Wall clock time and date at job start Mon Mar 8 2021 06:23:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47081 * 2 1 4 4 C 1.50705 * 109.46948 * 240.00601 * 2 1 3 5 5 C 1.38603 * 120.72186 * 299.99568 * 4 2 1 6 6 N 1.32265 * 119.20086 * 179.97438 * 5 4 2 7 7 C 1.32494 * 120.73963 * 0.02562 * 6 5 4 8 8 N 1.38412 * 119.21686 * 179.97438 * 7 6 5 9 9 C 1.46503 * 119.99814 * 180.02562 * 8 7 6 10 10 H 1.09001 * 112.85028 * 336.19570 * 9 8 7 11 11 C 1.53779 * 113.61483 * 107.50387 * 9 8 7 12 12 C 1.53784 * 87.08045 * 139.98067 * 11 9 8 13 13 H 1.09004 * 113.61451 * 220.02152 * 12 11 9 14 14 N 1.46496 * 113.61524 * 89.11591 * 12 11 9 15 15 C 1.34431 * 126.82224 * 347.50446 * 14 12 11 16 16 N 1.30836 * 108.07390 * 179.97438 * 15 14 12 17 17 C 1.33233 * 109.83109 * 0.02562 * 16 15 14 18 18 N 1.30715 * 108.94756 * 359.75355 * 17 16 15 19 19 C 1.53779 * 113.61085 * 205.00307 * 9 8 7 20 20 N 1.32498 * 121.56659 * 0.27713 * 7 6 5 21 21 C 1.32281 * 120.73617 * 359.43552 * 20 7 6 22 22 H 0.96709 * 113.99999 * 299.99568 * 1 2 3 23 23 H 1.08990 * 109.47936 * 120.00154 * 2 1 3 24 24 H 1.48501 * 110.00202 * 300.00688 * 3 2 1 25 25 H 1.48504 * 109.99797 * 61.32263 * 3 2 1 26 26 H 1.08005 * 120.39625 * 0.02562 * 5 4 2 27 27 H 0.96998 * 120.00139 * 0.02562 * 8 7 6 28 28 H 1.09002 * 113.61557 * 25.43179 * 11 9 8 29 29 H 1.09004 * 113.61501 * 254.52599 * 11 9 8 30 30 H 1.07998 * 125.95959 * 359.92493 * 15 14 12 31 31 H 1.08008 * 125.52572 * 179.97438 * 17 16 15 32 32 H 1.08997 * 113.61646 * 105.47219 * 19 9 8 33 33 H 1.08998 * 113.69354 * 334.57527 * 19 9 8 34 34 H 1.07997 * 120.39853 * 180.29937 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.6056 -2.0370 -1.4649 6 7 2.0625 -2.6308 -2.5549 7 6 2.8231 -1.9719 -3.4168 8 7 3.2844 -2.6243 -4.5470 9 6 4.1270 -1.9124 -5.5110 10 1 3.9910 -0.8315 -5.4749 11 6 5.6007 -2.3510 -5.4830 12 6 5.5784 -2.2492 -7.0173 13 1 6.1232 -3.0508 -7.5161 14 7 5.9308 -0.9200 -7.5225 15 6 6.0275 0.2141 -6.8072 16 7 6.3641 1.1806 -7.6224 17 6 6.4902 0.7045 -8.8603 18 7 6.2396 -0.5784 -8.8492 19 6 4.0625 -2.4942 -6.9331 20 7 3.1575 -0.7051 -3.2195 21 6 2.7292 -0.0511 -2.1524 22 1 -0.3934 0.4417 0.7652 23 1 1.7924 -0.5138 0.8898 24 1 1.5613 2.4680 -1.2084 25 1 1.5879 2.4585 1.2243 26 1 0.9857 -2.5792 -0.7661 27 1 3.0498 -3.5529 -4.7007 28 1 5.7471 -3.3665 -5.1149 29 1 6.2626 -1.6275 -5.0070 30 1 5.8564 0.3107 -5.7453 31 1 6.7596 1.2838 -9.7312 32 1 3.4828 -1.8864 -7.6277 33 1 3.7883 -3.5488 -6.9628 34 1 3.0012 0.9828 -1.9995 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494096_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:18 Heat of formation + Delta-G solvation = 165.427742 kcal Electronic energy + Delta-G solvation = -20528.028295 eV Core-core repulsion = 17273.647324 eV Total energy + Delta-G solvation = -3254.380970 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.112 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -43.19265 -42.12041 -40.43176 -38.15722 -36.03877 -34.73556 -33.28267 -32.23114 -31.72177 -27.32144 -27.25692 -26.11212 -25.56603 -23.43528 -23.01748 -22.55880 -21.04013 -19.44504 -19.00232 -18.53235 -17.99282 -17.17324 -16.74485 -16.49137 -16.14453 -16.11850 -15.83677 -15.54056 -15.31873 -14.80581 -14.60954 -14.17497 -14.00710 -13.86666 -13.50384 -13.30230 -12.97693 -12.61887 -12.29249 -11.90805 -11.84881 -11.76416 -11.38860 -10.93710 -10.74894 -10.73589 -10.62016 -10.06781 -9.19884 -5.08564 0.01905 0.12584 0.64742 1.16079 1.19414 1.48859 1.68840 1.86178 2.06008 2.69335 2.82733 3.06560 3.08565 3.23315 3.37013 3.41591 3.57793 3.61081 3.69909 3.79842 3.82846 4.06216 4.10105 4.18259 4.27066 4.39975 4.45542 4.48822 4.59732 4.68057 4.79233 5.16709 5.30995 5.48899 5.68015 5.83014 5.91635 6.27550 6.36259 7.14961 7.22355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.055 4.055 3 Si 0.674 3.326 4 C -0.243 4.243 5 C 0.225 3.775 6 N -0.567 5.567 7 C 0.566 3.434 8 N -0.684 5.684 9 C 0.138 3.862 10 H 0.123 0.877 11 C -0.156 4.156 12 C 0.134 3.866 13 H 0.122 0.878 14 N -0.366 5.366 15 C 0.256 3.744 16 N -0.543 5.543 17 C 0.200 3.800 18 N -0.316 5.316 19 C -0.154 4.154 20 N -0.562 5.562 21 C 0.202 3.798 22 H 0.382 0.618 23 H 0.079 0.921 24 H -0.252 1.252 25 H -0.256 1.256 26 H 0.170 0.830 27 H 0.417 0.583 28 H 0.114 0.886 29 H 0.088 0.912 30 H 0.218 0.782 31 H 0.219 0.781 32 H 0.086 0.914 33 H 0.111 0.889 34 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.285 -1.768 4.183 4.720 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.166 4.166 3 Si 0.575 3.425 4 C -0.251 4.251 5 C 0.057 3.943 6 N -0.289 5.289 7 C 0.209 3.791 8 N -0.320 5.320 9 C 0.031 3.969 10 H 0.141 0.859 11 C -0.197 4.197 12 C 0.030 3.970 13 H 0.140 0.860 14 N -0.157 5.157 15 C -0.041 4.041 16 N -0.269 5.269 17 C -0.103 4.103 18 N -0.143 5.143 19 C -0.193 4.193 20 N -0.284 5.284 21 C 0.035 3.965 22 H 0.231 0.769 23 H 0.097 0.903 24 H -0.176 1.176 25 H -0.181 1.181 26 H 0.187 0.813 27 H 0.255 0.745 28 H 0.132 0.868 29 H 0.107 0.893 30 H 0.235 0.765 31 H 0.235 0.765 32 H 0.105 0.895 33 H 0.129 0.871 34 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 1.679 -1.811 2.129 3.261 hybrid contribution -1.644 -0.161 1.460 2.205 sum 0.035 -1.972 3.589 4.095 Atomic orbital electron populations 1.86580 1.17821 1.80131 1.50003 1.24407 0.84365 1.10543 0.97245 0.95343 0.91485 0.74684 0.81037 1.20647 1.06560 0.97410 1.00438 1.22814 0.89946 0.90735 0.90855 1.67975 1.15915 1.39417 1.05545 1.19397 0.86895 0.85692 0.87087 1.44047 1.53947 1.14418 1.19629 1.22681 0.88698 0.98709 0.86804 0.85925 1.24029 0.98099 1.04973 0.92555 1.21942 0.97293 0.81929 0.95867 0.86001 1.50241 1.50946 1.08581 1.05920 1.26099 0.96138 0.81584 1.00278 1.70618 1.23354 1.31496 1.01470 1.26116 0.98051 0.89769 0.96375 1.78104 1.23550 1.16423 0.96220 1.23856 0.95076 1.03704 0.96668 1.67884 1.28698 1.08421 1.23420 1.22736 0.88799 0.98723 0.86288 0.76941 0.90279 1.17614 1.18095 0.81278 0.74468 0.86757 0.89342 0.76549 0.76472 0.89486 0.87114 0.81484 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.20 12.76 -35.23 -0.45 -0.25 16 2 C -0.05 0.09 2.84 36.01 0.10 0.20 16 3 Si 0.67 -1.55 29.87 -169.99 -5.08 -6.63 16 4 C -0.24 -0.02 5.43 -104.35 -0.57 -0.59 16 5 C 0.22 0.20 10.92 -17.23 -0.19 0.02 16 6 N -0.57 -1.22 10.46 -13.93 -0.15 -1.37 16 7 C 0.57 0.85 8.43 -322.79 -2.72 -1.87 16 8 N -0.68 0.80 5.50 -55.00 -0.30 0.50 16 9 C 0.14 -0.33 3.84 -67.12 -0.26 -0.59 16 10 H 0.12 -0.13 6.26 -51.93 -0.32 -0.46 16 11 C -0.16 0.59 7.14 -25.92 -0.18 0.40 16 12 C 0.13 -0.31 5.21 -67.12 -0.35 -0.66 16 13 H 0.12 -0.35 8.14 -51.93 -0.42 -0.77 16 14 N -0.37 -0.26 3.81 -55.32 -0.21 -0.47 16 15 C 0.26 0.17 10.82 -90.65 -0.98 -0.81 16 16 N -0.54 -1.72 11.19 -15.83 -0.18 -1.89 16 17 C 0.20 0.48 13.03 -91.82 -1.20 -0.71 16 18 N -0.32 -1.00 12.70 29.29 0.37 -0.62 16 19 C -0.15 0.45 7.63 -25.92 -0.20 0.25 16 20 N -0.56 -0.73 9.13 -13.93 -0.13 -0.86 16 21 C 0.20 0.02 9.92 -17.22 -0.17 -0.15 16 22 H 0.38 -1.62 8.74 45.56 0.40 -1.22 16 23 H 0.08 -0.29 7.96 -51.93 -0.41 -0.70 16 24 H -0.25 -0.25 7.11 56.52 0.40 0.16 16 25 H -0.26 0.04 7.11 56.52 0.40 0.44 16 26 H 0.17 -0.16 8.06 -52.48 -0.42 -0.59 16 27 H 0.42 -1.02 8.84 -40.82 -0.36 -1.38 16 28 H 0.11 -0.54 8.14 -51.93 -0.42 -0.97 16 29 H 0.09 -0.33 7.03 -51.93 -0.37 -0.69 16 30 H 0.22 -0.56 6.75 -52.49 -0.35 -0.91 16 31 H 0.22 -0.19 8.06 -52.48 -0.42 -0.61 16 32 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 33 H 0.11 -0.52 8.12 -51.93 -0.42 -0.94 16 34 H 0.17 -0.39 5.04 -52.49 -0.26 -0.65 16 LS Contribution 294.14 15.07 4.43 4.43 Total: 0.00 -9.67 294.14 -11.81 -21.49 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -3.42 Total: -9.81 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -6.71 Total: -4.51 kcal Atomic # 7 Polarization: -4.13 SS G_CDS: -0.59 Total: -4.72 kcal Atomic # 8 Polarization: 0.20 SS G_CDS: -0.45 Total: -0.25 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.08 Total: -6.63 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -9.67 -11.81 -21.49 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494096_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 186.913 kcal (2) G-P(sol) polarization free energy of solvation -9.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 177.243 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.485 kcal (6) G-S(sol) free energy of system = (1) + (5) 165.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds