Wall clock time and date at job start Mon Mar 8 2021 06:23:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47264 * 2 1 4 4 C 1.50697 * 109.47546 * 120.00752 * 2 1 3 5 5 C 1.37983 * 120.32395 * 244.99697 * 4 2 1 6 6 N 1.32011 * 120.90304 * 180.02562 * 5 4 2 7 7 C 1.32344 * 121.64136 * 0.02562 * 6 5 4 8 8 N 1.39140 * 119.71391 * 179.97438 * 7 6 5 9 9 C 1.46503 * 120.00393 * 0.02562 * 8 7 6 10 10 H 1.09000 * 112.84743 * 336.19215 * 9 8 7 11 11 C 1.53774 * 113.61794 * 107.49752 * 9 8 7 12 12 C 1.53784 * 87.08231 * 89.11794 * 11 9 8 13 13 H 1.08998 * 113.69005 * 270.87538 * 12 11 9 14 14 N 1.46500 * 113.61507 * 139.98103 * 12 11 9 15 15 C 1.34947 * 126.03750 * 347.22043 * 14 12 11 16 16 C 1.35317 * 107.74240 * 179.84062 * 15 14 12 17 17 C 1.39868 * 107.92365 * 0.41985 * 16 15 14 18 18 N 1.30840 * 108.19886 * 359.74181 * 17 16 15 19 19 C 1.53784 * 113.61379 * 205.00008 * 9 8 7 20 20 C 1.39335 * 120.56596 * 359.97438 * 7 6 5 21 21 F 1.35102 * 120.47369 * 179.97438 * 20 7 6 22 22 C 1.38443 * 119.05810 * 0.02562 * 20 7 6 23 23 H 0.96705 * 113.99760 * 299.99464 * 1 2 3 24 24 H 1.09001 * 109.46650 * 240.00241 * 2 1 3 25 25 H 1.48498 * 110.00217 * 300.00530 * 3 2 1 26 26 H 1.48503 * 109.99408 * 61.32272 * 3 2 1 27 27 H 1.07998 * 119.55284 * 0.04530 * 5 4 2 28 28 H 0.97005 * 120.00298 * 180.02562 * 8 7 6 29 29 H 1.08999 * 113.61878 * 203.66662 * 11 9 8 30 30 H 1.09001 * 113.61392 * 334.57435 * 11 9 8 31 31 H 1.07995 * 126.12392 * 359.97438 * 15 14 12 32 32 H 1.08003 * 126.03885 * 180.16565 * 16 15 14 33 33 H 1.08000 * 125.89893 * 179.75729 * 17 16 15 34 34 H 1.08995 * 113.61682 * 25.42937 * 19 9 8 35 35 H 1.09004 * 113.61432 * 156.25043 * 19 9 8 36 36 H 1.08002 * 120.75945 * 179.97438 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.6383 -0.0203 2.1936 6 7 3.0841 -0.6314 3.2754 7 6 2.8741 -1.9220 3.4802 8 7 3.3627 -2.5256 4.6347 9 6 4.1056 -1.7329 5.6177 10 1 4.5631 -0.8431 5.1852 11 6 3.3174 -1.4569 6.9089 12 6 3.8988 -2.7730 7.4519 13 1 3.2904 -3.6479 7.2229 14 7 4.2888 -2.7045 8.8624 15 6 4.4063 -1.5806 9.5999 16 6 4.7814 -1.9439 10.8483 17 6 4.9064 -3.3368 10.8719 18 7 4.6113 -3.7938 9.6820 19 6 5.0707 -2.5656 6.4779 20 6 2.1680 -2.6813 2.5496 21 9 1.9551 -3.9987 2.7602 22 6 1.6884 -2.0669 1.4054 23 1 -0.3933 0.4417 0.7651 24 1 1.7922 -0.5138 -0.8900 25 1 1.5615 2.4680 -1.2084 26 1 1.5879 2.4584 1.2243 27 1 2.8292 1.0343 2.0608 28 1 3.2115 -3.4713 4.7889 29 1 3.6587 -0.5734 7.4484 30 1 2.2361 -1.4801 6.7738 31 1 4.2302 -0.5721 9.2561 32 1 4.9575 -1.2760 11.6786 33 1 5.1961 -3.9323 11.7251 34 1 5.4048 -3.4838 5.9949 35 1 5.8922 -1.9855 6.8985 36 1 1.1380 -2.6294 0.6657 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494094_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:16 Heat of formation + Delta-G solvation = 88.291775 kcal Electronic energy + Delta-G solvation = -22351.840984 eV Core-core repulsion = 18755.512994 eV Total energy + Delta-G solvation = -3596.327990 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -49.95363 -42.33075 -41.52751 -40.15942 -38.12286 -35.69306 -33.33763 -32.46738 -31.03883 -30.85049 -27.15144 -26.85406 -26.07869 -24.76617 -23.11616 -22.21663 -21.93057 -20.32130 -19.66794 -18.83779 -18.38173 -18.13557 -17.65850 -17.05285 -16.81781 -16.30784 -16.03788 -16.00392 -15.57130 -15.48381 -15.21929 -14.92131 -14.42993 -14.42184 -14.10317 -14.01090 -13.68206 -13.52146 -13.44588 -13.00251 -12.74634 -12.33582 -12.08712 -11.92258 -11.49127 -11.42518 -10.85705 -10.73404 -10.62643 -10.31118 -9.48945 -8.93188 -5.06378 -0.16612 0.01854 0.97703 1.15628 1.47936 1.53769 1.73766 1.87395 1.98968 2.43556 2.92717 2.93903 3.14252 3.19126 3.27669 3.45071 3.47615 3.64280 3.75171 3.84772 3.87910 4.02237 4.26098 4.33660 4.35093 4.37732 4.46450 4.57847 4.62309 4.63152 4.73715 4.78177 4.89223 4.92723 5.14208 5.28627 5.75829 5.79864 6.01169 6.09681 6.29438 6.81698 6.82734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.063 4.063 3 Si 0.684 3.316 4 C -0.204 4.204 5 C 0.146 3.854 6 N -0.510 5.510 7 C 0.391 3.609 8 N -0.703 5.703 9 C 0.142 3.858 10 H 0.122 0.878 11 C -0.158 4.158 12 C 0.136 3.864 13 H 0.119 0.881 14 N -0.363 5.363 15 C 0.053 3.947 16 C -0.274 4.274 17 C 0.045 3.955 18 N -0.298 5.298 19 C -0.155 4.155 20 C -0.017 4.017 21 F -0.132 7.132 22 C -0.037 4.037 23 H 0.377 0.623 24 H 0.121 0.879 25 H -0.253 1.253 26 H -0.256 1.256 27 H 0.165 0.835 28 H 0.414 0.586 29 H 0.104 0.896 30 H 0.087 0.913 31 H 0.173 0.827 32 H 0.148 0.852 33 H 0.183 0.817 34 H 0.087 0.913 35 H 0.105 0.895 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.987 3.359 -0.706 3.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.173 4.173 3 Si 0.585 3.415 4 C -0.209 4.209 5 C -0.011 4.011 6 N -0.226 5.226 7 C 0.153 3.847 8 N -0.335 5.335 9 C 0.035 3.965 10 H 0.140 0.860 11 C -0.198 4.198 12 C 0.034 3.966 13 H 0.137 0.863 14 N -0.145 5.145 15 C -0.093 4.093 16 C -0.303 4.303 17 C -0.142 4.142 18 N -0.119 5.119 19 C -0.194 4.194 20 C -0.043 4.043 21 F -0.111 7.111 22 C -0.064 4.064 23 H 0.224 0.776 24 H 0.138 0.862 25 H -0.178 1.178 26 H -0.181 1.181 27 H 0.181 0.819 28 H 0.252 0.748 29 H 0.122 0.878 30 H 0.105 0.895 31 H 0.190 0.810 32 H 0.166 0.834 33 H 0.200 0.800 34 H 0.105 0.895 35 H 0.124 0.876 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.256 3.360 -1.373 4.274 hybrid contribution -1.597 -0.638 0.670 1.845 sum 0.659 2.722 -0.703 2.888 Atomic orbital electron populations 1.86625 1.17639 1.79935 1.49351 1.24847 0.83949 1.10886 0.97645 0.95069 0.91490 0.74192 0.80751 1.20892 1.05450 0.94508 1.00031 1.22418 0.91616 0.99607 0.87481 1.67295 1.24851 1.07138 1.23310 1.18364 0.90546 0.89048 0.86693 1.44220 1.59150 1.11726 1.18450 1.21580 0.91894 0.95785 0.87222 0.86028 1.23985 1.02273 0.96715 0.96801 1.22995 0.97574 1.00640 0.75400 0.86322 1.48708 1.52270 1.04091 1.09466 1.22486 1.01465 0.93033 0.92342 1.21568 1.14847 0.95762 0.98114 1.23954 0.99612 0.94831 0.95756 1.77389 1.21598 1.10229 1.02678 1.23908 0.97522 1.01983 0.95967 1.17992 1.08370 0.79559 0.98351 1.91506 1.93633 1.31100 1.94894 1.21316 0.95487 0.94456 0.95097 0.77573 0.86155 1.17803 1.18072 0.81861 0.74845 0.87763 0.89460 0.81038 0.83416 0.79984 0.89477 0.87639 0.83187 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.08 12.84 -35.23 -0.45 -0.37 16 2 C -0.06 0.12 2.82 36.00 0.10 0.22 16 3 Si 0.68 -1.77 29.91 -169.99 -5.08 -6.85 16 4 C -0.20 0.25 5.36 -104.47 -0.56 -0.31 16 5 C 0.15 -0.16 9.83 -17.57 -0.17 -0.34 16 6 N -0.51 -0.13 9.13 -12.37 -0.11 -0.24 16 7 C 0.39 0.11 7.49 -154.86 -1.16 -1.05 16 8 N -0.70 0.93 5.41 -53.06 -0.29 0.65 16 9 C 0.14 -0.32 4.35 -67.12 -0.29 -0.62 16 10 H 0.12 -0.23 7.41 -51.93 -0.38 -0.61 16 11 C -0.16 0.39 7.23 -25.92 -0.19 0.20 16 12 C 0.14 -0.13 4.91 -67.11 -0.33 -0.46 16 13 H 0.12 -0.11 8.14 -51.93 -0.42 -0.53 16 14 N -0.36 -0.58 3.81 -54.07 -0.21 -0.79 16 15 C 0.05 0.02 10.69 -17.22 -0.18 -0.17 16 16 C -0.27 -0.29 10.80 -40.01 -0.43 -0.72 16 17 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 18 N -0.30 -1.20 12.58 30.62 0.39 -0.82 16 19 C -0.15 0.32 7.63 -25.92 -0.20 0.13 16 20 C -0.02 -0.01 7.35 -39.10 -0.29 -0.30 16 21 F -0.13 -0.19 16.65 2.25 0.04 -0.15 16 22 C -0.04 0.01 9.82 -39.26 -0.39 -0.38 16 23 H 0.38 -1.10 8.70 45.56 0.40 -0.70 16 24 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 25 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 26 H -0.26 0.24 7.01 56.52 0.40 0.63 16 27 H 0.16 -0.52 4.84 -52.49 -0.25 -0.77 16 28 H 0.41 -0.86 8.17 -40.82 -0.33 -1.20 16 29 H 0.10 -0.37 6.31 -51.93 -0.33 -0.70 16 30 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.17 -0.49 6.69 -52.49 -0.35 -0.84 16 32 H 0.15 -0.13 8.06 -52.48 -0.42 -0.56 16 33 H 0.18 -0.09 8.06 -52.49 -0.42 -0.52 16 34 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.15 -0.16 8.06 -52.49 -0.42 -0.58 16 LS Contribution 311.58 15.07 4.70 4.70 Total: 0.00 -7.35 311.58 -9.15 -16.50 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -3.83 Total: -8.73 kcal Atomic # 6 Polarization: 0.40 SS G_CDS: -4.30 Total: -3.89 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.22 Total: -1.20 kcal Atomic # 8 Polarization: 0.08 SS G_CDS: -0.45 Total: -0.37 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 0.04 Total: -0.15 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.08 Total: -6.85 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -7.35 -9.15 -16.50 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494094_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.793 kcal (2) G-P(sol) polarization free energy of solvation -7.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 97.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.151 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.501 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds