Wall clock time and date at job start Mon Mar 8 2021 06:23:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33320 * 125.94925 * 2 1 4 4 C 1.50705 * 122.71518 * 359.97438 * 3 2 1 5 5 O 1.42907 * 109.46426 * 329.99832 * 4 3 2 6 6 Si 1.86303 * 109.47243 * 210.00144 * 4 3 2 7 7 N 1.32127 * 114.57919 * 179.97438 * 3 2 1 8 8 C 1.29680 * 116.86558 * 359.97438 * 7 3 2 9 9 N 1.38608 * 124.95401 * 180.02562 * 8 7 3 10 10 C 1.46496 * 120.00645 * 179.97438 * 9 8 7 11 11 H 1.09003 * 112.84503 * 23.80646 * 10 9 8 12 12 C 1.53784 * 113.61730 * 154.99760 * 10 9 8 13 13 C 1.53779 * 87.08091 * 139.98514 * 12 10 9 14 14 H 1.09001 * 113.61264 * 220.02134 * 13 12 10 15 15 N 1.46503 * 113.61424 * 89.20394 * 13 12 10 16 16 C 1.34432 * 126.81967 * 275.00037 * 15 13 12 17 17 N 1.30833 * 108.07366 * 179.97438 * 16 15 13 18 18 C 1.33238 * 109.83073 * 0.02562 * 17 16 15 19 19 N 1.30721 * 108.94725 * 359.75105 * 18 17 16 20 20 C 1.53780 * 113.62046 * 252.50101 * 10 9 8 21 21 S 1.70972 * 110.10158 * 359.72329 * 8 7 3 22 22 H 1.09001 * 109.46953 * 90.00077 * 1 2 3 23 23 H 1.09000 * 109.47318 * 209.99674 * 1 2 3 24 24 H 1.09000 * 109.47161 * 330.00305 * 1 2 3 25 25 H 1.08990 * 109.47230 * 89.99619 * 4 3 2 26 26 H 0.96699 * 113.99424 * 180.02562 * 5 4 3 27 27 H 1.48494 * 109.99816 * 298.67977 * 6 4 3 28 28 H 1.48504 * 110.00164 * 59.99580 * 6 4 3 29 29 H 0.97009 * 119.99745 * 0.02562 * 9 8 7 30 30 H 1.08999 * 113.61485 * 254.53562 * 12 10 9 31 31 H 1.09002 * 113.61085 * 25.35439 * 12 10 9 32 32 H 1.07998 * 125.96361 * 359.97438 * 16 15 13 33 33 H 1.07995 * 125.52689 * 180.02562 * 18 17 16 34 34 H 1.08997 * 113.60845 * 334.56367 * 20 10 9 35 35 H 1.08993 * 113.61445 * 105.46441 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 -0.0006 5 8 0.4815 2.5019 -0.6748 6 14 2.9327 3.6147 -0.8787 7 7 3.5851 0.8188 0.0005 8 6 3.9315 -0.4309 0.0015 9 7 5.2385 -0.8926 0.0027 10 6 5.5066 -2.3328 0.0043 11 1 4.6808 -2.9175 -0.4011 12 6 6.8751 -2.7053 -0.5901 13 6 6.9926 -3.7465 0.5355 14 1 7.9928 -3.8162 0.9631 15 7 6.4307 -5.0538 0.1866 16 6 5.1454 -5.4328 0.2936 17 7 5.0516 -6.6709 -0.1187 18 6 6.2505 -7.1142 -0.4945 19 7 7.1270 -6.1583 -0.3308 20 6 6.0352 -2.8597 1.3489 21 16 2.5413 -1.4261 0.0096 22 1 -0.3633 0.0000 -1.0277 23 1 -0.3634 -0.8900 0.5138 24 1 -0.3633 0.8900 0.5138 25 1 1.6088 2.8217 1.0269 26 1 0.0694 3.3758 -0.7137 27 1 4.2370 3.6284 -0.1691 28 1 3.1221 3.1636 -2.2808 29 1 5.9756 -0.2620 0.0032 30 1 6.8138 -3.1440 -1.5861 31 1 7.6120 -1.9048 -0.5248 32 1 4.3321 -4.8219 0.6566 33 1 6.4630 -8.1016 -0.8769 34 1 6.5428 -2.1018 1.9455 35 1 5.2958 -3.4228 1.9182 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494096_15704122.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:24 Heat of formation + Delta-G solvation = 151.513106 kcal Electronic energy + Delta-G solvation = -20959.386384 eV Core-core repulsion = 17703.442568 eV Total energy + Delta-G solvation = -3255.943816 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.089 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -43.32495 -41.18548 -40.55924 -37.78123 -35.96744 -33.34046 -32.45780 -31.98641 -29.35047 -27.44496 -26.67338 -25.57486 -24.31981 -23.51537 -22.82901 -21.43360 -20.16709 -19.46544 -18.46063 -18.11491 -17.46920 -17.34341 -16.62495 -16.29511 -16.20086 -15.90356 -15.64680 -15.28020 -14.98194 -14.41279 -14.12277 -14.03476 -13.93470 -13.77598 -13.66445 -13.37925 -13.12686 -12.88881 -12.69498 -12.17248 -12.05763 -11.74871 -11.23040 -11.05746 -10.86416 -10.75906 -10.69973 -10.35649 -10.05547 -8.71926 -4.85657 -0.03895 0.07488 0.51187 0.69596 1.05133 1.33809 1.64916 1.84379 1.89168 1.94283 2.31868 2.62838 2.86347 3.02896 3.10235 3.24258 3.36371 3.70109 3.82788 3.91109 3.94993 4.11709 4.13208 4.26825 4.30737 4.34054 4.39020 4.43345 4.50864 4.83639 4.88311 5.07040 5.18150 5.32578 5.36866 5.41896 5.68606 6.09045 6.58439 6.81646 7.02423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 C -0.219 4.219 3 C 0.098 3.902 4 C -0.036 4.036 5 O -0.544 6.544 6 Si 0.712 3.288 7 N -0.544 5.544 8 C 0.315 3.685 9 N -0.683 5.683 10 C 0.125 3.875 11 H 0.109 0.891 12 C -0.147 4.147 13 C 0.135 3.865 14 H 0.126 0.874 15 N -0.367 5.367 16 C 0.251 3.749 17 N -0.539 5.539 18 C 0.202 3.798 19 N -0.313 5.313 20 C -0.157 4.157 21 S 0.099 5.901 22 H 0.074 0.926 23 H 0.058 0.942 24 H 0.089 0.911 25 H 0.081 0.919 26 H 0.386 0.614 27 H -0.252 1.252 28 H -0.264 1.264 29 H 0.415 0.585 30 H 0.090 0.910 31 H 0.115 0.885 32 H 0.214 0.786 33 H 0.221 0.779 34 H 0.120 0.880 35 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.893 3.665 2.127 4.330 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.342 4.342 3 C -0.031 4.031 4 C -0.148 4.148 5 O -0.350 6.350 6 Si 0.612 3.388 7 N -0.271 5.271 8 C -0.056 4.056 9 N -0.324 5.324 10 C 0.019 3.981 11 H 0.127 0.873 12 C -0.187 4.187 13 C 0.030 3.970 14 H 0.144 0.856 15 N -0.158 5.158 16 C -0.046 4.046 17 N -0.265 5.265 18 C -0.101 4.101 19 N -0.139 5.139 20 C -0.198 4.198 21 S 0.348 5.652 22 H 0.092 0.908 23 H 0.077 0.923 24 H 0.108 0.892 25 H 0.099 0.901 26 H 0.234 0.766 27 H -0.177 1.177 28 H -0.189 1.189 29 H 0.254 0.746 30 H 0.109 0.891 31 H 0.133 0.867 32 H 0.231 0.769 33 H 0.237 0.763 34 H 0.138 0.862 35 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 0.756 2.027 1.479 2.620 hybrid contribution -0.015 0.602 0.335 0.689 sum 0.741 2.628 1.814 3.278 Atomic orbital electron populations 1.20133 0.86022 1.02613 1.02984 1.25190 1.01621 0.92149 1.15198 1.18951 0.86341 0.95187 1.02616 1.23958 0.93174 0.96141 1.01520 1.86467 1.33755 1.35748 1.79075 0.96108 0.78873 0.84673 0.79114 1.65699 1.17312 1.16860 1.27236 1.23242 0.91892 0.91345 0.99153 1.43812 1.01927 1.06100 1.80516 1.22789 0.98326 0.80299 0.96722 0.87280 1.23812 0.96589 0.98452 0.99816 1.21938 0.99720 0.77953 0.97351 0.85633 1.50259 1.06714 1.11109 1.47728 1.26012 0.88080 0.93170 0.97315 1.70620 1.25905 1.09444 1.20573 1.26153 0.85949 0.99916 0.98106 1.78130 1.20663 0.94597 1.20531 1.24083 0.99125 0.98935 0.97629 1.83877 0.96498 1.10777 1.74075 0.90765 0.92336 0.89228 0.90093 0.76598 1.17709 1.18890 0.74646 0.89139 0.86697 0.76940 0.76303 0.86156 0.89142 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.05 8.96 36.01 0.32 0.27 16 2 C -0.22 -0.61 6.50 -36.02 -0.23 -0.84 16 3 C 0.10 0.36 5.95 -84.18 -0.50 -0.14 16 4 C -0.04 -0.03 2.82 36.01 0.10 0.07 16 5 O -0.54 0.34 9.86 -35.23 -0.35 -0.01 16 6 Si 0.71 0.50 32.08 -169.99 -5.45 -4.95 16 7 N -0.54 -2.34 8.95 -11.36 -0.10 -2.44 16 8 C 0.31 0.65 8.24 -87.69 -0.72 -0.07 16 9 N -0.68 0.69 5.51 -54.99 -0.30 0.38 16 10 C 0.13 -0.38 3.82 -67.12 -0.26 -0.63 16 11 H 0.11 -0.28 5.95 -51.93 -0.31 -0.58 16 12 C -0.15 0.51 7.63 -25.92 -0.20 0.31 16 13 C 0.13 -0.39 5.21 -67.12 -0.35 -0.74 16 14 H 0.13 -0.43 8.14 -51.93 -0.42 -0.86 16 15 N -0.37 -0.04 3.81 -55.32 -0.21 -0.25 16 16 C 0.25 0.02 10.83 -90.65 -0.98 -0.96 16 17 N -0.54 -1.42 11.19 -15.83 -0.18 -1.59 16 18 C 0.20 0.38 13.03 -91.81 -1.20 -0.82 16 19 N -0.31 -0.81 12.70 29.29 0.37 -0.44 16 20 C -0.16 0.68 7.14 -25.92 -0.19 0.49 16 21 S 0.10 0.11 21.69 -107.50 -2.33 -2.22 16 22 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 23 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 24 H 0.09 0.04 6.62 -51.93 -0.34 -0.31 16 25 H 0.08 -0.07 7.96 -51.93 -0.41 -0.49 16 26 H 0.39 -2.20 8.74 45.56 0.40 -1.80 16 27 H -0.25 -1.03 7.11 56.52 0.40 -0.63 16 28 H -0.26 -1.31 7.11 56.52 0.40 -0.91 16 29 H 0.41 -0.75 8.85 -40.82 -0.36 -1.11 16 30 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.11 -0.58 8.12 -51.93 -0.42 -1.00 16 32 H 0.21 -0.73 6.76 -52.49 -0.35 -1.08 16 33 H 0.22 -0.30 8.06 -52.49 -0.42 -0.72 16 34 H 0.12 -0.63 8.14 -51.93 -0.42 -1.05 16 35 H 0.09 -0.41 7.04 -51.93 -0.37 -0.78 16 LS Contribution 308.94 15.07 4.66 4.66 Total: 0.00 -10.58 308.94 -12.00 -22.59 By element: Atomic # 1 Polarization: -8.77 SS G_CDS: -3.91 Total: -12.67 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -4.20 Total: -3.05 kcal Atomic # 7 Polarization: -3.91 SS G_CDS: -0.42 Total: -4.34 kcal Atomic # 8 Polarization: 0.34 SS G_CDS: -0.35 Total: -0.01 kcal Atomic # 14 Polarization: 0.50 SS G_CDS: -5.45 Total: -4.95 kcal Atomic # 16 Polarization: 0.11 SS G_CDS: -2.33 Total: -2.22 kcal Total LS contribution 4.66 Total: 4.66 kcal Total: -10.58 -12.00 -22.59 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494096_15704122.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 174.098 kcal (2) G-P(sol) polarization free energy of solvation -10.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 163.517 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.585 kcal (6) G-S(sol) free energy of system = (1) + (5) 151.513 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds