Wall clock time and date at job start Mon Mar 8 2021 06:54:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.43193 * 179.97438 * 2 1 4 4 C 1.39617 * 120.15021 * 187.46409 * 3 2 1 5 5 C 1.37968 * 119.85168 * 180.02562 * 4 3 2 6 6 C 1.38337 * 120.14629 * 359.73960 * 5 4 3 7 7 C 1.38389 * 120.30932 * 0.51915 * 6 5 4 8 8 C 1.50699 * 119.92615 * 179.76224 * 7 6 5 9 9 H 1.09003 * 112.84965 * 168.52615 * 8 7 6 10 10 C 1.53781 * 113.61310 * 299.72074 * 8 7 6 11 11 C 1.53779 * 87.07813 * 140.06758 * 10 8 7 12 12 H 1.08998 * 113.61414 * 219.93182 * 11 10 8 13 13 N 1.46497 * 113.61561 * 89.11705 * 11 10 8 14 14 C 1.39004 * 120.00202 * 154.99696 * 13 11 10 15 15 N 1.32394 * 119.71023 * 179.97438 * 14 13 11 16 16 C 1.31973 * 121.62797 * 180.02562 * 15 14 13 17 17 C 1.38019 * 120.85191 * 0.26010 * 16 15 14 18 18 C 1.50703 * 120.33199 * 179.72365 * 17 16 15 19 19 O 1.42894 * 109.47266 * 119.99566 * 18 17 16 20 20 Si 1.86298 * 109.47235 * 359.97438 * 18 17 16 21 21 C 1.38882 * 119.33362 * 359.49158 * 17 16 15 22 22 C 1.38303 * 118.50152 * 0.49484 * 21 17 16 23 23 C 1.53780 * 113.69022 * 37.25938 * 8 7 6 24 24 C 1.37926 * 120.14657 * 359.48521 * 7 6 5 25 25 H 1.08003 * 120.07539 * 0.04536 * 4 3 2 26 26 H 1.07994 * 119.92792 * 180.02562 * 5 4 3 27 27 H 1.08004 * 119.84753 * 180.25664 * 6 5 4 28 28 H 1.08995 * 113.61557 * 25.52092 * 10 8 7 29 29 H 1.09003 * 113.69017 * 254.62387 * 10 8 7 30 30 H 0.97001 * 120.00213 * 334.99946 * 13 11 10 31 31 H 1.08002 * 119.57103 * 179.97438 * 16 15 14 32 32 H 1.08997 * 109.46604 * 239.99254 * 18 17 16 33 33 H 0.96698 * 114.00137 * 300.00159 * 19 18 17 34 34 H 1.48498 * 110.00039 * 180.02562 * 20 18 17 35 35 H 1.48500 * 109.99961 * 301.31903 * 20 18 17 36 36 H 1.07994 * 120.75153 * 180.25022 * 21 17 16 37 37 H 1.08004 * 120.45124 * 179.77718 * 22 21 17 38 38 H 1.08998 * 113.61350 * 105.45750 * 23 8 7 39 39 H 1.09000 * 113.61460 * 334.55391 * 23 8 7 40 40 H 1.08001 * 120.07858 * 180.23549 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2687 1.1980 0.1568 5 6 4.6484 1.1916 0.1554 6 6 5.3374 0.0016 0.0044 7 6 4.6493 -1.1883 -0.1569 8 6 5.4087 -2.4789 -0.3260 9 1 4.7709 -3.3591 -0.2442 10 6 6.3271 -2.4962 -1.5594 11 6 7.3581 -3.2276 -0.6836 12 1 8.3839 -2.8990 -0.8502 13 7 7.2172 -4.6856 -0.7051 14 6 8.3131 -5.4940 -0.4262 15 7 8.1792 -6.8110 -0.4467 16 6 9.1939 -7.6139 -0.1873 17 6 10.4387 -7.1042 0.1219 18 6 11.5878 -8.0319 0.4221 19 8 12.6402 -7.8063 -0.5178 20 14 11.0094 -9.7983 0.2954 21 6 10.6229 -5.7279 0.1489 22 6 9.5410 -4.9118 -0.1273 23 6 6.6849 -2.5614 0.5280 24 6 3.2701 -1.1963 -0.1574 25 1 2.7319 2.1272 0.2793 26 1 5.1916 2.1170 0.2770 27 1 6.4174 0.0016 0.0081 28 1 6.6495 -1.5048 -1.8776 29 1 5.9449 -3.1012 -2.3816 30 1 6.3592 -5.0870 -0.9140 31 1 9.0472 -8.6836 -0.2130 32 1 11.9545 -7.8413 1.4308 33 1 12.3847 -7.9572 -1.4381 34 1 12.1333 -10.7231 0.5899 35 1 9.8937 -10.0368 1.2459 36 1 11.5881 -5.3045 0.3841 37 1 9.6479 -3.8372 -0.1115 38 1 6.5905 -3.2196 1.3916 39 1 7.1051 -1.5879 0.7803 40 1 2.7342 -2.1260 -0.2795 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15356834_13915762.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:54:28 Heat of formation + Delta-G solvation = 99.715963 kcal Electronic energy + Delta-G solvation = -23121.254017 eV Core-core repulsion = 19675.622882 eV Total energy + Delta-G solvation = -3445.631135 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.127 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.81975 -41.11758 -39.67186 -37.90763 -37.34879 -35.43177 -33.43087 -32.43632 -32.40087 -30.93544 -26.96553 -26.93466 -25.90502 -25.04611 -24.66540 -23.11270 -22.61122 -20.75747 -19.44236 -18.65710 -18.45457 -17.52847 -17.45192 -16.89151 -16.57868 -16.28825 -16.14341 -15.96730 -15.46865 -15.39558 -15.07670 -14.87021 -14.65451 -14.25910 -14.19148 -14.09523 -14.03676 -13.74918 -13.69174 -13.35815 -13.21496 -12.96791 -12.71013 -12.38697 -12.05381 -11.99146 -11.97140 -11.46313 -11.15791 -10.74905 -10.40096 -10.39580 -10.10604 -9.88427 -8.75145 -5.04144 -0.33850 0.13716 0.22102 0.40471 1.30316 1.62185 1.67786 1.88021 1.94335 1.97907 2.73631 2.80732 2.82312 3.22304 3.42121 3.46899 3.48639 3.56810 3.65681 3.73968 3.76047 3.87437 3.90024 3.96484 4.04977 4.07672 4.28085 4.30566 4.34916 4.48939 4.52202 4.55516 4.62755 4.71068 4.74825 4.80823 4.83676 4.94668 5.00849 5.14490 5.17929 5.29447 5.36985 5.50280 5.64684 5.96492 6.47112 6.48627 6.57984 7.12731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.249 3.751 3 C -0.024 4.024 4 C -0.074 4.074 5 C -0.115 4.115 6 C -0.087 4.087 7 C -0.072 4.072 8 C -0.073 4.073 9 H 0.101 0.899 10 C -0.136 4.136 11 C 0.128 3.872 12 H 0.101 0.899 13 N -0.705 5.705 14 C 0.410 3.590 15 N -0.539 5.539 16 C 0.156 3.844 17 C -0.235 4.235 18 C -0.052 4.052 19 O -0.543 6.543 20 Si 0.682 3.318 21 C -0.006 4.006 22 C -0.238 4.238 23 C -0.150 4.150 24 C -0.067 4.067 25 H 0.133 0.867 26 H 0.135 0.865 27 H 0.132 0.868 28 H 0.101 0.899 29 H 0.080 0.920 30 H 0.407 0.593 31 H 0.155 0.845 32 H 0.112 0.888 33 H 0.379 0.621 34 H -0.253 1.253 35 H -0.256 1.256 36 H 0.136 0.864 37 H 0.135 0.865 38 H 0.078 0.922 39 H 0.097 0.903 40 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.503 1.995 -2.073 5.344 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.066 4.066 3 C -0.028 4.028 4 C -0.094 4.094 5 C -0.133 4.133 6 C -0.106 4.106 7 C -0.072 4.072 8 C -0.092 4.092 9 H 0.119 0.881 10 C -0.174 4.174 11 C 0.022 3.978 12 H 0.119 0.881 13 N -0.337 5.337 14 C 0.174 3.826 15 N -0.256 5.256 16 C -0.002 4.002 17 C -0.240 4.240 18 C -0.164 4.164 19 O -0.348 6.348 20 Si 0.584 3.416 21 C -0.031 4.031 22 C -0.262 4.262 23 C -0.189 4.189 24 C -0.087 4.087 25 H 0.151 0.849 26 H 0.153 0.847 27 H 0.149 0.851 28 H 0.119 0.881 29 H 0.099 0.901 30 H 0.243 0.757 31 H 0.171 0.829 32 H 0.129 0.871 33 H 0.226 0.774 34 H -0.178 1.178 35 H -0.181 1.181 36 H 0.154 0.846 37 H 0.153 0.847 38 H 0.096 0.904 39 H 0.115 0.885 40 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 2.174 1.205 -1.303 2.807 hybrid contribution 0.799 0.795 0.549 1.254 sum 2.973 2.000 -0.754 3.661 Atomic orbital electron populations 1.81314 1.12059 1.06914 1.08323 1.25740 0.92703 0.94128 0.94044 1.15989 0.84320 0.95189 1.07263 1.21245 0.94542 0.96745 0.96896 1.21126 0.93578 0.98691 0.99943 1.21285 1.00578 0.91736 0.97010 1.19595 0.92750 0.95042 0.99806 1.21592 0.95126 0.95107 0.97349 0.88092 1.23453 0.95548 1.01682 0.96701 1.21866 1.00070 0.79200 0.96702 0.88145 1.44149 1.10401 1.03540 1.75598 1.18353 0.86892 0.87761 0.89562 1.67125 1.33905 1.03018 1.21553 1.22212 0.87345 0.98559 0.92058 1.21004 0.96898 0.95824 1.10266 1.24777 0.88729 1.07664 0.95240 1.86488 1.36236 1.92590 1.19458 0.94857 0.80458 0.75639 0.90663 1.21196 0.98324 0.92266 0.91362 1.21503 0.92736 1.01212 1.10789 1.23691 0.95419 1.01894 0.97875 1.21095 0.93693 0.96829 0.97132 0.84895 0.84678 0.85052 0.88066 0.90140 0.75702 0.82852 0.87063 0.77418 1.17818 1.18107 0.84611 0.84735 0.90371 0.88453 0.85014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.02 18.54 41.84 0.78 -1.25 16 2 C 0.25 0.50 15.33 -22.47 -0.34 0.15 16 3 C -0.02 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.16 9.76 -39.17 -0.38 -0.23 16 5 C -0.12 0.39 10.03 -39.64 -0.40 -0.01 16 6 C -0.09 0.32 8.62 -39.49 -0.34 -0.02 16 7 C -0.07 0.22 5.28 -104.68 -0.55 -0.34 16 8 C -0.07 0.29 3.85 -90.96 -0.35 -0.06 16 9 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 10 C -0.14 0.60 7.29 -25.92 -0.19 0.41 16 11 C 0.13 -0.48 4.11 -67.12 -0.28 -0.76 16 12 H 0.10 -0.43 6.10 -51.93 -0.32 -0.75 16 13 N -0.71 1.17 5.43 -53.14 -0.29 0.88 16 14 C 0.41 0.25 7.65 -155.02 -1.19 -0.94 16 15 N -0.54 -1.06 10.39 -12.44 -0.13 -1.19 16 16 C 0.16 0.10 9.84 -17.57 -0.17 -0.08 16 17 C -0.23 0.00 5.40 -104.46 -0.56 -0.57 16 18 C -0.05 0.03 2.84 36.01 0.10 0.13 16 19 O -0.54 0.13 12.78 -35.23 -0.45 -0.32 16 20 Si 0.68 -0.85 29.82 -169.99 -5.07 -5.92 16 21 C -0.01 0.00 9.76 -39.32 -0.38 -0.38 16 22 C -0.24 0.09 9.29 -39.22 -0.36 -0.28 16 23 C -0.15 0.60 7.25 -25.92 -0.19 0.41 16 24 C -0.07 0.12 9.41 -39.17 -0.37 -0.24 16 25 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 26 H 0.14 -0.70 8.06 -52.49 -0.42 -1.12 16 27 H 0.13 -0.73 6.63 -52.48 -0.35 -1.08 16 28 H 0.10 -0.52 7.73 -51.93 -0.40 -0.92 16 29 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.41 -0.78 8.82 -40.82 -0.36 -1.14 16 31 H 0.15 -0.19 4.88 -52.49 -0.26 -0.45 16 32 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 33 H 0.38 -1.48 8.70 45.56 0.40 -1.09 16 34 H -0.25 -0.51 7.11 56.52 0.40 -0.10 16 35 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 36 H 0.14 -0.16 8.06 -52.49 -0.42 -0.58 16 37 H 0.13 -0.32 6.03 -52.48 -0.32 -0.64 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.10 -0.49 6.30 -51.93 -0.33 -0.82 16 40 H 0.13 -0.36 8.05 -52.49 -0.42 -0.78 16 LS Contribution 342.38 15.07 5.16 5.16 Total: 0.00 -7.76 342.38 -11.07 -18.83 By element: Atomic # 1 Polarization: -8.31 SS G_CDS: -4.50 Total: -12.81 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: -6.57 Total: -3.38 kcal Atomic # 7 Polarization: -1.91 SS G_CDS: 0.36 Total: -1.56 kcal Atomic # 8 Polarization: 0.13 SS G_CDS: -0.45 Total: -0.32 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.07 Total: -5.92 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -7.76 -11.07 -18.83 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15356834_13915762.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.550 kcal (2) G-P(sol) polarization free energy of solvation -7.763 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.834 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.716 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds