Wall clock time and date at job start Mon Mar 8 2021 06:23:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86297 * 109.46961 * 2 1 4 4 C 1.50701 * 109.46834 * 240.00225 * 2 1 3 5 5 C 1.38839 * 120.33281 * 299.99806 * 4 2 1 6 6 C 1.38350 * 118.50250 * 180.02562 * 5 4 2 7 7 C 1.39095 * 119.09673 * 0.25529 * 6 5 4 8 8 N 1.39007 * 119.70180 * 179.74354 * 7 6 5 9 9 C 1.46500 * 120.00087 * 0.02562 * 8 7 6 10 10 H 1.08995 * 112.85144 * 23.79692 * 9 8 7 11 11 C 1.53776 * 113.61616 * 154.99980 * 9 8 7 12 12 C 1.53779 * 87.08390 * 139.97875 * 11 9 8 13 13 H 1.09006 * 113.61563 * 220.01804 * 12 11 9 14 14 N 1.46496 * 113.61296 * 89.11741 * 12 11 9 15 15 C 1.34430 * 126.82041 * 274.71030 * 14 12 11 16 16 N 1.30835 * 108.07871 * 179.89450 * 15 14 12 17 17 C 1.33250 * 109.82515 * 0.38087 * 16 15 14 18 18 N 1.30710 * 108.94758 * 359.76534 * 17 16 15 19 19 C 1.53780 * 113.61170 * 252.49566 * 9 8 7 20 20 N 1.32423 * 120.58937 * 359.45560 * 7 6 5 21 21 C 1.31936 * 121.62344 * 0.58051 * 20 7 6 22 22 H 0.96703 * 113.99835 * 59.99722 * 1 2 3 23 23 H 1.08993 * 109.47042 * 120.00377 * 2 1 3 24 24 H 1.48498 * 110.00349 * 298.67897 * 3 2 1 25 25 H 1.48501 * 110.00276 * 60.00228 * 3 2 1 26 26 H 1.07998 * 120.75060 * 0.04610 * 5 4 2 27 27 H 1.08002 * 120.44720 * 179.97438 * 6 5 4 28 28 H 0.96994 * 119.99911 * 180.02562 * 8 7 6 29 29 H 1.09002 * 113.61409 * 254.52946 * 11 9 8 30 30 H 1.09004 * 113.61669 * 25.43158 * 11 9 8 31 31 H 1.07998 * 125.96616 * 0.03671 * 15 14 12 32 32 H 1.07997 * 125.52700 * 179.79931 * 17 16 15 33 33 H 1.08999 * 113.61841 * 334.56378 * 19 9 8 34 34 H 1.08997 * 113.61729 * 105.47370 * 19 9 8 35 35 H 1.08006 * 119.57233 * 179.71038 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6002 -2.0395 -1.4571 6 6 2.0823 -2.6547 -2.5987 7 6 2.8823 -1.9264 -3.4730 8 7 3.3780 -2.5336 -4.6210 9 6 3.0566 -3.9343 -4.9059 10 1 2.1392 -4.2655 -4.4193 11 6 3.1244 -4.2902 -6.4004 12 6 3.7697 -5.6193 -5.9740 13 1 4.5845 -5.9376 -6.6244 14 7 2.7995 -6.6853 -5.7122 15 6 2.1446 -6.9136 -4.5607 16 7 1.3698 -7.9536 -4.7335 17 6 1.5084 -8.4191 -5.9743 18 7 2.3734 -7.6755 -6.6125 19 6 4.2430 -4.8917 -4.7046 20 7 3.1714 -0.6583 -3.2243 21 6 2.7260 -0.0463 -2.1436 22 1 -0.3933 0.4418 -0.7651 23 1 1.7924 -0.5139 0.8899 24 1 1.5880 2.4586 -1.2242 25 1 1.5616 2.4679 1.2085 26 1 0.9799 -2.5809 -0.7582 27 1 1.8444 -3.6876 -2.8058 28 1 3.9366 -2.0300 -5.2334 29 1 2.1459 -4.4093 -6.8657 30 1 3.7909 -3.6452 -6.9731 31 1 2.2395 -6.3376 -3.6521 32 1 0.9897 -9.2722 -6.3861 33 1 5.2153 -4.4112 -4.8137 34 1 4.1677 -5.4965 -3.8010 35 1 2.9860 0.9877 -1.9712 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494096_13915762.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:20 Heat of formation + Delta-G solvation = 147.794000 kcal Electronic energy + Delta-G solvation = -20394.692397 eV Core-core repulsion = 17204.972681 eV Total energy + Delta-G solvation = -3189.719716 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -43.30759 -41.60286 -40.42279 -38.06989 -35.88234 -33.57035 -33.04135 -32.16604 -31.15386 -27.37497 -27.19992 -25.78768 -24.93113 -23.48009 -22.93701 -22.36195 -21.05957 -19.00705 -18.65675 -18.20888 -17.89443 -16.89506 -16.60780 -16.39875 -16.29550 -16.15080 -15.94722 -15.39747 -15.19550 -14.79415 -14.39279 -14.13712 -14.06184 -13.95476 -13.63811 -13.21821 -13.08264 -12.64801 -12.46399 -12.06041 -11.93928 -11.32264 -11.04391 -10.85283 -10.84724 -10.72473 -10.58057 -10.45572 -8.86522 -4.99011 0.14005 0.33140 0.53476 1.08438 1.26595 1.56857 1.86444 1.95072 1.95753 2.68040 2.74225 2.98890 3.20071 3.25682 3.34810 3.40297 3.54666 3.69554 3.72522 3.81394 3.93929 3.99088 4.08099 4.18925 4.20554 4.34366 4.37471 4.50002 4.50822 4.60584 4.65369 4.91953 5.19085 5.21787 5.37577 5.39960 5.70935 5.83329 6.35611 6.38286 7.03896 7.04217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.060 4.060 3 Si 0.678 3.322 4 C -0.231 4.231 5 C -0.004 4.004 6 C -0.240 4.240 7 C 0.406 3.594 8 N -0.710 5.710 9 C 0.129 3.871 10 H 0.112 0.888 11 C -0.150 4.150 12 C 0.132 3.868 13 H 0.123 0.877 14 N -0.365 5.365 15 C 0.251 3.749 16 N -0.541 5.541 17 C 0.201 3.799 18 N -0.313 5.313 19 C -0.158 4.158 20 N -0.537 5.537 21 C 0.157 3.843 22 H 0.375 0.625 23 H 0.117 0.883 24 H -0.258 1.258 25 H -0.255 1.255 26 H 0.137 0.863 27 H 0.131 0.869 28 H 0.409 0.591 29 H 0.087 0.913 30 H 0.112 0.888 31 H 0.215 0.785 32 H 0.220 0.780 33 H 0.117 0.883 34 H 0.087 0.913 35 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.521 0.889 -0.155 3.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.170 4.170 3 Si 0.579 3.421 4 C -0.236 4.236 5 C -0.030 4.030 6 C -0.264 4.264 7 C 0.171 3.829 8 N -0.342 5.342 9 C 0.022 3.978 10 H 0.129 0.871 11 C -0.189 4.189 12 C 0.028 3.972 13 H 0.141 0.859 14 N -0.156 5.156 15 C -0.046 4.046 16 N -0.267 5.267 17 C -0.102 4.102 18 N -0.140 5.140 19 C -0.198 4.198 20 N -0.254 5.254 21 C 0.000 4.000 22 H 0.223 0.777 23 H 0.135 0.865 24 H -0.183 1.183 25 H -0.180 1.180 26 H 0.155 0.845 27 H 0.149 0.851 28 H 0.246 0.754 29 H 0.106 0.894 30 H 0.130 0.870 31 H 0.231 0.769 32 H 0.236 0.764 33 H 0.136 0.864 34 H 0.105 0.895 35 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.893 1.481 -0.738 4.230 hybrid contribution -1.292 -0.332 -0.103 1.338 sum 2.601 1.149 -0.842 2.965 Atomic orbital electron populations 1.86600 1.17895 1.79900 1.49353 1.24766 0.83738 1.10574 0.97969 0.95194 0.91654 0.74687 0.80573 1.20967 1.05716 0.96509 1.00380 1.21218 0.93695 0.93213 0.94846 1.21444 1.05489 1.01807 0.97673 1.18402 0.89168 0.88501 0.86826 1.44389 1.55683 1.11037 1.23106 1.22667 0.98096 0.80690 0.96343 0.87072 1.23816 1.03516 0.95177 0.96432 1.21980 0.90597 0.84555 1.00058 0.85920 1.50257 1.32990 1.23026 1.09337 1.25988 0.90687 0.95406 0.92536 1.70621 1.24951 1.11928 1.19237 1.26137 0.95639 0.99769 0.88666 1.78125 1.18067 1.01977 1.15831 1.24071 1.01172 0.97460 0.97093 1.67154 1.27306 1.08870 1.22020 1.22247 0.91334 0.98739 0.87705 0.77692 0.86471 1.18303 1.17999 0.84468 0.85127 0.75420 0.89448 0.86961 0.76918 0.76374 0.86428 0.89458 0.82692 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.35 12.78 -35.23 -0.45 -0.80 16 2 C -0.06 0.05 2.84 36.01 0.10 0.15 16 3 Si 0.68 -0.96 29.82 -169.99 -5.07 -6.03 16 4 C -0.23 0.08 5.40 -104.46 -0.56 -0.48 16 5 C 0.00 0.00 9.77 -39.32 -0.38 -0.38 16 6 C -0.24 0.21 9.29 -39.22 -0.36 -0.16 16 7 C 0.41 0.01 7.65 -155.01 -1.19 -1.18 16 8 N -0.71 1.71 5.53 -53.15 -0.29 1.42 16 9 C 0.13 -0.52 3.62 -67.12 -0.24 -0.76 16 10 H 0.11 -0.44 5.01 -51.93 -0.26 -0.70 16 11 C -0.15 0.60 7.63 -25.92 -0.20 0.40 16 12 C 0.13 -0.44 5.21 -67.12 -0.35 -0.79 16 13 H 0.12 -0.44 8.14 -51.93 -0.42 -0.86 16 14 N -0.37 0.11 3.81 -55.32 -0.21 -0.10 16 15 C 0.25 -0.13 10.82 -90.65 -0.98 -1.12 16 16 N -0.54 -1.21 11.19 -15.83 -0.18 -1.39 16 17 C 0.20 0.33 13.03 -91.81 -1.20 -0.86 16 18 N -0.31 -0.74 12.70 29.29 0.37 -0.37 16 19 C -0.16 0.78 7.14 -25.92 -0.18 0.60 16 20 N -0.54 -0.76 10.39 -12.44 -0.13 -0.89 16 21 C 0.16 0.03 9.84 -17.57 -0.17 -0.14 16 22 H 0.38 -0.72 8.70 45.56 0.40 -0.32 16 23 H 0.12 -0.19 7.96 -51.93 -0.41 -0.61 16 24 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 25 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 26 H 0.14 -0.20 8.06 -52.49 -0.42 -0.62 16 27 H 0.13 -0.39 6.03 -52.49 -0.32 -0.70 16 28 H 0.41 -1.21 8.85 -40.82 -0.36 -1.57 16 29 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 30 H 0.11 -0.60 8.12 -51.93 -0.42 -1.02 16 31 H 0.21 -0.94 6.76 -52.49 -0.35 -1.30 16 32 H 0.22 -0.33 8.06 -52.49 -0.42 -0.75 16 33 H 0.12 -0.66 8.14 -51.93 -0.42 -1.08 16 34 H 0.09 -0.45 7.02 -51.93 -0.36 -0.82 16 35 H 0.16 -0.25 4.88 -52.48 -0.26 -0.51 16 LS Contribution 296.53 15.07 4.47 4.47 Total: 0.00 -8.89 296.53 -10.87 -19.76 By element: Atomic # 1 Polarization: -7.68 SS G_CDS: -3.66 Total: -11.34 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: -5.72 Total: -4.72 kcal Atomic # 7 Polarization: -0.90 SS G_CDS: -0.44 Total: -1.33 kcal Atomic # 8 Polarization: -0.35 SS G_CDS: -0.45 Total: -0.80 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.07 Total: -6.03 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -8.89 -10.87 -19.76 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494096_13915762.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 167.558 kcal (2) G-P(sol) polarization free energy of solvation -8.889 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 158.668 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.764 kcal (6) G-S(sol) free energy of system = (1) + (5) 147.794 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds