Wall clock time and date at job start Mon Mar 8 2021 06:23:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86302 * 109.47081 * 2 1 4 4 C 1.50705 * 109.46948 * 240.00601 * 2 1 3 5 5 C 1.38603 * 120.72186 * 299.99568 * 4 2 1 6 6 N 1.32265 * 119.20086 * 179.97438 * 5 4 2 7 7 C 1.32494 * 120.73963 * 0.02562 * 6 5 4 8 8 N 1.38412 * 119.21686 * 179.97438 * 7 6 5 9 9 C 1.46503 * 119.99814 * 180.02562 * 8 7 6 10 10 H 1.09001 * 112.85028 * 336.19570 * 9 8 7 11 11 C 1.53779 * 113.61483 * 107.50387 * 9 8 7 12 12 C 1.53784 * 87.08045 * 139.98067 * 11 9 8 13 13 H 1.09004 * 113.61451 * 220.02152 * 12 11 9 14 14 N 1.46496 * 113.61524 * 89.11591 * 12 11 9 15 15 C 1.34431 * 126.82224 * 347.50446 * 14 12 11 16 16 N 1.30836 * 108.07390 * 179.97438 * 15 14 12 17 17 C 1.33233 * 109.83109 * 0.02562 * 16 15 14 18 18 N 1.30715 * 108.94756 * 359.75355 * 17 16 15 19 19 C 1.53779 * 113.61085 * 205.00307 * 9 8 7 20 20 N 1.32498 * 121.56659 * 0.27713 * 7 6 5 21 21 C 1.32281 * 120.73617 * 359.43552 * 20 7 6 22 22 H 0.96709 * 113.99999 * 299.99568 * 1 2 3 23 23 H 1.08990 * 109.47936 * 120.00154 * 2 1 3 24 24 H 1.48501 * 110.00202 * 300.00688 * 3 2 1 25 25 H 1.48504 * 109.99797 * 61.32263 * 3 2 1 26 26 H 1.08005 * 120.39625 * 0.02562 * 5 4 2 27 27 H 0.96998 * 120.00139 * 0.02562 * 8 7 6 28 28 H 1.09002 * 113.61557 * 25.43179 * 11 9 8 29 29 H 1.09004 * 113.61501 * 254.52599 * 11 9 8 30 30 H 1.07998 * 125.95959 * 359.92493 * 15 14 12 31 31 H 1.08008 * 125.52572 * 179.97438 * 17 16 15 32 32 H 1.08997 * 113.61646 * 105.47219 * 19 9 8 33 33 H 1.08998 * 113.69354 * 334.57527 * 19 9 8 34 34 H 1.07997 * 120.39853 * 180.29937 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 1.6056 -2.0370 -1.4649 6 7 2.0625 -2.6308 -2.5549 7 6 2.8231 -1.9719 -3.4168 8 7 3.2844 -2.6243 -4.5470 9 6 4.1270 -1.9124 -5.5110 10 1 3.9910 -0.8315 -5.4749 11 6 5.6007 -2.3510 -5.4830 12 6 5.5784 -2.2492 -7.0173 13 1 6.1232 -3.0508 -7.5161 14 7 5.9308 -0.9200 -7.5225 15 6 6.0275 0.2141 -6.8072 16 7 6.3641 1.1806 -7.6224 17 6 6.4902 0.7045 -8.8603 18 7 6.2396 -0.5784 -8.8492 19 6 4.0625 -2.4942 -6.9331 20 7 3.1575 -0.7051 -3.2195 21 6 2.7292 -0.0511 -2.1524 22 1 -0.3934 0.4417 0.7652 23 1 1.7924 -0.5138 0.8898 24 1 1.5613 2.4680 -1.2084 25 1 1.5879 2.4585 1.2243 26 1 0.9857 -2.5792 -0.7661 27 1 3.0498 -3.5529 -4.7007 28 1 5.7471 -3.3665 -5.1149 29 1 6.2626 -1.6275 -5.0070 30 1 5.8564 0.3107 -5.7453 31 1 6.7596 1.2838 -9.7312 32 1 3.4828 -1.8864 -7.6277 33 1 3.7883 -3.5488 -6.9628 34 1 3.0012 0.9828 -1.9995 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15494096_12175864.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:18 Heat of formation + Delta-G solvation = 166.331842 kcal Electronic energy + Delta-G solvation = -20527.989090 eV Core-core repulsion = 17273.647324 eV Total energy + Delta-G solvation = -3254.341765 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 275.112 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -43.22847 -42.09821 -40.29992 -38.05600 -35.96506 -34.74214 -33.29034 -32.28475 -31.70948 -27.24109 -27.02488 -26.04865 -25.52967 -23.41542 -23.02376 -22.56196 -20.94926 -19.38833 -18.94206 -18.42258 -17.89557 -17.08315 -16.66651 -16.47639 -16.13728 -16.07448 -15.81993 -15.46081 -15.27119 -14.75837 -14.56918 -14.05984 -13.93401 -13.62999 -13.39010 -13.19953 -12.99175 -12.51169 -12.29129 -11.89388 -11.73491 -11.70086 -11.29219 -11.05269 -10.86089 -10.64798 -10.61349 -10.05384 -9.12307 -4.92004 0.03643 0.12362 0.59607 1.25810 1.31544 1.61450 1.78574 1.95622 1.98063 2.72844 3.00770 3.13608 3.26838 3.39073 3.44184 3.56899 3.65712 3.70555 3.86576 3.89102 3.90365 4.15082 4.18646 4.33697 4.56958 4.57618 4.61662 4.69692 4.75441 4.80783 4.95250 5.23548 5.29867 5.42283 5.72919 5.86960 6.00409 6.37097 6.63227 7.07025 7.24541 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.059 4.059 3 Si 0.753 3.247 4 C -0.247 4.247 5 C 0.212 3.788 6 N -0.588 5.588 7 C 0.551 3.449 8 N -0.677 5.677 9 C 0.136 3.864 10 H 0.109 0.891 11 C -0.139 4.139 12 C 0.127 3.873 13 H 0.130 0.870 14 N -0.365 5.365 15 C 0.258 3.742 16 N -0.576 5.576 17 C 0.191 3.809 18 N -0.347 5.347 19 C -0.144 4.144 20 N -0.573 5.573 21 C 0.193 3.807 22 H 0.397 0.603 23 H 0.104 0.896 24 H -0.299 1.299 25 H -0.283 1.283 26 H 0.183 0.817 27 H 0.422 0.578 28 H 0.131 0.869 29 H 0.091 0.909 30 H 0.244 0.756 31 H 0.239 0.761 32 H 0.067 0.933 33 H 0.132 0.868 34 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.606 -2.428 5.103 5.875 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.169 4.169 3 Si 0.659 3.341 4 C -0.255 4.255 5 C 0.045 3.955 6 N -0.310 5.310 7 C 0.194 3.806 8 N -0.314 5.314 9 C 0.030 3.970 10 H 0.127 0.873 11 C -0.179 4.179 12 C 0.023 3.977 13 H 0.148 0.852 14 N -0.155 5.155 15 C -0.038 4.038 16 N -0.304 5.304 17 C -0.112 4.112 18 N -0.174 5.174 19 C -0.184 4.184 20 N -0.296 5.296 21 C 0.026 3.974 22 H 0.248 0.752 23 H 0.122 0.878 24 H -0.227 1.227 25 H -0.210 1.210 26 H 0.200 0.800 27 H 0.262 0.738 28 H 0.149 0.851 29 H 0.110 0.890 30 H 0.260 0.740 31 H 0.255 0.745 32 H 0.086 0.914 33 H 0.150 0.850 34 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 2.005 -2.508 3.064 4.438 hybrid contribution -1.812 0.063 1.189 2.168 sum 0.193 -2.445 4.253 4.909 Atomic orbital electron populations 1.86536 1.18554 1.80612 1.51317 1.24566 0.83906 1.10982 0.97432 0.94459 0.90230 0.72550 0.76901 1.20833 1.06370 0.97272 1.01005 1.23126 0.90109 0.91343 0.90921 1.67991 1.16671 1.40049 1.06245 1.19685 0.87186 0.86019 0.87729 1.44101 1.53649 1.14609 1.18992 1.22673 0.89531 0.98002 0.86800 0.87299 1.23973 0.96782 1.05958 0.91220 1.22187 0.97726 0.80854 0.96903 0.85201 1.50396 1.50373 1.09568 1.05208 1.26569 0.94916 0.81220 1.01085 1.70603 1.24779 1.32860 1.02129 1.26582 0.97732 0.89862 0.96982 1.78019 1.24645 1.16938 0.97843 1.23840 0.94293 1.04568 0.95660 1.67925 1.29209 1.08495 1.23939 1.23110 0.88714 0.99477 0.86085 0.75168 0.87804 1.22667 1.20965 0.80039 0.73817 0.85084 0.89007 0.74011 0.74546 0.91417 0.85003 0.79786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.67 12.76 -148.98 -1.90 -1.24 16 2 C -0.06 0.25 2.84 71.24 0.20 0.45 16 3 Si 0.75 -3.63 29.87 68.60 2.05 -1.58 16 4 C -0.25 0.01 5.43 -19.69 -0.11 -0.10 16 5 C 0.21 0.40 10.92 84.71 0.93 1.32 16 6 N -0.59 -2.68 10.46 -197.98 -2.07 -4.75 16 7 C 0.55 1.76 8.43 261.48 2.20 3.96 16 8 N -0.68 1.71 5.50 -327.92 -1.80 -0.10 16 9 C 0.14 -0.69 3.84 45.52 0.17 -0.51 16 10 H 0.11 -0.20 6.26 -2.39 -0.01 -0.22 16 11 C -0.14 1.19 7.14 31.12 0.22 1.41 16 12 C 0.13 -0.64 5.21 45.52 0.24 -0.41 16 13 H 0.13 -0.84 8.14 -2.39 -0.02 -0.86 16 14 N -0.37 -0.63 3.81 -328.92 -1.25 -1.88 16 15 C 0.26 0.43 10.82 180.36 1.95 2.39 16 16 N -0.58 -4.09 11.19 -204.00 -2.28 -6.37 16 17 C 0.19 1.10 13.03 180.77 2.36 3.46 16 18 N -0.35 -2.47 12.70 -61.24 -0.78 -3.24 16 19 C -0.14 0.89 7.63 31.12 0.24 1.12 16 20 N -0.57 -1.62 9.13 -197.98 -1.81 -3.43 16 21 C 0.19 0.06 9.92 84.71 0.84 0.90 16 22 H 0.40 -3.57 8.74 -74.05 -0.65 -4.22 16 23 H 0.10 -0.93 7.96 -2.39 -0.02 -0.95 16 24 H -0.30 -0.91 7.11 99.48 0.71 -0.21 16 25 H -0.28 0.11 7.11 99.48 0.71 0.82 16 26 H 0.18 -0.37 8.06 -2.91 -0.02 -0.39 16 27 H 0.42 -2.24 8.84 -92.71 -0.82 -3.06 16 28 H 0.13 -1.49 8.14 -2.39 -0.02 -1.51 16 29 H 0.09 -0.79 7.03 -2.39 -0.02 -0.80 16 30 H 0.24 -1.29 6.75 -2.91 -0.02 -1.31 16 31 H 0.24 -0.19 8.06 -2.91 -0.02 -0.21 16 32 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 33 H 0.13 -1.38 8.12 -2.39 -0.02 -1.40 16 34 H 0.19 -0.86 5.04 -2.91 -0.01 -0.87 16 Total: 0.00 -23.06 294.14 -0.87 -23.93 By element: Atomic # 1 Polarization: -15.06 SS G_CDS: -0.26 Total: -15.32 kcal Atomic # 6 Polarization: 4.74 SS G_CDS: 9.24 Total: 13.99 kcal Atomic # 7 Polarization: -9.78 SS G_CDS: -10.00 Total: -19.78 kcal Atomic # 8 Polarization: 0.67 SS G_CDS: -1.90 Total: -1.24 kcal Atomic # 14 Polarization: -3.63 SS G_CDS: 2.05 Total: -1.58 kcal Total: -23.06 -0.87 -23.93 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494096_12175864.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 190.257 kcal (2) G-P(sol) polarization free energy of solvation -23.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 167.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.925 kcal (6) G-S(sol) free energy of system = (1) + (5) 166.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds