1577 1.3376 -1.0558 31 1 6.5961 3.6283 0.5379 32 1 10.4978 0.2055 1.5124 33 1 11.8621 2.0082 4.1099 34 1 13.1035 2.7285 1.5862 35 1 13.8005 -0.1537 3.3249 36 1 11.4682 -0.8239 3.1460 37 1 10.5096 4.1828 3.0652 38 1 7.3538 2.4291 -2.5921 39 1 5.9984 1.6349 -3.4290 40 1 6.4708 3.2923 -3.8740 41 1 3.4186 3.4280 -0.4878 42 1 4.5078 3.0550 0.9177 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15102700_17656566.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:39:56 Heat of formation + Delta-G solvation = -122.727624 kcal Electronic energy + Delta-G solvation = -28180.860729 eV Core-core repulsion = 23851.102159 eV Total energy + Delta-G solvation = -4329.758570 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.136 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -49.86687 -42.23105 -41.40759 -40.62071 -38.15101 -37.67763 -36.90364 -36.33491 -33.27389 -31.93123 -29.76122 -28.54585 -28.17816 -27.07165 -26.22204 -25.67473 -24.37076 -22.90584 -22.04965 -20.25831 -19.51281 -19.03229 -18.57193 -18.33365 -18.04508 -17.58798 -17.47723 -17.04326 -16.79876 -16.70013 -16.28371 -16.09741 -15.96272 -15.80939 -15.40730 -15.28690 -14.94204 -14.50935 -14.37042 -14.28625 -14.01771 -13.83960 -13.71120 -13.47269 -13.31367 -13.12663 -12.76297 -12.65796 -12.63670 -12.18837 -12.10434 -11.81070 -11.63361 -11.43600 -11.41621 -10.76185 -10.73134 -10.66779 -10.48668 -8.80891 -5.11984 -0.09612 0.09412 1.11828 1.19762 1.54651 1.60524 1.81552 1.90631 2.52599 2.62599 2.99339 3.05336 3.11199 3.15136 3.32529 3.36861 3.42673 3.55851 3.81247 3.82290 3.95431 3.97917 4.14110 4.17867 4.22368 4.28515 4.33046 4.38655 4.42197 4.45355 4.47785 4.49922 4.58000 4.67135 4.70888 4.73300 4.77365 4.94761 4.96918 5.30512 5.34981 5.84325 6.01293 6.11430 6.49910 6.69776 6.89667 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.500 6.500 5 C -0.108 4.108 6 H 0.131 0.869 7 C -0.133 4.133 8 C 0.074 3.926 9 C 0.125 3.875 10 N -0.712 5.712 11 C 0.390 3.610 12 N -0.513 5.513 13 C 0.147 3.853 14 C -0.209 4.209 15 C -0.055 4.055 16 O -0.540 6.540 17 Si 0.686 3.314 18 C -0.038 4.038 19 C -0.017 4.017 20 F -0.132 7.132 21 O -0.362 6.362 22 C 0.025 3.975 23 C -0.101 4.101 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.104 0.896 27 H 0.092 0.908 28 H 0.103 0.897 29 H 0.081 0.919 30 H 0.083 0.917 31 H 0.417 0.583 32 H 0.163 0.837 33 H 0.116 0.884 34 H 0.380 0.620 35 H -0.251 1.251 36 H -0.254 1.254 37 H 0.150 0.850 38 H 0.046 0.954 39 H 0.046 0.954 40 H 0.089 0.911 41 H 0.113 0.887 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.343 -4.294 -2.743 5.269 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.387 6.387 5 C -0.127 4.127 6 H 0.149 0.851 7 C -0.171 4.171 8 C 0.034 3.966 9 C 0.001 3.999 10 N -0.346 5.346 11 C 0.151 3.849 12 N -0.231 5.231 13 C -0.010 4.010 14 C -0.214 4.214 15 C -0.167 4.167 16 O -0.346 6.346 17 Si 0.588 3.412 18 C -0.064 4.064 19 C -0.044 4.044 20 F -0.111 7.111 21 O -0.280 6.280 22 C -0.071 4.071 23 C -0.138 4.138 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.110 0.890 28 H 0.121 0.879 29 H 0.099 0.901 30 H 0.101 0.899 31 H 0.255 0.745 32 H 0.180 0.820 33 H 0.133 0.867 34 H 0.227 0.773 35 H -0.176 1.176 36 H -0.179 1.179 37 H 0.168 0.832 38 H 0.065 0.935 39 H 0.065 0.935 40 H 0.108 0.892 41 H 0.131 0.869 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.742 -5.209 -2.397 5.782 hybrid contribution -0.377 1.396 0.917 1.712 sum 0.365 -3.813 -1.480 4.106 Atomic orbital electron populations 1.23335 0.75823 1.04051 1.02777 1.86509 1.23799 1.33170 1.83830 1.23359 0.91404 0.81513 0.72282 1.90702 1.66874 1.36409 1.44748 1.22294 0.88101 1.00864 1.01474 0.85112 1.23535 0.97812 1.00222 0.95525 1.23146 0.92729 0.91590 0.89148 1.21574 0.93400 0.89765 0.95144 1.44378 1.19573 1.16833 1.53825 1.18397 0.87475 0.88889 0.90096 1.67289 1.11348 1.19326 1.25100 1.22327 0.89641 0.98225 0.90810 1.20938 1.00390 0.94955 1.05151 1.24864 0.85798 1.05678 1.00330 1.86513 1.57998 1.61571 1.28469 0.94844 0.80902 0.74209 0.91274 1.21288 0.91569 0.97829 0.95695 1.17992 0.96032 0.82766 1.07565 1.91507 1.81907 1.42514 1.95179 1.88027 1.65159 1.40389 1.34463 1.22817 0.92661 0.99946 0.91705 1.23062 0.96171 0.95178 0.99436 0.91704 0.91697 0.87790 0.88972 0.87864 0.90069 0.89880 0.74518 0.82028 0.86698 0.77285 1.17605 1.17857 0.83236 0.93517 0.93504 0.89224 0.86866 0.89398 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.42 10.57 -39.26 -0.41 -0.83 16 3 C 0.47 0.80 7.48 36.01 0.27 1.07 16 4 O -0.50 -2.36 15.66 -18.75 -0.29 -2.66 16 5 C -0.11 0.13 3.90 -90.96 -0.35 -0.23 16 6 H 0.13 -0.38 7.65 -51.93 -0.40 -0.78 16 7 C -0.13 0.27 6.64 -25.78 -0.17 0.10 16 8 C 0.07 -0.10 0.92 -89.67 -0.08 -0.18 16 9 C 0.13 -0.19 4.83 -4.05 -0.02 -0.21 16 10 N -0.71 0.17 5.40 -60.34 -0.33 -0.16 16 11 C 0.39 0.41 7.49 -154.85 -1.16 -0.75 16 12 N -0.51 -0.42 9.57 -12.36 -0.12 -0.54 16 13 C 0.15 -0.10 9.84 -17.57 -0.17 -0.28 16 14 C -0.21 0.15 5.40 -104.47 -0.56 -0.41 16 15 C -0.06 0.08 2.84 36.01 0.10 0.18 16 16 O -0.54 0.45 12.78 -35.23 -0.45 0.00 16 17 Si 0.69 -1.62 29.82 -169.99 -5.07 -6.69 16 18 C -0.04 -0.01 9.75 -39.26 -0.38 -0.40 16 19 C -0.02 -0.02 7.35 -39.10 -0.29 -0.31 16 20 F -0.13 -0.31 16.65 2.25 0.04 -0.27 16 21 O -0.36 -0.18 10.65 -35.23 -0.38 -0.55 16 22 C 0.02 -0.04 10.34 101.05 1.04 1.01 16 23 C -0.10 0.07 6.51 -25.92 -0.17 -0.10 16 24 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 26 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 27 H 0.09 -0.33 8.10 -51.93 -0.42 -0.75 16 28 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 29 H 0.08 -0.16 7.34 -51.93 -0.38 -0.55 16 30 H 0.08 -0.11 6.37 -51.93 -0.33 -0.44 16 31 H 0.42 -0.14 7.23 -40.82 -0.30 -0.43 16 32 H 0.16 -0.48 4.88 -52.48 -0.26 -0.74 16 33 H 0.12 -0.12 7.96 -51.93 -0.41 -0.54 16 34 H 0.38 -1.75 8.70 45.56 0.40 -1.36 16 35 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 36 H -0.25 0.06 7.11 56.52 0.40 0.46 16 37 H 0.15 -0.05 8.06 -52.48 -0.42 -0.47 16 38 H 0.05 -0.07 6.69 -51.93 -0.35 -0.42 16 39 H 0.05 -0.12 7.83 -51.93 -0.41 -0.52 16 40 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 41 H 0.11 0.13 7.46 -51.93 -0.39 -0.25 16 42 H 0.09 -0.12 7.37 -51.93 -0.38 -0.50 16 LS Contribution 355.42 15.07 5.36 5.36 Total: 0.00 -7.87 355.42 -7.89 -15.76 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -5.35 Total: -9.95 kcal Atomic # 6 Polarization: 1.41 SS G_CDS: -0.88 Total: 0.53 kcal Atomic # 7 Polarization: -0.25 SS G_CDS: -0.44 Total: -0.69 kcal Atomic # 8 Polarization: -2.51 SS G_CDS: -1.53 Total: -4.04 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.07 Total: -6.69 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -7.87 -7.89 -15.76 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15102700_17656566.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.970 kcal (2) G-P(sol) polarization free energy of solvation -7.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.757 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds