Wall clock time and date at job start Mon Mar 8 2021 07:23:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45191 * 1 3 3 C 1.34710 * 117.00203 * 2 1 4 4 O 1.21467 * 120.00277 * 359.97438 * 3 2 1 5 5 C 1.47737 * 120.00158 * 180.02562 * 3 2 1 6 6 C 1.39602 * 120.15054 * 173.68168 * 5 3 2 7 7 C 1.50700 * 120.07685 * 0.02708 * 6 5 3 8 8 H 1.09000 * 112.90670 * 326.94446 * 7 6 5 9 9 C 1.53781 * 113.61782 * 98.19652 * 7 6 5 10 10 C 1.53783 * 87.08090 * 139.98034 * 9 7 6 11 11 H 1.08999 * 113.61702 * 219.93392 * 10 9 7 12 12 N 1.46501 * 113.61214 * 89.11624 * 10 9 7 13 13 C 1.39008 * 119.99819 * 156.52869 * 12 10 9 14 14 N 1.32398 * 119.70242 * 179.97438 * 13 12 10 15 15 C 1.31974 * 121.62112 * 179.97438 * 14 13 12 16 16 C 1.38020 * 120.85550 * 0.02562 * 15 14 13 17 17 C 1.50703 * 120.33784 * 179.97438 * 16 15 14 18 18 O 1.42897 * 109.46976 * 119.99729 * 17 16 15 19 19 Si 1.86296 * 109.46879 * 359.97438 * 17 16 15 20 20 C 1.38888 * 119.33043 * 0.24796 * 16 15 14 21 21 C 1.38305 * 118.50228 * 359.50822 * 20 16 15 22 22 C 1.53779 * 87.17511 * 334.52986 * 10 9 7 23 23 C 1.37965 * 119.84743 * 180.29406 * 6 5 3 24 24 C 1.38348 * 120.14882 * 359.44882 * 23 6 5 25 25 C 1.38389 * 120.29890 * 0.55559 * 24 23 6 26 26 C 1.37920 * 120.15612 * 359.72140 * 25 24 23 27 27 H 1.08998 * 109.47042 * 300.00483 * 1 2 3 28 28 H 1.09009 * 109.46999 * 60.00189 * 1 2 3 29 29 H 1.08997 * 109.47333 * 180.02562 * 1 2 3 30 30 H 1.08995 * 113.61331 * 25.43486 * 9 7 6 31 31 H 1.09003 * 113.68928 * 254.54034 * 9 7 6 32 32 H 0.96999 * 120.00063 * 336.53041 * 12 10 9 33 33 H 1.07999 * 119.57480 * 180.02562 * 15 14 13 34 34 H 1.09002 * 109.47322 * 239.99764 * 17 16 15 35 35 H 0.96703 * 114.00279 * 299.99920 * 18 17 16 36 36 H 1.48503 * 110.00127 * 179.97438 * 19 17 16 37 37 H 1.48496 * 110.00051 * 301.32175 * 19 17 16 38 38 H 1.08000 * 120.74691 * 179.74760 * 20 16 15 39 39 H 1.07998 * 120.44868 * 180.21415 * 21 20 16 40 40 H 1.08990 * 113.61893 * 140.02474 * 22 10 9 41 41 H 1.09009 * 113.60845 * 270.92859 * 22 10 9 42 42 H 1.07997 * 119.92633 * 179.70826 * 23 6 5 43 43 H 1.07998 * 119.84622 * 180.27340 * 24 23 6 44 44 H 1.08006 * 119.91756 * 179.74377 * 25 24 23 45 45 H 1.07998 * 120.07920 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0635 1.2003 0.0000 4 8 1.4020 2.2190 -0.0005 5 6 3.5389 1.2776 -0.0006 6 6 4.1762 2.5125 -0.1334 7 6 3.3609 3.7718 -0.2762 8 1 2.4263 3.6133 -0.8144 9 6 3.1896 4.5474 1.0406 10 6 3.3838 5.8320 0.2177 11 1 3.9908 6.5849 0.7203 12 7 2.1361 6.3760 -0.3241 13 6 2.0498 7.7244 -0.6507 14 7 0.9196 8.2098 -1.1404 15 6 0.7957 9.4836 -1.4627 16 6 1.8488 10.3607 -1.2995 17 6 1.6946 11.8128 -1.6720 18 8 1.9154 12.6265 -0.5182 19 14 -0.0266 12.1081 -2.3208 20 6 3.0538 9.8904 -0.7940 21 6 3.1521 8.5518 -0.4603 22 6 4.1715 4.9772 -0.7891 23 6 5.5544 2.5767 -0.1393 24 6 6.3044 1.4223 -0.0024 25 6 5.6790 0.1949 0.1296 26 6 4.3021 0.1155 0.1314 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 3.9869 4.3658 1.7612 31 1 2.1951 4.4547 1.4773 32 1 1.3702 5.7953 -0.4550 33 1 -0.1419 9.8443 -1.8593 34 1 2.4219 12.0696 -2.4422 35 1 1.3027 12.4519 0.2093 36 1 -0.1917 13.5367 -2.6911 37 1 -0.2793 11.2443 -3.5019 38 1 3.8940 10.5558 -0.6608 39 1 4.0732 8.1533 -0.0614 40 1 3.9689 5.2305 -1.8296 41 1 5.2369 4.9128 -0.5677 42 1 6.0488 3.5309 -0.2467 43 1 7.3829 1.4788 -0.0032 44 1 6.2706 -0.7029 0.2319 45 1 3.8153 -0.8429 0.2349 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15105876_13915762.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:23:48 Heat of formation + Delta-G solvation = -2.494119 kcal Electronic energy + Delta-G solvation = -28746.318911 eV Core-core repulsion = 24697.005662 eV Total energy + Delta-G solvation = -4049.313249 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.146 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.04565 -41.35732 -40.53219 -39.24010 -37.80738 -37.41142 -35.30148 -33.33536 -32.66656 -32.18418 -30.81070 -28.77689 -26.86373 -26.84293 -25.78634 -24.87035 -24.65882 -23.19785 -22.36473 -21.83640 -20.16595 -19.17167 -18.75569 -18.37608 -18.01360 -17.38808 -17.36809 -17.08917 -16.46746 -16.40302 -16.03511 -15.90664 -15.72325 -15.65170 -15.29965 -14.93213 -14.80136 -14.53653 -14.27893 -14.11858 -13.96699 -13.79171 -13.54797 -13.31520 -13.27686 -13.19507 -12.97109 -12.49314 -12.39565 -12.18595 -11.96767 -11.87698 -11.76333 -11.41388 -11.05293 -10.88594 -10.65723 -10.34129 -10.30291 -10.12924 -9.82819 -8.63552 -4.99332 -0.36346 0.23793 0.31030 0.49200 1.35428 1.52566 1.66927 1.68191 2.01647 2.08317 2.65337 2.91209 3.35965 3.50863 3.52666 3.61762 3.64103 3.66383 3.78652 3.83646 3.86066 3.97064 4.02225 4.11233 4.14009 4.16703 4.23832 4.27616 4.32514 4.41177 4.50700 4.55541 4.60119 4.62692 4.70585 4.79204 4.79921 4.90613 4.96033 4.99920 5.07287 5.15476 5.18869 5.27921 5.35784 5.37984 5.55965 5.63841 5.75224 6.08792 6.61228 6.63521 6.73987 7.23417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.356 6.356 3 C 0.507 3.493 4 O -0.498 6.498 5 C -0.129 4.129 6 C -0.005 4.005 7 C -0.081 4.081 8 H 0.126 0.874 9 C -0.126 4.126 10 C 0.132 3.868 11 H 0.099 0.901 12 N -0.703 5.703 13 C 0.411 3.589 14 N -0.540 5.540 15 C 0.156 3.844 16 C -0.238 4.238 17 C -0.051 4.051 18 O -0.543 6.543 19 Si 0.682 3.318 20 C -0.006 4.006 21 C -0.239 4.239 22 C -0.159 4.159 23 C -0.135 4.135 24 C -0.078 4.078 25 C -0.138 4.138 26 C -0.059 4.059 27 H 0.065 0.935 28 H 0.065 0.935 29 H 0.104 0.896 30 H 0.095 0.905 31 H 0.081 0.919 32 H 0.409 0.591 33 H 0.154 0.846 34 H 0.111 0.889 35 H 0.378 0.622 36 H -0.254 1.254 37 H -0.256 1.256 38 H 0.135 0.865 39 H 0.134 0.866 40 H 0.076 0.924 41 H 0.096 0.904 42 H 0.137 0.863 43 H 0.131 0.869 44 H 0.133 0.867 45 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.053 -3.660 2.414 4.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.273 6.273 3 C 0.353 3.647 4 O -0.387 6.387 5 C -0.130 4.130 6 C -0.005 4.005 7 C -0.099 4.099 8 H 0.144 0.856 9 C -0.164 4.164 10 C 0.025 3.975 11 H 0.117 0.883 12 N -0.334 5.334 13 C 0.176 3.824 14 N -0.256 5.256 15 C -0.002 4.002 16 C -0.243 4.243 17 C -0.163 4.163 18 O -0.348 6.348 19 Si 0.584 3.416 20 C -0.031 4.031 21 C -0.264 4.264 22 C -0.198 4.198 23 C -0.152 4.152 24 C -0.096 4.096 25 C -0.156 4.156 26 C -0.077 4.077 27 H 0.084 0.916 28 H 0.084 0.916 29 H 0.122 0.878 30 H 0.113 0.887 31 H 0.100 0.900 32 H 0.246 0.754 33 H 0.171 0.829 34 H 0.129 0.871 35 H 0.226 0.774 36 H -0.178 1.178 37 H -0.181 1.181 38 H 0.153 0.847 39 H 0.152 0.848 40 H 0.095 0.905 41 H 0.114 0.886 42 H 0.154 0.846 43 H 0.149 0.851 44 H 0.150 0.850 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.264 -3.502 1.321 3.951 hybrid contribution 0.865 -0.050 -0.104 0.872 sum 2.129 -3.552 1.217 4.317 Atomic orbital electron populations 1.23322 0.75480 1.04055 1.02811 1.86538 1.23919 1.32603 1.84196 1.21227 0.89100 0.81539 0.72849 1.90770 1.66899 1.35413 1.45626 1.18957 0.89063 0.94635 1.10337 1.19811 0.93754 0.93161 0.93821 1.22031 0.99476 0.89674 0.98710 0.85639 1.23258 1.03669 0.93407 0.96096 1.21796 0.85664 0.94982 0.95052 0.88343 1.44208 1.14909 1.05464 1.68811 1.18376 0.89268 0.85517 0.89267 1.67140 1.24743 1.15715 1.18050 1.22203 0.97181 0.87550 0.93220 1.20981 0.96229 0.97577 1.09498 1.24767 1.11902 0.87418 0.92252 1.86484 1.60925 1.61249 1.26160 0.94830 0.80493 0.80774 0.85528 1.21181 0.96627 0.94177 0.91144 1.21490 0.99871 0.94548 1.10448 1.23837 0.99719 0.95704 1.00519 1.21123 0.92644 0.99354 1.02118 1.21500 1.00584 0.92385 0.95111 1.21215 0.94343 0.98411 1.01627 1.21498 0.94051 0.97812 0.94351 0.91634 0.91646 0.87793 0.88683 0.90037 0.75436 0.82924 0.87128 0.77435 1.17847 1.18119 0.84687 0.84796 0.90495 0.88575 0.84558 0.85099 0.84956 0.84389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.55 9.84 -40.52 -0.40 -0.95 16 3 C 0.51 1.25 7.85 34.61 0.27 1.52 16 4 O -0.50 -1.87 13.06 -19.24 -0.25 -2.13 16 5 C -0.13 -0.18 5.87 -104.98 -0.62 -0.79 16 6 C -0.01 0.00 5.35 -104.21 -0.56 -0.56 16 7 C -0.08 -0.02 2.67 -90.82 -0.24 -0.26 16 8 H 0.13 0.28 5.79 -51.93 -0.30 -0.02 16 9 C -0.13 0.07 7.32 -25.92 -0.19 -0.12 16 10 C 0.13 -0.11 4.07 -67.12 -0.27 -0.39 16 11 H 0.10 -0.19 6.17 -51.93 -0.32 -0.51 16 12 N -0.70 -0.76 5.44 -53.14 -0.29 -1.04 16 13 C 0.41 1.04 7.65 -155.02 -1.19 -0.15 16 14 N -0.54 -1.96 10.39 -12.44 -0.13 -2.09 16 15 C 0.16 0.30 9.84 -17.57 -0.17 0.12 16 16 C -0.24 -0.27 5.40 -104.46 -0.56 -0.84 16 17 C -0.05 -0.02 2.83 36.01 0.10 0.09 16 18 O -0.54 -0.33 12.78 -35.23 -0.45 -0.78 16 19 Si 0.68 -0.31 29.82 -169.99 -5.07 -5.38 16 20 C -0.01 -0.01 9.77 -39.32 -0.38 -0.39 16 21 C -0.24 -0.29 9.28 -39.23 -0.36 -0.65 16 22 C -0.16 0.18 7.16 -25.78 -0.18 0.00 16 23 C -0.13 0.14 9.27 -39.64 -0.37 -0.23 16 24 C -0.08 0.12 10.04 -39.49 -0.40 -0.27 16 25 C -0.14 0.17 10.03 -39.64 -0.40 -0.23 16 26 C -0.06 0.00 9.62 -39.17 -0.38 -0.37 16 27 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.04 8.14 -51.92 -0.42 -0.47 16 29 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.09 -0.14 8.09 -51.93 -0.42 -0.56 16 31 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 32 H 0.41 0.66 8.83 -40.82 -0.36 0.30 16 33 H 0.15 -0.01 4.88 -52.49 -0.26 -0.27 16 34 H 0.11 0.07 7.96 -51.93 -0.41 -0.34 16 35 H 0.38 -1.15 8.70 45.56 0.40 -0.76 16 36 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 37 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 38 H 0.14 -0.01 8.06 -52.49 -0.42 -0.43 16 39 H 0.13 -0.09 6.06 -52.49 -0.32 -0.41 16 40 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 41 H 0.10 -0.27 5.68 -51.92 -0.29 -0.56 16 42 H 0.14 -0.40 5.70 -52.49 -0.30 -0.70 16 43 H 0.13 -0.48 8.06 -52.49 -0.42 -0.90 16 44 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 45 H 0.14 -0.16 7.63 -52.49 -0.40 -0.56 16 LS Contribution 370.48 15.07 5.58 5.58 Total: 0.00 -7.25 370.48 -11.40 -18.65 By element: Atomic # 1 Polarization: -3.82 SS G_CDS: -5.57 Total: -9.39 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -4.83 Total: -2.48 kcal Atomic # 7 Polarization: -2.72 SS G_CDS: -0.42 Total: -3.14 kcal Atomic # 8 Polarization: -2.75 SS G_CDS: -1.10 Total: -3.85 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.07 Total: -5.38 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.25 -11.40 -18.65 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15105876_13915762.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.156 kcal (2) G-P(sol) polarization free energy of solvation -7.248 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds