Wall clock time and date at job start Mon Mar 8 2021 06:23:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86293 * 109.46890 * 2 1 4 4 C 1.50702 * 109.46971 * 240.00073 * 2 1 3 5 5 C 1.38609 * 120.71961 * 299.99707 * 4 2 1 6 6 N 1.32279 * 119.19420 * 179.97438 * 5 4 2 7 7 C 1.32490 * 120.74029 * 0.02562 * 6 5 4 8 8 N 1.38408 * 119.21405 * 179.97438 * 7 6 5 9 9 C 1.46499 * 119.99788 * 179.72008 * 8 7 6 10 10 H 1.09002 * 112.85201 * 24.07926 * 9 8 7 11 11 C 1.53784 * 113.61491 * 155.27847 * 9 8 7 12 12 C 1.53783 * 87.08338 * 139.98310 * 11 9 8 13 13 H 1.09004 * 113.61283 * 220.02107 * 12 11 9 14 14 N 1.46498 * 113.61829 * 89.19725 * 12 11 9 15 15 C 1.34941 * 126.04009 * 275.00335 * 14 12 11 16 16 C 1.35315 * 107.74866 * 179.97438 * 15 14 12 17 17 C 1.39874 * 107.91693 * 359.97438 * 16 15 14 18 18 N 1.30833 * 108.20358 * 359.74256 * 17 16 15 19 19 C 1.53780 * 87.07825 * 334.56565 * 12 11 9 20 20 N 1.32496 * 121.56933 * 0.26944 * 7 6 5 21 21 C 1.32280 * 120.73454 * 359.44648 * 20 7 6 22 22 H 0.96697 * 113.99914 * 60.00106 * 1 2 3 23 23 H 1.08997 * 109.46869 * 119.99771 * 2 1 3 24 24 H 1.48497 * 110.00269 * 59.99869 * 3 2 1 25 25 H 1.48499 * 110.00211 * 181.31986 * 3 2 1 26 26 H 1.08000 * 120.40170 * 0.02562 * 5 4 2 27 27 H 0.97001 * 120.00363 * 0.02562 * 8 7 6 28 28 H 1.09000 * 113.61044 * 254.52540 * 11 9 8 29 29 H 1.08999 * 113.61555 * 25.34324 * 11 9 8 30 30 H 1.08003 * 126.12354 * 359.95351 * 15 14 12 31 31 H 1.08003 * 126.03886 * 180.02562 * 16 15 14 32 32 H 1.08001 * 125.89161 * 180.02562 * 17 16 15 33 33 H 1.08998 * 113.61772 * 270.88604 * 19 12 11 34 34 H 1.09001 * 113.61751 * 139.98662 * 19 12 11 35 35 H 1.08003 * 120.39866 * 180.29440 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.6057 -2.0372 -1.4646 6 7 2.0626 -2.6310 -2.5547 7 6 2.8232 -1.9722 -3.4166 8 7 3.2845 -2.6247 -4.5467 9 6 4.1216 -1.9109 -5.5142 10 1 4.6487 -1.0642 -5.0744 11 6 5.0265 -2.8352 -6.3460 12 6 4.6996 -1.9393 -7.5524 13 1 4.5433 -2.4933 -8.4780 14 7 5.6210 -0.8117 -7.7129 15 6 5.5280 0.3839 -7.0942 16 6 6.5670 1.1450 -7.5093 17 6 7.3211 0.3883 -8.4122 18 7 6.7583 -0.7868 -8.5306 19 6 3.3946 -1.5723 -6.8263 20 7 3.1575 -0.7054 -3.2195 21 6 2.7293 -0.0513 -2.1524 22 1 -0.3933 0.4417 -0.7650 23 1 1.7923 -0.5138 0.8900 24 1 1.5614 2.4679 1.2084 25 1 3.5346 1.7704 -0.0321 26 1 0.9857 -2.5793 -0.7659 27 1 3.0499 -3.5533 -4.7004 28 1 6.0748 -2.8023 -6.0492 29 1 4.6446 -3.8518 -6.4390 30 1 4.7615 0.6803 -6.3935 31 1 6.7773 2.1575 -7.1977 32 1 8.2161 0.7160 -8.9201 33 1 2.5658 -2.2433 -7.0519 34 1 3.1253 -0.5200 -6.9173 35 1 3.0012 0.9827 -1.9996 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494094_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:09 Heat of formation + Delta-G solvation = 150.206235 kcal Electronic energy + Delta-G solvation = -20439.728213 eV Core-core repulsion = 17250.113100 eV Total energy + Delta-G solvation = -3189.615113 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.49289 -42.06340 -40.05360 -38.10862 -35.84068 -34.76003 -32.68726 -31.46037 -30.91342 -27.20337 -27.09481 -26.08492 -25.32153 -23.29196 -22.49822 -21.80909 -20.58890 -19.42554 -18.97276 -18.16424 -17.95344 -17.01608 -16.67282 -16.22788 -16.07092 -15.82910 -15.54131 -15.38193 -15.25215 -14.66302 -14.29362 -14.09048 -13.98255 -13.68462 -13.44128 -13.37228 -13.07461 -12.41103 -12.24632 -11.93462 -11.86872 -11.82596 -11.53467 -11.37328 -10.65587 -10.31335 -10.08253 -9.49675 -9.21256 -5.16078 -0.01075 0.08904 0.96896 1.17461 1.45476 1.50900 1.69401 1.88089 1.99552 2.72314 2.93729 3.06525 3.18961 3.34253 3.44112 3.54936 3.63480 3.67387 3.75852 3.86807 4.02157 4.14232 4.23699 4.32765 4.41526 4.44315 4.53493 4.63631 4.65621 4.74243 4.82713 4.91080 5.15236 5.17988 5.67152 5.76889 5.90385 6.10518 6.30247 6.46155 6.81825 7.20441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.047 4.047 3 Si 0.682 3.318 4 C -0.292 4.292 5 C 0.224 3.776 6 N -0.568 5.568 7 C 0.567 3.433 8 N -0.684 5.684 9 C 0.138 3.862 10 H 0.124 0.876 11 C -0.156 4.156 12 C 0.140 3.860 13 H 0.118 0.882 14 N -0.359 5.359 15 C 0.054 3.946 16 C -0.272 4.272 17 C 0.046 3.954 18 N -0.294 5.294 19 C -0.157 4.157 20 N -0.563 5.563 21 C 0.199 3.801 22 H 0.379 0.621 23 H 0.116 0.884 24 H -0.250 1.250 25 H -0.255 1.255 26 H 0.171 0.829 27 H 0.416 0.584 28 H 0.086 0.914 29 H 0.107 0.893 30 H 0.174 0.826 31 H 0.149 0.851 32 H 0.184 0.816 33 H 0.110 0.890 34 H 0.086 0.914 35 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.087 1.897 -0.494 2.863 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.159 4.159 3 Si 0.583 3.417 4 C -0.300 4.300 5 C 0.055 3.945 6 N -0.289 5.289 7 C 0.210 3.790 8 N -0.320 5.320 9 C 0.032 3.968 10 H 0.141 0.859 11 C -0.195 4.195 12 C 0.036 3.964 13 H 0.136 0.864 14 N -0.142 5.142 15 C -0.092 4.092 16 C -0.301 4.301 17 C -0.140 4.140 18 N -0.115 5.115 19 C -0.197 4.197 20 N -0.285 5.285 21 C 0.031 3.969 22 H 0.227 0.773 23 H 0.133 0.867 24 H -0.175 1.175 25 H -0.180 1.180 26 H 0.188 0.812 27 H 0.255 0.745 28 H 0.105 0.895 29 H 0.126 0.874 30 H 0.191 0.809 31 H 0.167 0.833 32 H 0.201 0.799 33 H 0.129 0.871 34 H 0.105 0.895 35 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -1.078 0.530 -1.022 1.577 hybrid contribution -0.317 0.275 1.283 1.350 sum -1.395 0.806 0.261 1.632 Atomic orbital electron populations 1.86514 1.17088 1.81620 1.49305 1.24711 0.85146 1.09643 0.96398 0.94982 0.80998 0.77713 0.87988 1.21735 1.07867 0.98449 1.01973 1.22856 0.90198 0.90577 0.90830 1.67997 1.16024 1.39243 1.05642 1.19414 0.86856 0.85726 0.86966 1.44123 1.53855 1.14431 1.19586 1.22695 0.91073 0.96392 0.86631 0.85856 1.23871 1.01801 0.99376 0.94487 1.21794 0.88431 0.86415 0.99740 0.86446 1.48365 1.20780 1.10841 1.34177 1.22571 1.00803 0.86562 0.99249 1.21568 0.99231 1.02778 1.06560 1.23974 1.00310 0.91243 0.98498 1.77409 0.97773 1.21522 1.14748 1.23994 0.96342 1.04287 0.95120 1.67876 1.28122 1.08575 1.23921 1.22799 0.88515 0.98828 0.86742 0.77340 0.86654 1.17452 1.17971 0.81167 0.74530 0.89544 0.87439 0.80878 0.83341 0.79876 0.87149 0.89491 0.81623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.72 12.79 -35.23 -0.45 0.27 16 2 C -0.05 0.08 2.85 36.01 0.10 0.19 16 3 Si 0.68 -1.69 29.87 -169.99 -5.08 -6.76 16 4 C -0.29 0.24 5.40 -104.35 -0.56 -0.32 16 5 C 0.22 0.08 10.92 -17.22 -0.19 -0.11 16 6 N -0.57 -1.09 10.46 -13.93 -0.15 -1.24 16 7 C 0.57 0.83 8.42 -322.81 -2.72 -1.89 16 8 N -0.68 0.52 5.50 -55.00 -0.30 0.22 16 9 C 0.14 -0.23 3.83 -67.12 -0.26 -0.49 16 10 H 0.12 -0.04 6.21 -51.93 -0.32 -0.36 16 11 C -0.16 0.32 7.63 -25.92 -0.20 0.12 16 12 C 0.14 -0.17 5.18 -67.12 -0.35 -0.52 16 13 H 0.12 -0.19 8.14 -51.93 -0.42 -0.62 16 14 N -0.36 -0.50 3.79 -54.07 -0.21 -0.70 16 15 C 0.05 0.02 9.63 -17.23 -0.17 -0.14 16 16 C -0.27 -0.24 10.80 -40.01 -0.43 -0.67 16 17 C 0.05 0.09 12.03 -17.36 -0.21 -0.12 16 18 N -0.29 -1.08 12.58 30.62 0.39 -0.70 16 19 C -0.16 0.42 7.13 -25.92 -0.18 0.24 16 20 N -0.56 -0.61 9.13 -13.93 -0.13 -0.74 16 21 C 0.20 -0.12 9.92 -17.23 -0.17 -0.29 16 22 H 0.38 -1.88 8.70 45.56 0.40 -1.49 16 23 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 24 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 25 H -0.25 0.05 7.11 56.52 0.40 0.45 16 26 H 0.17 -0.21 8.06 -52.49 -0.42 -0.64 16 27 H 0.42 -0.82 8.84 -40.82 -0.36 -1.18 16 28 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.11 -0.41 8.12 -51.93 -0.42 -0.83 16 30 H 0.17 -0.34 6.67 -52.48 -0.35 -0.69 16 31 H 0.15 -0.15 8.06 -52.48 -0.42 -0.58 16 32 H 0.18 -0.15 8.06 -52.49 -0.42 -0.58 16 33 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 34 H 0.09 -0.21 6.98 -51.93 -0.36 -0.57 16 35 H 0.17 -0.51 5.04 -52.48 -0.26 -0.78 16 LS Contribution 299.19 15.07 4.51 4.51 Total: 0.00 -8.14 299.19 -10.58 -18.72 By element: Atomic # 1 Polarization: -5.73 SS G_CDS: -3.83 Total: -9.56 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -5.33 Total: -4.02 kcal Atomic # 7 Polarization: -2.77 SS G_CDS: -0.40 Total: -3.16 kcal Atomic # 8 Polarization: 0.72 SS G_CDS: -0.45 Total: 0.27 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.08 Total: -6.76 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -8.14 -10.58 -18.72 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494094_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 168.930 kcal (2) G-P(sol) polarization free energy of solvation -8.142 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 160.788 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.724 kcal (6) G-S(sol) free energy of system = (1) + (5) 150.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds