Wall clock time and date at job start Mon Mar 8 2021 08:28:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86294 * 109.47350 * 2 1 4 4 C 1.50696 * 109.47409 * 120.00114 * 2 1 3 5 5 C 1.37984 * 120.32962 * 245.00273 * 4 2 1 6 6 N 1.32009 * 120.90289 * 179.97438 * 5 4 2 7 7 C 1.32339 * 121.64504 * 359.97438 * 6 5 4 8 8 N 1.39152 * 119.71732 * 179.97438 * 7 6 5 9 9 C 1.46497 * 119.99663 * 0.02562 * 8 7 6 10 10 C 1.52999 * 109.46876 * 174.99474 * 9 8 7 11 11 C 1.53006 * 112.84791 * 293.63684 * 10 9 8 12 12 O 1.42896 * 109.47183 * 295.62380 * 11 10 9 13 13 C 1.53782 * 113.61755 * 64.83088 * 10 9 8 14 14 C 1.53786 * 87.08081 * 139.98183 * 13 10 9 15 15 H 1.08996 * 113.61153 * 89.11906 * 14 13 10 16 16 O 1.42898 * 113.61427 * 219.93460 * 14 13 10 17 17 C 1.42897 * 113.99979 * 209.99922 * 16 14 13 18 18 C 1.50699 * 109.47204 * 180.02562 * 17 16 14 19 19 C 1.38240 * 120.00116 * 269.73083 * 18 17 16 20 20 C 1.38230 * 119.99776 * 179.81298 * 19 18 17 21 21 C 1.38232 * 120.00362 * 0.38605 * 20 19 18 22 22 C 1.38234 * 119.99980 * 359.86919 * 21 20 19 23 23 C 1.38232 * 120.00117 * 90.00164 * 18 17 16 24 24 C 1.53776 * 87.08263 * 334.57104 * 14 13 10 25 25 C 1.39343 * 120.56765 * 0.25378 * 7 6 5 26 26 F 1.35098 * 120.47429 * 179.72238 * 25 7 6 27 27 C 1.38446 * 119.05077 * 359.49896 * 25 7 6 28 28 H 0.96702 * 113.99673 * 300.00559 * 1 2 3 29 29 H 1.09003 * 109.47281 * 240.00036 * 2 1 3 30 30 H 1.48502 * 110.00045 * 178.68171 * 3 2 1 31 31 H 1.48503 * 110.00237 * 300.00132 * 3 2 1 32 32 H 1.08001 * 119.54596 * 359.94650 * 5 4 2 33 33 H 0.97001 * 119.99927 * 179.97438 * 8 7 6 34 34 H 1.08998 * 109.46912 * 294.98612 * 9 8 7 35 35 H 1.08993 * 109.47640 * 54.99141 * 9 8 7 36 36 H 1.09003 * 109.47010 * 55.62547 * 11 10 9 37 37 H 1.09002 * 109.47154 * 175.62254 * 11 10 9 38 38 H 0.96696 * 113.99965 * 180.02562 * 12 11 10 39 39 H 1.08990 * 113.61825 * 254.53286 * 13 10 9 40 40 H 1.09002 * 113.61184 * 25.43844 * 13 10 9 41 41 H 1.09000 * 109.47387 * 300.00663 * 17 16 14 42 42 H 1.08997 * 109.47215 * 60.00292 * 17 16 14 43 43 H 1.07996 * 119.99568 * 359.97438 * 19 18 17 44 44 H 1.08006 * 119.99688 * 180.23542 * 20 19 18 45 45 H 1.07998 * 120.00254 * 179.83388 * 21 20 19 46 46 H 1.07997 * 119.99910 * 179.97438 * 22 21 20 47 47 H 1.08006 * 119.99918 * 359.97438 * 23 18 17 48 48 H 1.09007 * 113.61554 * 270.88408 * 24 14 13 49 49 H 1.08993 * 113.61966 * 139.97702 * 24 14 13 50 50 H 1.08007 * 120.75547 * 180.24275 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6381 -0.0202 2.1937 6 7 3.0830 -0.6310 3.2761 7 6 2.8713 -1.9211 3.4819 8 7 3.3590 -2.5245 4.6370 9 6 4.1027 -1.7320 5.6193 10 6 4.4145 -2.5973 6.8419 11 6 3.1600 -3.0021 7.6188 12 8 2.5391 -1.8355 8.1623 13 6 5.3582 -3.7734 6.5399 14 6 6.0345 -3.4745 7.8883 15 1 5.5844 -4.0024 8.7290 16 8 7.4579 -3.5966 7.8543 17 6 8.0371 -3.9938 9.0988 18 6 9.5335 -4.0898 8.9485 19 6 10.1146 -5.2848 8.5672 20 6 11.4869 -5.3718 8.4256 21 6 12.2788 -4.2661 8.6730 22 6 11.6981 -3.0726 9.0593 23 6 10.3255 -2.9846 9.1973 24 6 5.5343 -2.0291 7.7296 25 6 2.1692 -2.6816 2.5490 26 9 1.9590 -3.9996 2.7583 27 6 1.6861 -2.0663 1.4067 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.8303 1.0342 2.0601 33 1 3.2059 -3.4697 4.7921 34 1 5.0345 -1.3830 5.1741 35 1 3.5024 -0.8749 5.9243 36 1 2.4636 -3.5051 6.9477 37 1 3.4362 -3.6775 8.4285 38 1 1.7360 -2.0173 8.6691 39 1 4.8553 -4.7398 6.5084 40 1 6.0057 -3.6037 5.6796 41 1 7.7957 -3.2560 9.8639 42 1 7.6380 -4.9648 9.3918 43 1 9.4962 -6.1496 8.3775 44 1 11.9406 -6.3044 8.1241 45 1 13.3512 -4.3348 8.5650 46 1 12.3169 -2.2089 9.2530 47 1 9.8718 -2.0520 9.4990 48 1 6.2299 -1.3825 7.1945 49 1 5.1735 -1.5874 8.6584 50 1 1.1350 -2.6286 0.6674 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15111638_17656566.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:28:25 Heat of formation + Delta-G solvation = -68.833160 kcal Electronic energy + Delta-G solvation = -33290.389277 eV Core-core repulsion = 28585.896279 eV Total energy + Delta-G solvation = -4704.492998 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.168 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -49.83477 -41.60303 -41.12411 -40.17198 -38.34626 -37.94861 -36.87479 -36.05094 -33.23159 -32.79564 -31.81150 -31.75411 -29.27231 -27.51255 -27.08680 -26.74654 -26.07738 -24.64794 -23.49877 -23.00861 -22.67023 -22.27573 -19.87083 -19.18934 -18.62690 -18.44132 -18.20213 -18.00251 -17.72231 -17.44090 -16.97650 -16.69544 -16.59630 -16.23139 -16.13638 -15.96825 -15.76130 -15.69585 -15.35134 -15.27888 -15.01472 -14.76467 -14.30903 -14.28615 -14.07653 -14.01125 -13.88294 -13.84944 -13.49371 -13.43741 -13.36461 -12.93353 -12.71555 -12.58080 -12.27713 -12.06717 -11.97161 -11.77931 -11.73480 -11.52022 -11.23755 -10.97635 -10.65176 -10.62298 -10.46387 -10.42276 -9.82553 -9.76218 -8.70589 -5.06203 -0.02061 0.17553 0.33726 0.49787 1.25315 1.61448 1.96037 1.97585 2.54493 2.61307 2.87925 3.06628 3.10406 3.30436 3.36500 3.44803 3.47893 3.59573 3.62328 3.78298 3.85996 3.87758 3.90416 3.97877 4.04431 4.05993 4.09919 4.22561 4.28728 4.33452 4.36801 4.39300 4.42863 4.52280 4.60152 4.61038 4.71272 4.72834 4.74116 4.74596 4.90971 4.94580 5.01478 5.04489 5.11953 5.12787 5.14643 5.40459 5.53544 5.61104 5.64862 5.97371 6.06344 6.19860 6.21646 6.53865 6.54794 7.00632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.054 4.054 3 Si 0.684 3.316 4 C -0.212 4.212 5 C 0.150 3.850 6 N -0.511 5.511 7 C 0.393 3.607 8 N -0.714 5.714 9 C 0.155 3.845 10 C -0.097 4.097 11 C 0.099 3.901 12 O -0.565 6.565 13 C -0.125 4.125 14 C 0.063 3.937 15 H 0.088 0.912 16 O -0.364 6.364 17 C 0.102 3.898 18 C -0.094 4.094 19 C -0.099 4.099 20 C -0.123 4.123 21 C -0.113 4.113 22 C -0.123 4.123 23 C -0.098 4.098 24 C -0.131 4.131 25 C -0.023 4.023 26 F -0.135 7.135 27 C -0.037 4.037 28 H 0.379 0.621 29 H 0.115 0.885 30 H -0.254 1.254 31 H -0.251 1.251 32 H 0.163 0.837 33 H 0.410 0.590 34 H 0.068 0.932 35 H 0.082 0.918 36 H 0.049 0.951 37 H 0.050 0.950 38 H 0.383 0.617 39 H 0.075 0.925 40 H 0.101 0.899 41 H 0.059 0.941 42 H 0.058 0.942 43 H 0.122 0.878 44 H 0.124 0.876 45 H 0.123 0.877 46 H 0.124 0.876 47 H 0.123 0.877 48 H 0.096 0.904 49 H 0.080 0.920 50 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.939 -0.175 4.135 4.244 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.166 4.166 3 Si 0.585 3.415 4 C -0.218 4.218 5 C -0.007 4.007 6 N -0.228 5.228 7 C 0.154 3.846 8 N -0.347 5.347 9 C 0.032 3.968 10 C -0.097 4.097 11 C 0.021 3.979 12 O -0.371 6.371 13 C -0.162 4.162 14 C 0.005 3.995 15 H 0.106 0.894 16 O -0.283 6.283 17 C 0.026 3.974 18 C -0.094 4.094 19 C -0.117 4.117 20 C -0.141 4.141 21 C -0.131 4.131 22 C -0.141 4.141 23 C -0.117 4.117 24 C -0.169 4.169 25 C -0.049 4.049 26 F -0.114 7.114 27 C -0.063 4.063 28 H 0.227 0.773 29 H 0.132 0.868 30 H -0.178 1.178 31 H -0.176 1.176 32 H 0.179 0.821 33 H 0.247 0.753 34 H 0.086 0.914 35 H 0.100 0.900 36 H 0.067 0.933 37 H 0.068 0.932 38 H 0.230 0.770 39 H 0.094 0.906 40 H 0.119 0.881 41 H 0.077 0.923 42 H 0.076 0.924 43 H 0.140 0.860 44 H 0.142 0.858 45 H 0.141 0.859 46 H 0.142 0.858 47 H 0.141 0.859 48 H 0.114 0.886 49 H 0.099 0.901 50 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 0.823 0.973 3.485 3.710 hybrid contribution -1.047 -2.172 -0.200 2.419 sum -0.224 -1.199 3.284 3.503 Atomic orbital electron populations 1.86510 1.17115 1.81678 1.49296 1.24846 0.85190 1.09900 0.96639 0.94869 0.81234 0.77663 0.87726 1.20915 1.05982 0.94679 1.00209 1.22312 0.91612 0.99183 0.87581 1.67309 1.24889 1.07306 1.23287 1.18411 0.90374 0.88923 0.86880 1.44521 1.59337 1.12013 1.18825 1.21177 0.96364 0.93547 0.85737 1.21852 0.93827 0.97946 0.96124 1.21859 0.92860 0.87286 0.95875 1.86467 1.44864 1.32499 1.73224 1.23315 0.96683 0.97624 0.98596 1.23695 0.81169 0.96655 0.98015 0.89407 1.88052 1.19224 1.88811 1.32244 1.21371 0.89895 0.99376 0.86768 1.19583 0.94000 0.94240 1.01538 1.21071 0.95072 0.97350 0.98249 1.21188 0.93734 0.98910 1.00304 1.21255 1.00117 0.93125 0.98648 1.21195 0.94880 0.98070 0.99958 1.21082 0.93762 0.97833 0.98983 1.23427 0.95908 0.97227 1.00369 1.17998 1.08939 0.79429 0.98563 1.91482 1.93761 1.31166 1.94965 1.21266 0.95533 0.94435 0.95108 0.77310 0.86782 1.17842 1.17613 0.82077 0.75324 0.91387 0.90025 0.93311 0.93225 0.77001 0.90606 0.88089 0.92271 0.92383 0.85987 0.85798 0.85860 0.85765 0.85904 0.88568 0.90125 0.83402 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.09 12.84 -35.23 -0.45 -0.36 16 2 C -0.05 0.04 2.82 36.00 0.10 0.14 16 3 Si 0.68 -1.04 29.83 -169.99 -5.07 -6.11 16 4 C -0.21 -0.04 5.36 -104.47 -0.56 -0.60 16 5 C 0.15 0.07 9.84 -17.57 -0.17 -0.10 16 6 N -0.51 -1.19 9.56 -12.36 -0.12 -1.31 16 7 C 0.39 0.84 7.49 -154.85 -1.16 -0.32 16 8 N -0.71 -0.38 5.37 -60.34 -0.32 -0.71 16 9 C 0.16 0.05 4.96 -4.04 -0.02 0.03 16 10 C -0.10 0.11 0.63 -153.69 -0.10 0.02 16 11 C 0.10 -0.19 6.20 37.16 0.23 0.04 16 12 O -0.56 0.45 13.18 -35.23 -0.46 -0.02 16 13 C -0.12 0.16 6.73 -25.92 -0.17 -0.02 16 14 C 0.06 -0.05 3.96 -25.92 -0.10 -0.15 16 15 H 0.09 -0.18 7.33 -51.93 -0.38 -0.56 16 16 O -0.36 -0.57 10.34 -35.23 -0.36 -0.93 16 17 C 0.10 0.02 5.90 36.01 0.21 0.24 16 18 C -0.09 -0.15 5.51 -104.62 -0.58 -0.72 16 19 C -0.10 -0.13 9.70 -39.58 -0.38 -0.52 16 20 C -0.12 -0.13 10.05 -39.59 -0.40 -0.52 16 21 C -0.11 -0.11 10.05 -39.58 -0.40 -0.50 16 22 C -0.12 -0.13 10.05 -39.58 -0.40 -0.52 16 23 C -0.10 -0.14 9.70 -39.58 -0.38 -0.52 16 24 C -0.13 0.07 7.00 -25.92 -0.18 -0.11 16 25 C -0.02 -0.05 7.35 -39.09 -0.29 -0.33 16 26 F -0.13 -0.33 16.65 2.25 0.04 -0.30 16 27 C -0.04 -0.04 9.82 -39.26 -0.39 -0.43 16 28 H 0.38 -1.50 8.70 45.56 0.40 -1.11 16 29 H 0.11 -0.04 7.96 -51.93 -0.41 -0.46 16 30 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 31 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 32 H 0.16 -0.32 4.90 -52.49 -0.26 -0.58 16 33 H 0.41 -0.23 7.35 -40.82 -0.30 -0.53 16 34 H 0.07 0.08 8.05 -51.93 -0.42 -0.34 16 35 H 0.08 0.16 7.88 -51.93 -0.41 -0.25 16 36 H 0.05 -0.11 7.59 -51.93 -0.39 -0.50 16 37 H 0.05 -0.15 7.31 -51.93 -0.38 -0.53 16 38 H 0.38 -1.73 9.12 45.56 0.42 -1.31 16 39 H 0.08 -0.18 8.10 -51.93 -0.42 -0.60 16 40 H 0.10 0.00 8.10 -51.93 -0.42 -0.42 16 41 H 0.06 -0.04 8.08 -51.93 -0.42 -0.46 16 42 H 0.06 -0.06 8.08 -51.93 -0.42 -0.48 16 43 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 44 H 0.12 -0.10 8.06 -52.48 -0.42 -0.52 16 45 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 46 H 0.12 -0.09 8.06 -52.49 -0.42 -0.52 16 47 H 0.12 0.00 8.06 -52.48 -0.42 -0.42 16 48 H 0.10 0.02 8.03 -51.93 -0.42 -0.39 16 49 H 0.08 -0.02 8.03 -51.93 -0.42 -0.44 16 50 H 0.15 0.03 8.06 -52.48 -0.42 -0.39 16 LS Contribution 418.07 15.07 6.30 6.30 Total: 0.00 -7.98 418.07 -11.98 -19.96 By element: Atomic # 1 Polarization: -5.23 SS G_CDS: -6.39 Total: -11.62 kcal Atomic # 6 Polarization: 0.22 SS G_CDS: -5.13 Total: -4.91 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: -0.44 Total: -2.01 kcal Atomic # 8 Polarization: -0.03 SS G_CDS: -1.28 Total: -1.31 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.07 Total: -6.11 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -7.98 -11.98 -19.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15111638_17656566.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.876 kcal (2) G-P(sol) polarization free energy of solvation -7.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.852 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.958 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.833 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds