Wall clock time and date at job start Mon Mar 8 2021 06:23:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33329 * 125.94840 * 2 1 4 4 C 1.50706 * 122.70991 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.46923 * 30.00044 * 4 3 2 6 6 Si 1.86298 * 109.46882 * 150.00067 * 4 3 2 7 7 N 1.32116 * 114.57709 * 179.82833 * 3 2 1 8 8 C 1.29690 * 116.86631 * 0.47656 * 7 3 2 9 9 N 1.38615 * 124.94685 * 179.73596 * 8 7 3 10 10 C 1.46499 * 119.99520 * 179.97438 * 9 8 7 11 11 H 1.08996 * 112.84943 * 23.80826 * 10 9 8 12 12 C 1.53787 * 113.61072 * 155.00685 * 10 9 8 13 13 C 1.53779 * 87.08062 * 139.97978 * 12 10 9 14 14 H 1.08994 * 113.61007 * 220.01380 * 13 12 10 15 15 N 1.46503 * 113.61426 * 89.19952 * 13 12 10 16 16 C 1.34944 * 126.03585 * 274.99686 * 15 13 12 17 17 C 1.35316 * 107.74888 * 179.97438 * 16 15 13 18 18 C 1.39871 * 107.91825 * 359.97438 * 17 16 15 19 19 N 1.30844 * 108.20176 * 359.74933 * 18 17 16 20 20 C 1.53778 * 87.08262 * 334.56723 * 13 12 10 21 21 S 1.70964 * 110.10081 * 359.74024 * 8 7 3 22 22 H 1.09001 * 109.46953 * 179.71216 * 1 2 3 23 23 H 1.09000 * 109.47318 * 299.70813 * 1 2 3 24 24 H 1.09000 * 109.47161 * 59.71444 * 1 2 3 25 25 H 1.08993 * 109.47146 * 270.00024 * 4 3 2 26 26 H 0.96706 * 114.00408 * 60.00372 * 5 4 3 27 27 H 1.48502 * 110.00204 * 180.02562 * 6 4 3 28 28 H 1.48505 * 109.99830 * 301.31868 * 6 4 3 29 29 H 0.97002 * 119.99984 * 359.97438 * 9 8 7 30 30 H 1.09004 * 113.60669 * 254.52908 * 12 10 9 31 31 H 1.08999 * 113.61618 * 25.34439 * 12 10 9 32 32 H 1.08004 * 126.13147 * 359.95842 * 16 15 13 33 33 H 1.07999 * 126.04054 * 180.02562 * 17 16 15 34 34 H 1.07999 * 125.90267 * 179.97438 * 18 17 16 35 35 H 1.09002 * 113.60879 * 270.88714 * 20 13 12 36 36 H 1.08998 * 113.61702 * 139.98772 * 20 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2898 1.0794 0.0000 4 6 1.7413 2.4831 0.0006 5 8 0.4815 2.5019 0.6747 6 14 2.9325 3.6148 0.8786 7 7 3.5850 0.8189 0.0036 8 6 3.9315 -0.4309 -0.0030 9 7 5.2385 -0.8924 -0.0059 10 6 5.5066 -2.3327 -0.0128 11 1 4.6804 -2.9150 -0.4206 12 6 6.8747 -2.7017 -0.6107 13 6 6.9933 -3.7493 0.5088 14 1 7.9938 -3.8214 0.9350 15 7 6.4311 -5.0545 0.1530 16 6 5.1367 -5.4190 0.2663 17 6 5.0287 -6.6969 -0.1654 18 6 6.3005 -7.1280 -0.5564 19 7 7.1410 -6.1424 -0.3713 20 6 6.0366 -2.8671 1.3282 21 16 2.5413 -1.4260 -0.0077 22 1 -0.3633 -1.0277 -0.0052 23 1 -0.3634 0.5093 0.8926 24 1 -0.3633 0.5183 -0.8874 25 1 1.6087 2.8217 -1.0269 26 1 0.5240 2.2119 1.5962 27 1 2.4029 5.0021 0.8867 28 1 3.1464 3.1453 2.2712 29 1 5.9756 -0.2618 -0.0033 30 1 6.8123 -3.1346 -1.6091 31 1 7.6116 -1.9015 -0.5416 32 1 4.3312 -4.8015 0.6356 33 1 4.1207 -7.2805 -0.2023 34 1 6.5458 -8.1044 -0.9473 35 1 6.5450 -2.1127 1.9286 36 1 5.2979 -3.4336 1.8952 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494094_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:14 Heat of formation + Delta-G solvation = 136.848802 kcal Electronic energy + Delta-G solvation = -20846.963750 eV Core-core repulsion = 17655.809953 eV Total energy + Delta-G solvation = -3191.153797 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.094 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.54314 -41.11501 -40.21226 -37.90314 -35.73000 -32.86398 -31.77445 -31.03723 -29.31181 -27.28482 -26.30395 -25.51198 -24.26300 -22.85683 -21.95709 -21.09669 -20.25320 -19.31956 -18.19424 -17.97472 -17.51818 -17.15443 -16.67195 -16.04509 -15.76557 -15.62712 -15.44072 -15.34106 -14.48825 -14.21692 -14.15015 -14.00627 -13.82573 -13.68189 -13.54268 -13.45450 -13.41602 -12.76294 -12.45502 -12.35160 -12.06233 -11.81205 -11.63186 -11.09643 -10.66979 -10.54588 -10.41479 -10.07110 -9.59678 -8.71269 -4.70044 -0.05206 0.09897 0.70170 0.85837 1.34476 1.34866 1.74427 1.79764 1.90500 1.91527 2.08135 2.77683 3.00115 3.20562 3.27094 3.44934 3.50720 3.72885 3.89184 4.00502 4.12129 4.21510 4.24086 4.28895 4.39978 4.51841 4.55733 4.59991 4.65463 4.74859 4.80366 4.84018 5.01681 5.06265 5.23374 5.45301 5.67661 5.99241 6.14569 6.33452 6.72051 6.87716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C -0.238 4.238 3 C 0.067 3.933 4 C -0.042 4.042 5 O -0.525 6.525 6 Si 0.722 3.278 7 N -0.535 5.535 8 C 0.317 3.683 9 N -0.682 5.682 10 C 0.126 3.874 11 H 0.110 0.890 12 C -0.149 4.149 13 C 0.140 3.860 14 H 0.121 0.879 15 N -0.360 5.360 16 C 0.048 3.952 17 C -0.268 4.268 18 C 0.047 3.953 19 N -0.291 5.291 20 C -0.159 4.159 21 S 0.097 5.903 22 H 0.059 0.941 23 H 0.080 0.920 24 H 0.077 0.923 25 H 0.124 0.876 26 H 0.375 0.625 27 H -0.260 1.260 28 H -0.268 1.268 29 H 0.416 0.584 30 H 0.089 0.911 31 H 0.112 0.888 32 H 0.170 0.830 33 H 0.150 0.850 34 H 0.186 0.814 35 H 0.116 0.884 36 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.753 -1.364 0.493 1.634 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 C -0.360 4.360 3 C -0.064 4.064 4 C -0.154 4.154 5 O -0.331 6.331 6 Si 0.622 3.378 7 N -0.261 5.261 8 C -0.054 4.054 9 N -0.322 5.322 10 C 0.020 3.980 11 H 0.127 0.873 12 C -0.188 4.188 13 C 0.036 3.964 14 H 0.139 0.861 15 N -0.143 5.143 16 C -0.098 4.098 17 C -0.297 4.297 18 C -0.139 4.139 19 N -0.111 5.111 20 C -0.199 4.199 21 S 0.346 5.654 22 H 0.078 0.922 23 H 0.098 0.902 24 H 0.095 0.905 25 H 0.142 0.858 26 H 0.223 0.777 27 H -0.186 1.186 28 H -0.192 1.192 29 H 0.255 0.745 30 H 0.108 0.892 31 H 0.131 0.869 32 H 0.187 0.813 33 H 0.168 0.832 34 H 0.203 0.797 35 H 0.135 0.865 36 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.199 -0.954 0.518 2.453 hybrid contribution -1.623 0.060 0.665 1.755 sum 0.577 -0.893 1.183 1.591 Atomic orbital electron populations 1.20158 0.86358 1.01749 1.03706 1.25141 1.01341 0.92662 1.16897 1.20094 0.86803 0.97198 1.02262 1.24478 0.91920 0.95296 1.03740 1.86629 1.28595 1.89033 1.28819 0.93639 0.86130 0.76454 0.81548 1.65730 1.17065 1.16400 1.26883 1.23305 0.91820 0.91484 0.98772 1.43868 1.01925 1.06224 1.80199 1.22785 0.98395 0.80069 0.96745 0.87255 1.23823 0.96436 0.98550 1.00027 1.21807 0.99268 0.78453 0.96888 0.86132 1.48378 1.05579 1.10698 1.49625 1.22500 0.87852 0.97380 1.02021 1.21584 0.99450 0.96112 1.12575 1.24001 0.91638 0.98686 0.99595 1.77432 1.20450 0.94370 1.18842 1.24057 0.99259 0.98978 0.97629 1.83915 0.96610 1.10811 1.74076 0.92230 0.90151 0.90454 0.85802 0.77667 1.18585 1.19230 0.74518 0.89226 0.86932 0.81258 0.83238 0.79744 0.86526 0.89378 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 0.01 8.90 36.01 0.32 0.33 16 2 C -0.24 -0.29 6.50 -36.02 -0.23 -0.53 16 3 C 0.07 0.12 5.92 -84.18 -0.50 -0.38 16 4 C -0.04 -0.04 2.94 36.01 0.11 0.07 16 5 O -0.53 -0.41 10.18 -35.23 -0.36 -0.77 16 6 Si 0.72 0.64 32.08 -169.99 -5.45 -4.82 16 7 N -0.53 -1.04 8.94 -11.36 -0.10 -1.14 16 8 C 0.32 0.18 8.24 -87.67 -0.72 -0.54 16 9 N -0.68 1.39 5.51 -54.99 -0.30 1.09 16 10 C 0.13 -0.40 3.81 -67.11 -0.26 -0.66 16 11 H 0.11 -0.28 5.90 -51.93 -0.31 -0.59 16 12 C -0.15 0.51 7.63 -25.92 -0.20 0.31 16 13 C 0.14 -0.33 5.18 -67.12 -0.35 -0.68 16 14 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 15 N -0.36 -0.13 3.79 -54.08 -0.21 -0.34 16 16 C 0.05 -0.03 9.62 -17.22 -0.17 -0.19 16 17 C -0.27 -0.02 10.80 -40.01 -0.43 -0.46 16 18 C 0.05 0.05 12.03 -17.36 -0.21 -0.16 16 19 N -0.29 -0.82 12.58 30.63 0.39 -0.43 16 20 C -0.16 0.62 7.13 -25.92 -0.18 0.43 16 21 S 0.10 0.00 21.69 -107.50 -2.33 -2.33 16 22 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.08 -0.07 6.41 -51.93 -0.33 -0.41 16 24 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 25 H 0.12 0.02 7.96 -51.93 -0.41 -0.39 16 26 H 0.38 -0.62 8.13 45.56 0.37 -0.25 16 27 H -0.26 -0.84 7.11 56.52 0.40 -0.44 16 28 H -0.27 -0.95 7.11 56.52 0.40 -0.55 16 29 H 0.42 -1.32 8.85 -40.82 -0.36 -1.68 16 30 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.11 -0.57 8.12 -51.93 -0.42 -1.00 16 32 H 0.17 -0.55 6.67 -52.48 -0.35 -0.90 16 33 H 0.15 -0.26 8.06 -52.49 -0.42 -0.68 16 34 H 0.19 -0.29 8.06 -52.49 -0.42 -0.71 16 35 H 0.12 -0.56 8.14 -51.93 -0.42 -0.99 16 36 H 0.09 -0.32 6.98 -51.93 -0.36 -0.69 16 LS Contribution 313.54 15.07 4.72 4.72 Total: 0.00 -7.12 313.54 -10.80 -17.92 By element: Atomic # 1 Polarization: -7.13 SS G_CDS: -4.33 Total: -11.47 kcal Atomic # 6 Polarization: 0.37 SS G_CDS: -2.82 Total: -2.45 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -0.22 Total: -0.82 kcal Atomic # 8 Polarization: -0.41 SS G_CDS: -0.36 Total: -0.77 kcal Atomic # 14 Polarization: 0.64 SS G_CDS: -5.45 Total: -4.82 kcal Atomic # 16 Polarization: 0.00 SS G_CDS: -2.33 Total: -2.33 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -7.12 -10.80 -17.92 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494094_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 154.771 kcal (2) G-P(sol) polarization free energy of solvation -7.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 147.648 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.923 kcal (6) G-S(sol) free energy of system = (1) + (5) 136.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds