Wall clock time and date at job start Mon Mar 8 2021 06:23:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86297 * 109.46813 * 2 1 4 4 C 1.50700 * 109.46978 * 119.99306 * 2 1 3 5 5 C 1.38021 * 120.33839 * 244.98082 * 4 2 1 6 6 N 1.31975 * 120.85607 * 180.02562 * 5 4 2 7 7 C 1.32393 * 121.62238 * 359.97438 * 6 5 4 8 8 N 1.39001 * 119.70339 * 179.97438 * 7 6 5 9 9 C 1.46501 * 119.99927 * 180.02562 * 8 7 6 10 10 H 1.09000 * 112.84965 * 334.67190 * 9 8 7 11 11 C 1.53787 * 113.61311 * 105.86532 * 9 8 7 12 12 C 1.54061 * 86.98430 * 89.16365 * 11 9 8 13 13 H 1.09001 * 113.68534 * 270.87937 * 12 11 9 14 14 N 1.46496 * 113.62064 * 139.97966 * 12 11 9 15 15 C 1.34950 * 126.03693 * 347.50177 * 14 12 11 16 16 C 1.35311 * 107.74569 * 179.97438 * 15 14 12 17 17 C 1.39871 * 107.92327 * 0.02562 * 16 15 14 18 18 N 1.30838 * 108.19727 * 359.73351 * 17 16 15 19 19 C 1.53785 * 87.07740 * 25.42923 * 12 11 9 20 20 C 1.39141 * 120.58896 * 0.02562 * 7 6 5 21 21 C 1.38298 * 119.09793 * 359.97438 * 20 7 6 22 22 H 0.96693 * 114.00517 * 299.99865 * 1 2 3 23 23 H 1.08990 * 109.47538 * 240.00012 * 2 1 3 24 24 H 1.48494 * 110.00269 * 178.67718 * 3 2 1 25 25 H 1.48502 * 110.00056 * 300.00011 * 3 2 1 26 26 H 1.07999 * 119.57054 * 0.04501 * 5 4 2 27 27 H 0.97000 * 120.00503 * 0.02562 * 8 7 6 28 28 H 1.09000 * 113.61125 * 203.66349 * 11 9 8 29 29 H 1.08995 * 113.61200 * 334.57320 * 11 9 8 30 30 H 1.08002 * 126.12778 * 359.96376 * 15 14 12 31 31 H 1.07998 * 126.03948 * 179.97438 * 16 15 14 32 32 H 1.07997 * 125.90047 * 180.02562 * 17 16 15 33 33 H 1.08989 * 113.61661 * 220.02284 * 19 12 11 34 34 H 1.09002 * 113.68556 * 89.13036 * 19 12 11 35 35 H 1.08004 * 120.44656 * 179.97438 * 20 7 6 36 36 H 1.07994 * 120.74333 * 180.28293 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2306 5 6 2.6387 -0.0200 2.1940 6 7 3.0838 -0.6319 3.2753 7 6 2.8715 -1.9227 3.4795 8 7 3.3589 -2.5269 4.6325 9 6 3.1283 -3.9549 4.8647 10 1 2.2446 -4.3303 4.3488 11 6 4.3800 -4.8233 4.6541 12 6 4.7002 -4.5788 6.1411 13 1 5.3016 -3.6871 6.3186 14 7 5.2190 -5.7618 6.8320 15 6 5.2032 -7.0266 6.3616 16 6 5.7742 -7.8213 7.2961 17 6 6.1514 -7.0148 8.3748 18 7 5.8239 -5.7793 8.0953 19 6 3.1927 -4.3561 6.3479 20 6 2.1659 -2.6800 2.5496 21 6 1.6871 -2.0661 1.4066 22 1 -0.3934 0.4416 0.7650 23 1 1.7924 -0.5138 -0.8899 24 1 3.5345 1.7704 0.0322 25 1 1.5614 2.4679 -1.2085 26 1 2.8302 1.0345 2.0614 27 1 3.8517 -2.0031 5.2834 28 1 4.1551 -5.8641 4.4213 29 1 5.1068 -4.3832 3.9714 30 1 4.8058 -7.3471 5.4099 31 1 5.9133 -8.8898 7.2224 32 1 6.6342 -7.3528 9.2798 33 1 2.9617 -3.5393 7.0316 34 1 2.6427 -5.2688 6.5776 35 1 1.9945 -3.7329 2.7183 36 1 1.1323 -2.6275 0.6696 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494094_13915762.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:11 Heat of formation + Delta-G solvation = 133.010908 kcal Electronic energy + Delta-G solvation = -19952.090768 eV Core-core repulsion = 16827.155921 eV Total energy + Delta-G solvation = -3124.934848 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.122 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.38141 -41.51550 -40.16667 -37.91678 -35.55617 -33.50534 -32.41216 -31.03777 -30.87781 -27.21872 -26.83448 -25.74979 -24.77139 -23.02558 -22.05874 -21.95908 -20.28537 -19.31746 -18.50006 -18.24006 -17.56164 -16.72677 -16.59035 -16.11400 -16.00984 -15.80173 -15.44987 -15.26956 -14.95475 -14.48169 -14.24117 -14.15560 -14.06702 -13.73688 -13.48194 -13.43818 -13.09680 -12.46810 -12.32739 -12.05781 -11.93643 -11.52680 -11.30413 -10.81523 -10.46860 -10.43595 -10.34267 -9.52275 -8.86130 -5.06137 0.15450 0.34051 0.94286 1.27523 1.50350 1.61017 1.81472 1.96111 1.96252 2.73332 2.86100 3.12028 3.32765 3.43922 3.50274 3.56718 3.71472 3.77414 3.87845 3.95303 3.99517 4.15757 4.23569 4.26756 4.32743 4.46697 4.50133 4.57612 4.65023 4.69722 4.71294 4.88817 4.92731 5.11200 5.22992 5.40825 5.73757 5.85151 6.06225 6.36152 6.55484 6.79439 7.05044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.053 4.053 3 Si 0.680 3.320 4 C -0.232 4.232 5 C 0.157 3.843 6 N -0.537 5.537 7 C 0.409 3.591 8 N -0.708 5.708 9 C 0.137 3.863 10 H 0.111 0.889 11 C -0.162 4.162 12 C 0.139 3.861 13 H 0.121 0.879 14 N -0.364 5.364 15 C 0.051 3.949 16 C -0.273 4.273 17 C 0.045 3.955 18 N -0.297 5.297 19 C -0.152 4.152 20 C -0.237 4.237 21 C -0.005 4.005 22 H 0.379 0.621 23 H 0.112 0.888 24 H -0.256 1.256 25 H -0.253 1.253 26 H 0.156 0.844 27 H 0.408 0.592 28 H 0.104 0.896 29 H 0.090 0.910 30 H 0.172 0.828 31 H 0.148 0.852 32 H 0.184 0.816 33 H 0.089 0.911 34 H 0.105 0.895 35 H 0.135 0.865 36 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.063 -1.646 -0.127 2.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.165 4.165 3 Si 0.582 3.418 4 C -0.237 4.237 5 C 0.000 4.000 6 N -0.253 5.253 7 C 0.174 3.826 8 N -0.340 5.340 9 C 0.030 3.970 10 H 0.129 0.871 11 C -0.203 4.203 12 C 0.036 3.964 13 H 0.139 0.861 14 N -0.146 5.146 15 C -0.094 4.094 16 C -0.302 4.302 17 C -0.141 4.141 18 N -0.118 5.118 19 C -0.191 4.191 20 C -0.261 4.261 21 C -0.031 4.031 22 H 0.226 0.774 23 H 0.130 0.870 24 H -0.181 1.181 25 H -0.178 1.178 26 H 0.173 0.827 27 H 0.245 0.755 28 H 0.122 0.878 29 H 0.109 0.891 30 H 0.189 0.811 31 H 0.166 0.834 32 H 0.200 0.800 33 H 0.108 0.892 34 H 0.124 0.876 35 H 0.153 0.847 36 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -1.112 0.257 -0.126 1.149 hybrid contribution -0.035 -1.859 -0.754 2.006 sum -1.147 -1.602 -0.880 2.158 Atomic orbital electron populations 1.86498 1.17277 1.81678 1.49279 1.24789 0.85056 1.09711 0.96902 0.94902 0.81203 0.78061 0.87651 1.21026 1.06627 0.96065 1.00017 1.22203 0.91403 0.98773 0.87613 1.67115 1.25573 1.08970 1.23687 1.18318 0.89243 0.88482 0.86573 1.44140 1.60651 1.07948 1.21249 1.21614 0.98147 0.80408 0.96877 0.87125 1.24102 0.99314 1.02127 0.94708 1.22988 0.94579 0.87200 0.91587 0.86101 1.48703 1.46019 1.06075 1.13802 1.22476 1.01670 0.84800 1.00485 1.21571 1.11583 1.01199 0.95862 1.23964 0.99783 0.90393 0.99989 1.77397 1.16424 1.21453 0.96501 1.23868 0.95201 1.03728 0.96301 1.21494 1.06452 1.01479 0.96715 1.21215 0.93086 0.93419 0.95393 0.77403 0.87038 1.18053 1.17756 0.82722 0.75523 0.87754 0.89121 0.81070 0.83405 0.79951 0.89214 0.87620 0.84747 0.84566 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.13 12.84 -35.23 -0.45 -0.32 16 2 C -0.05 0.04 2.82 36.01 0.10 0.14 16 3 Si 0.68 -0.89 29.83 -169.99 -5.07 -5.96 16 4 C -0.23 0.03 5.36 -104.46 -0.56 -0.53 16 5 C 0.16 0.06 9.84 -17.57 -0.17 -0.11 16 6 N -0.54 -0.97 10.39 -12.44 -0.13 -1.09 16 7 C 0.41 0.18 7.65 -155.03 -1.19 -1.00 16 8 N -0.71 1.16 5.44 -53.14 -0.29 0.87 16 9 C 0.14 -0.48 4.07 -67.11 -0.27 -0.75 16 10 H 0.11 -0.48 6.17 -51.93 -0.32 -0.80 16 11 C -0.16 0.56 7.24 -25.77 -0.19 0.37 16 12 C 0.14 -0.21 4.93 -66.97 -0.33 -0.54 16 13 H 0.12 -0.14 8.14 -51.93 -0.42 -0.57 16 14 N -0.36 -0.42 3.81 -53.93 -0.21 -0.62 16 15 C 0.05 -0.01 10.69 -17.22 -0.18 -0.19 16 16 C -0.27 -0.19 10.80 -40.01 -0.43 -0.62 16 17 C 0.04 0.09 12.03 -17.36 -0.21 -0.12 16 18 N -0.30 -1.11 12.58 30.62 0.39 -0.72 16 19 C -0.15 0.43 7.62 -25.91 -0.20 0.23 16 20 C -0.24 0.14 9.28 -39.22 -0.36 -0.23 16 21 C -0.01 0.00 9.83 -39.32 -0.39 -0.39 16 22 H 0.38 -1.49 8.70 45.56 0.40 -1.09 16 23 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 24 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 25 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 26 H 0.16 -0.26 4.91 -52.49 -0.26 -0.51 16 27 H 0.41 -0.73 8.83 -40.82 -0.36 -1.09 16 28 H 0.10 -0.49 6.32 -51.93 -0.33 -0.82 16 29 H 0.09 -0.23 8.14 -51.93 -0.42 -0.66 16 30 H 0.17 -0.59 6.69 -52.49 -0.35 -0.94 16 31 H 0.15 -0.18 8.06 -52.49 -0.42 -0.60 16 32 H 0.18 -0.14 8.06 -52.49 -0.42 -0.56 16 33 H 0.09 -0.22 8.14 -51.94 -0.42 -0.64 16 34 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.13 -0.36 6.06 -52.48 -0.32 -0.68 16 36 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 LS Contribution 303.64 15.07 4.58 4.58 Total: 0.00 -8.08 303.64 -9.68 -17.75 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -4.11 Total: -10.74 kcal Atomic # 6 Polarization: 0.65 SS G_CDS: -4.38 Total: -3.73 kcal Atomic # 7 Polarization: -1.33 SS G_CDS: -0.24 Total: -1.57 kcal Atomic # 8 Polarization: 0.13 SS G_CDS: -0.45 Total: -0.32 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.07 Total: -5.96 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -8.08 -9.68 -17.75 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494094_13915762.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 150.763 kcal (2) G-P(sol) polarization free energy of solvation -8.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 142.687 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.676 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.752 kcal (6) G-S(sol) free energy of system = (1) + (5) 133.011 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds