Wall clock time and date at job start Mon Mar 8 2021 06:54:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43202 * 179.97438 * 2 1 4 4 C 1.39605 * 120.14723 * 193.99987 * 3 2 1 5 5 C 1.37965 * 119.84790 * 179.97438 * 4 3 2 6 6 C 1.38348 * 120.14917 * 359.74345 * 5 4 3 7 7 C 1.38382 * 120.30434 * 0.51293 * 6 5 4 8 8 C 1.50701 * 119.92644 * 179.76261 * 7 6 5 9 9 H 1.09003 * 112.84710 * 190.91998 * 8 7 6 10 10 C 1.54050 * 113.61645 * 322.23278 * 8 7 6 11 11 C 1.53785 * 86.98465 * 139.97850 * 10 8 7 12 12 H 1.08995 * 113.61297 * 219.98380 * 11 10 8 13 13 N 1.46500 * 113.61595 * 89.15881 * 11 10 8 14 14 C 1.38398 * 120.00091 * 105.86584 * 13 11 10 15 15 N 1.32501 * 119.21725 * 0.25057 * 14 13 11 16 16 C 1.32272 * 120.74110 * 180.26714 * 15 14 13 17 17 C 1.38605 * 119.19705 * 359.48581 * 16 15 14 18 18 C 1.50697 * 120.72340 * 180.23291 * 17 16 15 19 19 O 1.42902 * 109.47002 * 64.99951 * 18 17 16 20 20 Si 1.86296 * 109.47363 * 185.00112 * 18 17 16 21 21 C 1.38607 * 118.56029 * 0.25336 * 17 16 15 22 22 N 1.32280 * 119.19188 * 0.02562 * 21 17 16 23 23 C 1.53779 * 113.61032 * 59.72506 * 8 7 6 24 24 C 1.37936 * 120.14886 * 359.48987 * 7 6 5 25 25 H 1.08001 * 120.08215 * 359.95275 * 4 3 2 26 26 H 1.07999 * 119.93242 * 179.97438 * 5 4 3 27 27 H 1.07997 * 119.84735 * 180.27666 * 6 5 4 28 28 H 1.08998 * 113.61508 * 25.47161 * 10 8 7 29 29 H 1.09000 * 113.69218 * 254.48757 * 10 8 7 30 30 H 0.97005 * 119.99715 * 285.85866 * 13 11 10 31 31 H 1.08002 * 120.40454 * 179.76837 * 16 15 14 32 32 H 1.09002 * 109.47287 * 305.00395 * 18 17 16 33 33 H 0.96695 * 113.99973 * 60.00814 * 19 18 17 34 34 H 1.48499 * 110.00181 * 58.68202 * 20 18 17 35 35 H 1.48500 * 110.00176 * 180.02562 * 20 18 17 36 36 H 1.08001 * 120.40449 * 180.02562 * 21 17 16 37 37 H 1.09003 * 113.61205 * 105.46963 * 23 8 7 38 38 H 1.08996 * 113.61993 * 334.57263 * 23 8 7 39 39 H 1.07999 * 120.07466 * 180.27564 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2687 1.1723 0.2921 5 6 4.6483 1.1658 0.2908 6 6 5.3374 0.0004 0.0063 7 6 4.6493 -1.1633 -0.2893 8 6 5.4086 -2.4266 -0.6032 9 1 4.7707 -3.2161 -1.0007 10 6 6.6871 -2.1891 -1.4291 11 6 7.3589 -3.2521 -0.5438 12 1 8.3843 -3.0061 -0.2681 13 7 7.2197 -4.6170 -1.0575 14 6 8.3036 -5.2515 -1.6388 15 7 9.4613 -4.6119 -1.7182 16 6 10.5153 -5.1877 -2.2724 17 6 10.4003 -6.4788 -2.7633 18 6 11.5804 -7.1695 -3.3968 19 8 12.5989 -7.3694 -2.4145 20 14 11.0428 -8.8179 -4.0783 21 6 9.1763 -7.1207 -2.6594 22 7 8.1603 -6.4857 -2.0987 23 6 6.3271 -2.8930 0.5385 24 6 3.2700 -1.1709 -0.2916 25 1 2.7320 2.0819 0.5181 26 1 5.1917 2.0715 0.5162 27 1 6.4174 -0.0002 0.0110 28 1 7.1066 -1.1905 -1.3069 29 1 6.5951 -2.4858 -2.4738 30 1 6.3678 -5.0760 -0.9901 31 1 11.4553 -4.6599 -2.3376 32 1 11.9718 -6.5522 -4.2054 33 1 12.3203 -7.9115 -1.6638 34 1 9.9616 -8.6260 -5.0779 35 1 12.1978 -9.5094 -4.7052 36 1 9.0535 -8.1271 -3.0317 37 1 5.9446 -3.7575 1.0812 38 1 6.6484 -2.0866 1.1977 39 1 2.7341 -2.0808 -0.5181 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15356834_12175864.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:54:25 Heat of formation + Delta-G solvation = 116.044582 kcal Electronic energy + Delta-G solvation = -23262.812952 eV Core-core repulsion = 19752.463968 eV Total energy + Delta-G solvation = -3510.348984 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.122 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.19020 -41.37442 -39.67077 -38.06782 -37.34589 -35.57887 -34.70412 -32.76764 -32.40029 -31.48853 -27.06387 -26.88767 -26.19203 -25.66386 -24.86971 -23.31766 -22.92507 -20.90124 -19.65055 -19.08572 -18.66465 -17.88237 -17.49585 -16.91459 -16.64049 -16.48825 -16.23211 -15.91020 -15.79216 -15.44161 -15.14686 -15.04143 -14.59893 -14.58759 -14.18794 -14.14141 -14.06371 -13.71561 -13.66138 -13.22676 -13.19538 -12.93771 -12.67998 -12.24647 -12.07078 -11.96116 -11.86163 -11.77893 -11.41811 -11.22236 -10.62424 -10.07734 -10.03015 -9.85404 -9.15423 -5.13034 -0.31009 0.03195 0.13118 0.17026 1.20227 1.54520 1.69463 1.71223 1.90533 1.90851 2.75686 2.79093 2.82966 3.10793 3.30978 3.39067 3.47411 3.54020 3.58554 3.67939 3.69642 3.73406 3.79726 3.92743 3.99051 4.10390 4.16964 4.32103 4.45046 4.51629 4.55993 4.60101 4.67745 4.75546 4.78538 4.85174 4.89686 4.95386 5.17015 5.20671 5.25793 5.41124 5.67678 5.74506 6.01386 6.34168 6.49021 6.50346 7.26032 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.412 5.412 2 C 0.250 3.750 3 C -0.025 4.025 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.071 4.071 8 C -0.076 4.076 9 H 0.100 0.900 10 C -0.145 4.145 11 C 0.136 3.864 12 H 0.110 0.890 13 N -0.678 5.678 14 C 0.570 3.430 15 N -0.563 5.563 16 C 0.222 3.778 17 C -0.294 4.294 18 C -0.046 4.046 19 O -0.540 6.540 20 Si 0.679 3.321 21 C 0.201 3.799 22 N -0.566 5.566 23 C -0.136 4.136 24 C -0.067 4.067 25 H 0.133 0.867 26 H 0.135 0.865 27 H 0.132 0.868 28 H 0.097 0.903 29 H 0.074 0.926 30 H 0.415 0.585 31 H 0.170 0.830 32 H 0.116 0.884 33 H 0.379 0.621 34 H -0.255 1.255 35 H -0.251 1.251 36 H 0.167 0.833 37 H 0.079 0.921 38 H 0.102 0.898 39 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.528 -0.849 1.772 4.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.087 5.087 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.095 4.095 5 C -0.133 4.133 6 C -0.105 4.105 7 C -0.071 4.071 8 C -0.094 4.094 9 H 0.118 0.882 10 C -0.183 4.183 11 C 0.030 3.970 12 H 0.128 0.872 13 N -0.314 5.314 14 C 0.213 3.787 15 N -0.285 5.285 16 C 0.054 3.946 17 C -0.302 4.302 18 C -0.158 4.158 19 O -0.346 6.346 20 Si 0.581 3.419 21 C 0.034 3.966 22 N -0.287 5.287 23 C -0.174 4.174 24 C -0.088 4.088 25 H 0.151 0.849 26 H 0.153 0.847 27 H 0.150 0.850 28 H 0.116 0.884 29 H 0.093 0.907 30 H 0.253 0.747 31 H 0.187 0.813 32 H 0.133 0.867 33 H 0.226 0.774 34 H -0.180 1.180 35 H -0.175 1.175 36 H 0.183 0.817 37 H 0.097 0.903 38 H 0.120 0.880 39 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.223 -0.336 1.154 2.527 hybrid contribution 0.719 0.052 -0.536 0.898 sum 2.941 -0.284 0.618 3.019 Atomic orbital electron populations 1.81311 1.12065 1.07009 1.08317 1.25747 0.92706 0.94095 0.94013 1.15985 0.84299 0.95724 1.06821 1.21236 0.94540 0.96746 0.96929 1.21131 0.93568 0.98753 0.99884 1.21302 1.00651 0.91965 0.96633 1.19602 0.92727 0.95270 0.99545 1.21692 0.95171 0.94808 0.97721 0.88158 1.23667 0.95006 1.00009 0.99660 1.21833 1.00811 0.80254 0.94135 0.87169 1.43809 1.10182 1.14843 1.62539 1.19338 0.86613 0.85378 0.87324 1.68000 0.99554 1.38206 1.22769 1.22866 0.95777 0.90290 0.85650 1.21719 0.98345 0.99294 1.10843 1.24691 0.88433 1.08156 0.94529 1.86513 1.37453 1.75212 1.35373 0.95006 0.81151 0.79762 0.86011 1.22747 0.86898 0.98148 0.88830 1.67875 1.34031 1.09241 1.17554 1.23469 0.95572 1.02211 0.96194 1.21091 0.93687 0.96794 0.97213 0.84914 0.84677 0.84987 0.88422 0.90695 0.74717 0.81269 0.86696 0.77355 1.17994 1.17505 0.81662 0.90252 0.87972 0.85034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.08 18.54 41.84 0.78 -1.31 16 2 C 0.25 0.54 15.33 -22.47 -0.34 0.19 16 3 C -0.02 0.01 5.73 -106.93 -0.61 -0.60 16 4 C -0.07 0.14 9.76 -39.17 -0.38 -0.25 16 5 C -0.12 0.34 10.03 -39.64 -0.40 -0.06 16 6 C -0.09 0.27 8.59 -39.49 -0.34 -0.06 16 7 C -0.07 0.18 5.28 -104.68 -0.55 -0.37 16 8 C -0.08 0.26 3.87 -90.82 -0.35 -0.09 16 9 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 10 C -0.14 0.41 7.27 -25.77 -0.19 0.23 16 11 C 0.14 -0.32 4.31 -67.11 -0.29 -0.61 16 12 H 0.11 -0.15 7.40 -51.93 -0.38 -0.53 16 13 N -0.68 0.63 5.41 -55.00 -0.30 0.33 16 14 C 0.57 0.79 8.43 -322.82 -2.72 -1.93 16 15 N -0.56 -0.80 9.15 -13.93 -0.13 -0.93 16 16 C 0.22 0.01 10.99 -17.23 -0.19 -0.17 16 17 C -0.29 0.24 5.36 -104.35 -0.56 -0.32 16 18 C -0.05 0.08 2.83 36.00 0.10 0.18 16 19 O -0.54 0.69 12.85 -35.23 -0.45 0.23 16 20 Si 0.68 -1.56 29.88 -169.99 -5.08 -6.64 16 21 C 0.20 -0.07 9.92 -17.22 -0.17 -0.25 16 22 N -0.57 -0.87 10.46 -13.93 -0.15 -1.02 16 23 C -0.14 0.51 7.29 -25.92 -0.19 0.32 16 24 C -0.07 0.11 9.41 -39.17 -0.37 -0.26 16 25 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 26 H 0.14 -0.65 8.06 -52.49 -0.42 -1.07 16 27 H 0.13 -0.64 6.66 -52.49 -0.35 -0.99 16 28 H 0.10 -0.36 6.32 -51.93 -0.33 -0.69 16 29 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 30 H 0.41 -0.83 8.82 -40.82 -0.36 -1.19 16 31 H 0.17 -0.28 8.06 -52.49 -0.42 -0.71 16 32 H 0.12 -0.18 7.96 -51.93 -0.41 -0.60 16 33 H 0.38 -1.85 8.70 45.56 0.40 -1.45 16 34 H -0.26 -0.04 7.11 56.52 0.40 0.36 16 35 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 36 H 0.17 -0.48 5.07 -52.49 -0.27 -0.75 16 37 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 38 H 0.10 -0.44 7.71 -51.93 -0.40 -0.84 16 39 H 0.13 -0.34 8.05 -52.49 -0.42 -0.76 16 LS Contribution 340.14 15.07 5.13 5.13 Total: 0.00 -8.15 340.14 -12.01 -20.16 By element: Atomic # 1 Polarization: -7.66 SS G_CDS: -4.26 Total: -11.92 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: -7.55 Total: -4.04 kcal Atomic # 7 Polarization: -3.13 SS G_CDS: 0.20 Total: -2.92 kcal Atomic # 8 Polarization: 0.69 SS G_CDS: -0.45 Total: 0.23 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.08 Total: -6.64 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -8.15 -12.01 -20.16 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15356834_12175864.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.205 kcal (2) G-P(sol) polarization free energy of solvation -8.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 128.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.160 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds