Wall clock time and date at job start Mon Mar 8 2021 07:24:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34710 * 117.00403 * 2 1 4 4 O 1.21466 * 120.00093 * 0.02562 * 3 2 1 5 5 C 1.47725 * 120.00213 * 179.97438 * 3 2 1 6 6 C 1.39609 * 120.15087 * 154.09763 * 5 3 2 7 7 C 1.50700 * 120.07487 * 359.97438 * 6 5 3 8 8 H 1.09003 * 112.84670 * 342.17313 * 7 6 5 9 9 C 1.53775 * 113.61410 * 113.36984 * 7 6 5 10 10 C 1.53783 * 87.07999 * 139.98031 * 9 7 6 11 11 H 1.08999 * 113.61777 * 219.93404 * 10 9 7 12 12 N 1.46503 * 113.61209 * 89.11537 * 10 9 7 13 13 C 1.39147 * 119.99742 * 154.99871 * 12 10 9 14 14 N 1.32340 * 119.72274 * 0.27112 * 13 12 10 15 15 C 1.32003 * 121.64769 * 180.26346 * 14 13 12 16 16 C 1.37983 * 120.89939 * 359.72651 * 15 14 13 17 17 C 1.50706 * 120.32552 * 179.97438 * 16 15 14 18 18 O 1.42893 * 109.47525 * 245.02299 * 17 16 15 19 19 Si 1.86310 * 109.46871 * 5.02586 * 17 16 15 20 20 C 1.38904 * 119.35183 * 359.97438 * 16 15 14 21 21 C 1.38447 * 118.47858 * 359.97438 * 20 16 15 22 22 F 1.35101 * 120.46423 * 179.97438 * 21 20 16 23 23 C 1.53778 * 87.08152 * 334.56867 * 10 9 7 24 24 C 1.37965 * 119.85033 * 179.70615 * 6 5 3 25 25 C 1.38346 * 120.14615 * 0.25635 * 24 6 5 26 26 C 1.38392 * 120.30735 * 0.02562 * 25 24 6 27 27 C 1.37916 * 120.14763 * 0.02562 * 26 25 24 28 28 H 1.08995 * 109.47250 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46777 * 299.99685 * 1 2 3 30 30 H 1.09000 * 109.47196 * 59.99398 * 1 2 3 31 31 H 1.08998 * 113.61753 * 25.43352 * 9 7 6 32 32 H 1.08997 * 113.69361 * 254.53868 * 9 7 6 33 33 H 0.96997 * 120.00314 * 335.00645 * 12 10 9 34 34 H 1.08000 * 119.54934 * 179.70348 * 15 14 13 35 35 H 1.09001 * 109.46724 * 125.01806 * 17 16 15 36 36 H 0.96705 * 113.99787 * 59.99761 * 18 17 16 37 37 H 1.48496 * 110.00220 * 58.67793 * 19 17 16 38 38 H 1.48496 * 109.99617 * 179.97438 * 19 17 16 39 39 H 1.08000 * 120.75879 * 180.02562 * 20 16 15 40 40 H 1.08999 * 113.61677 * 139.98019 * 23 10 9 41 41 H 1.08996 * 113.60980 * 270.88147 * 23 10 9 42 42 H 1.08000 * 119.92669 * 180.27688 * 24 6 5 43 43 H 1.08009 * 119.84602 * 180.02562 * 25 24 6 44 44 H 1.07998 * 119.92531 * 179.97438 * 26 25 24 45 45 H 1.07999 * 120.07614 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2002 0.0000 4 8 1.4022 2.2190 0.0005 5 6 3.5389 1.2775 0.0006 6 6 4.1825 2.3985 -0.5268 7 6 3.3739 3.5340 -1.0992 8 1 2.3474 3.2486 -1.3296 9 6 3.4843 4.8376 -0.2910 10 6 3.5269 5.5771 -1.6387 11 1 4.2343 6.4062 -1.6597 12 7 2.2036 5.9454 -2.1481 13 6 2.0690 7.0188 -3.0233 14 7 3.1407 7.6999 -3.3960 15 6 3.0563 8.7275 -4.2201 16 6 1.8386 9.1280 -4.7309 17 6 1.7571 10.3035 -5.6705 18 8 1.0153 11.3569 -5.0524 19 14 3.4763 10.9033 -6.0653 20 6 0.6887 8.4372 -4.3706 21 6 0.8078 7.3629 -3.5055 22 9 -0.2845 6.6630 -3.1281 23 6 4.0806 4.2770 -2.2453 24 6 5.5605 2.4669 -0.5175 25 6 6.3042 1.4254 0.0079 26 6 5.6729 0.3086 0.5269 27 6 4.2961 0.2268 0.5230 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 4.4082 4.9196 0.2814 32 1 2.5977 5.0617 0.3021 33 1 1.4213 5.4410 -1.8753 34 1 3.9524 9.2623 -4.4982 35 1 1.2583 9.9992 -6.5906 36 1 1.4022 11.6781 -4.2263 37 1 4.2680 9.8074 -6.6796 38 1 3.4096 12.0620 -6.9916 39 1 -0.2760 8.7309 -4.7571 40 1 3.6747 4.0473 -3.2304 41 1 5.1676 4.2058 -2.2071 42 1 6.0595 3.3354 -0.9211 43 1 7.3827 1.4842 0.0130 44 1 6.2596 -0.5010 0.9352 45 1 3.8046 -0.6454 0.9280 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15105876_17656566.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:24:02 Heat of formation + Delta-G solvation = -50.907311 kcal Electronic energy + Delta-G solvation = -31412.650522 eV Core-core repulsion = 26891.783944 eV Total energy + Delta-G solvation = -4520.866578 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.137 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -49.81486 -42.01585 -41.38877 -40.56778 -39.22872 -37.90408 -37.41676 -35.44885 -33.18811 -32.65781 -32.22468 -30.82633 -28.77470 -26.90019 -26.71955 -26.08862 -24.94501 -24.74989 -23.06292 -22.73668 -21.81797 -20.23105 -19.45724 -18.99553 -18.47092 -18.17035 -18.02109 -17.48799 -17.47700 -17.06997 -16.89582 -16.46623 -16.13349 -15.95000 -15.85380 -15.63220 -15.39117 -15.33149 -14.89299 -14.68458 -14.50407 -14.29947 -14.16660 -13.98000 -13.94886 -13.57934 -13.42935 -13.25375 -13.20239 -12.93712 -12.60359 -12.51676 -12.23384 -12.08797 -11.93983 -11.75134 -11.38373 -11.15566 -10.96213 -10.65990 -10.61092 -10.43130 -10.09745 -9.79926 -8.72492 -5.07988 -0.30207 -0.03222 0.15270 0.25407 1.23901 1.44427 1.59769 1.69926 1.94747 1.96784 2.57930 2.63942 3.08645 3.25819 3.42997 3.46360 3.55531 3.61303 3.66757 3.71453 3.83622 3.86173 3.92644 3.99840 4.01584 4.13545 4.18664 4.22951 4.30108 4.33880 4.41763 4.49605 4.55654 4.66408 4.68663 4.71990 4.74459 4.85219 4.91496 4.98158 5.01032 5.02769 5.15024 5.19979 5.27808 5.37892 5.45294 5.59081 5.77078 6.03063 6.22567 6.54241 6.71638 6.99111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.354 6.354 3 C 0.508 3.492 4 O -0.497 6.497 5 C -0.125 4.125 6 C -0.007 4.007 7 C -0.089 4.089 8 H 0.118 0.882 9 C -0.129 4.129 10 C 0.136 3.864 11 H 0.111 0.889 12 N -0.698 5.698 13 C 0.394 3.606 14 N -0.511 5.511 15 C 0.149 3.851 16 C -0.211 4.211 17 C -0.055 4.055 18 O -0.541 6.541 19 Si 0.685 3.315 20 C -0.037 4.037 21 C -0.020 4.020 22 F -0.133 7.133 23 C -0.150 4.150 24 C -0.129 4.129 25 C -0.080 4.080 26 C -0.135 4.135 27 C -0.062 4.062 28 H 0.104 0.896 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.097 0.903 32 H 0.079 0.921 33 H 0.414 0.586 34 H 0.163 0.837 35 H 0.115 0.885 36 H 0.380 0.620 37 H -0.254 1.254 38 H -0.252 1.252 39 H 0.149 0.851 40 H 0.073 0.927 41 H 0.096 0.904 42 H 0.136 0.864 43 H 0.131 0.869 44 H 0.133 0.867 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.919 -1.345 2.096 4.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.271 6.271 3 C 0.353 3.647 4 O -0.386 6.386 5 C -0.126 4.126 6 C -0.008 4.008 7 C -0.107 4.107 8 H 0.135 0.865 9 C -0.167 4.167 10 C 0.030 3.970 11 H 0.129 0.871 12 N -0.330 5.330 13 C 0.156 3.844 14 N -0.228 5.228 15 C -0.008 4.008 16 C -0.217 4.217 17 C -0.166 4.166 18 O -0.346 6.346 19 Si 0.586 3.414 20 C -0.063 4.063 21 C -0.047 4.047 22 F -0.112 7.112 23 C -0.188 4.188 24 C -0.147 4.147 25 C -0.098 4.098 26 C -0.153 4.153 27 C -0.080 4.080 28 H 0.123 0.877 29 H 0.084 0.916 30 H 0.083 0.917 31 H 0.115 0.885 32 H 0.097 0.903 33 H 0.252 0.748 34 H 0.180 0.820 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.179 1.179 38 H -0.176 1.176 39 H 0.166 0.834 40 H 0.091 0.909 41 H 0.114 0.886 42 H 0.153 0.847 43 H 0.149 0.851 44 H 0.151 0.849 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 4.840 -1.337 1.361 5.203 hybrid contribution -2.101 -0.692 -0.247 2.226 sum 2.739 -2.029 1.115 3.586 Atomic orbital electron populations 1.23334 0.75541 1.04105 1.02809 1.86572 1.23880 1.32558 1.84079 1.21258 0.89116 0.81567 0.72774 1.90787 1.66893 1.35689 1.45221 1.18961 0.88994 0.97222 1.07442 1.19764 0.93758 0.93032 0.94205 1.22016 1.00380 0.91708 0.96557 0.86464 1.23339 1.03682 0.93606 0.96122 1.21781 0.84602 0.97000 0.93653 0.87119 1.44291 1.09762 1.31065 1.47842 1.18406 0.87800 0.88683 0.89553 1.67280 1.29027 1.09433 1.17011 1.22307 0.96369 0.91360 0.90781 1.20921 0.93583 1.02005 1.05158 1.24859 1.08590 0.86525 0.96646 1.86514 1.53616 1.51938 1.42509 0.94890 0.76558 0.81756 0.88198 1.21278 1.00365 0.91235 0.93470 1.18008 0.82855 0.98163 1.05663 1.91500 1.51780 1.77646 1.90284 1.23676 1.00991 0.95833 0.98330 1.21035 0.92599 0.99822 1.01242 1.21480 1.00581 0.92947 0.94821 1.21195 0.94230 0.98936 1.00969 1.21429 0.94116 0.96719 0.95767 0.87737 0.91603 0.91673 0.88461 0.90261 0.74786 0.82036 0.86789 0.77298 1.17851 1.17640 0.83361 0.90872 0.88586 0.84664 0.85068 0.84948 0.84579 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.35 -0.68 10.12 -40.52 -0.41 -1.09 16 3 C 0.51 1.48 7.46 34.61 0.26 1.74 16 4 O -0.50 -2.19 13.64 -19.24 -0.26 -2.45 16 5 C -0.13 -0.22 5.86 -104.98 -0.61 -0.84 16 6 C -0.01 -0.01 5.31 -104.21 -0.55 -0.56 16 7 C -0.09 -0.06 3.00 -90.96 -0.27 -0.33 16 8 H 0.12 0.29 5.49 -51.93 -0.29 0.01 16 9 C -0.13 0.02 7.32 -25.92 -0.19 -0.17 16 10 C 0.14 0.01 4.35 -67.12 -0.29 -0.28 16 11 H 0.11 0.02 7.41 -51.93 -0.38 -0.36 16 12 N -0.70 -0.85 5.41 -53.06 -0.29 -1.14 16 13 C 0.39 0.88 7.49 -154.85 -1.16 -0.28 16 14 N -0.51 -0.94 9.13 -12.37 -0.11 -1.05 16 15 C 0.15 0.01 9.84 -17.57 -0.17 -0.16 16 16 C -0.21 -0.01 5.36 -104.47 -0.56 -0.57 16 17 C -0.05 0.04 2.82 36.01 0.10 0.15 16 18 O -0.54 0.13 12.84 -35.23 -0.45 -0.32 16 19 Si 0.68 -1.22 29.83 -169.99 -5.07 -6.29 16 20 C -0.04 -0.04 9.82 -39.26 -0.39 -0.43 16 21 C -0.02 -0.05 7.35 -39.09 -0.29 -0.34 16 22 F -0.13 -0.44 16.65 2.25 0.04 -0.40 16 23 C -0.15 0.04 7.24 -25.92 -0.19 -0.15 16 24 C -0.13 0.09 8.93 -39.64 -0.35 -0.26 16 25 C -0.08 0.10 10.04 -39.48 -0.40 -0.29 16 26 C -0.14 0.13 10.03 -39.64 -0.40 -0.27 16 27 C -0.06 -0.02 9.61 -39.17 -0.38 -0.39 16 28 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 30 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.10 -0.12 7.93 -51.93 -0.41 -0.53 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.41 0.48 8.17 -40.82 -0.33 0.15 16 34 H 0.16 -0.41 4.91 -52.49 -0.26 -0.66 16 35 H 0.11 -0.05 7.96 -51.93 -0.41 -0.47 16 36 H 0.38 -1.54 8.70 45.56 0.40 -1.14 16 37 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 38 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 39 H 0.15 0.05 8.06 -52.49 -0.42 -0.37 16 40 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 41 H 0.10 -0.16 6.02 -51.93 -0.31 -0.47 16 42 H 0.14 -0.34 6.29 -52.49 -0.33 -0.67 16 43 H 0.13 -0.45 8.06 -52.48 -0.42 -0.87 16 44 H 0.13 -0.39 8.06 -52.49 -0.42 -0.82 16 45 H 0.14 -0.13 7.86 -52.49 -0.41 -0.54 16 LS Contribution 379.83 15.07 5.72 5.72 Total: 0.00 -7.29 379.83 -10.93 -18.22 By element: Atomic # 1 Polarization: -3.47 SS G_CDS: -5.32 Total: -8.80 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -4.77 Total: -2.40 kcal Atomic # 7 Polarization: -1.79 SS G_CDS: -0.40 Total: -2.19 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -1.12 Total: -3.87 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.07 Total: -6.29 kcal Total LS contribution 5.72 Total: 5.72 kcal Total: -7.29 -10.93 -18.22 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15105876_17656566.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.685 kcal (2) G-P(sol) polarization free energy of solvation -7.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.975 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.222 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.907 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds