Wall clock time and date at job start Mon Mar 8 2021 06:23:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42890 * 1 3 3 Si 1.86299 * 109.47462 * 2 1 4 4 C 1.50701 * 109.47497 * 239.99708 * 2 1 3 5 5 C 1.37985 * 120.33034 * 119.99784 * 4 2 1 6 6 N 1.32005 * 120.90492 * 179.97438 * 5 4 2 7 7 C 1.32333 * 121.64315 * 0.02562 * 6 5 4 8 8 N 1.39150 * 119.71718 * 179.97438 * 7 6 5 9 9 C 1.46496 * 119.99742 * 359.97438 * 8 7 6 10 10 H 1.08994 * 112.91109 * 23.75163 * 9 8 7 11 11 C 1.53787 * 113.61210 * 155.00427 * 9 8 7 12 12 C 1.53779 * 87.07963 * 139.97940 * 11 9 8 13 13 H 1.08999 * 113.61062 * 219.93155 * 12 11 9 14 14 N 1.46502 * 113.61301 * 89.11687 * 12 11 9 15 15 C 1.34429 * 126.82264 * 274.70443 * 14 12 11 16 16 N 1.30829 * 108.08005 * 179.89689 * 15 14 12 17 17 C 1.33249 * 109.82777 * 0.38401 * 16 15 14 18 18 N 1.30712 * 108.94557 * 359.76049 * 17 16 15 19 19 C 1.53779 * 87.08402 * 334.56577 * 12 11 9 20 20 C 1.39343 * 120.56543 * 0.25644 * 7 6 5 21 21 F 1.35106 * 120.47232 * 179.72544 * 20 7 6 22 22 C 1.38443 * 119.05738 * 359.49075 * 20 7 6 23 23 H 0.96699 * 113.99939 * 300.00378 * 1 2 3 24 24 H 1.08999 * 109.47039 * 119.99750 * 2 1 3 25 25 H 1.48499 * 110.00609 * 178.68272 * 3 2 1 26 26 H 1.48506 * 109.99690 * 299.99738 * 3 2 1 27 27 H 1.08008 * 119.54563 * 0.02562 * 5 4 2 28 28 H 0.97002 * 119.99768 * 180.02562 * 8 7 6 29 29 H 1.08997 * 113.61028 * 254.52900 * 11 9 8 30 30 H 1.09000 * 113.61529 * 25.43039 * 11 9 8 31 31 H 1.08001 * 125.95957 * 0.04211 * 15 14 12 32 32 H 1.07994 * 125.52606 * 179.80284 * 17 16 15 33 33 H 1.09002 * 113.61557 * 270.88569 * 19 12 11 34 34 H 1.09004 * 113.61501 * 139.97990 * 19 12 11 35 35 H 1.08002 * 120.76025 * 180.24292 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7250 -0.0465 -2.1432 6 7 3.1718 -0.6579 -3.2244 7 6 2.8793 -1.9235 -3.4772 8 7 3.3714 -2.5282 -4.6298 9 6 4.2089 -1.7640 -5.5574 10 1 4.7098 -0.9213 -5.0811 11 6 5.1474 -2.6398 -6.4044 12 6 4.8213 -1.7100 -7.5850 13 1 4.6940 -2.2347 -8.5318 14 7 5.7196 -0.5574 -7.6897 15 6 5.6013 0.6173 -7.0468 16 7 6.6014 1.3799 -7.4073 17 6 7.3711 0.7327 -8.2814 18 7 6.8720 -0.4579 -8.4863 19 6 3.4967 -1.3957 -6.8697 20 6 2.0779 -2.6540 -2.6021 21 9 1.7759 -3.9444 -2.8648 22 6 1.5996 -2.0401 -1.4571 23 1 -0.3933 0.4417 0.7650 24 1 1.7922 -0.5138 0.8900 25 1 3.5346 1.7703 0.0321 26 1 1.5615 2.4678 -1.2086 27 1 2.9850 0.9875 -1.9701 28 1 3.1592 -3.4556 -4.8192 29 1 6.1895 -2.5953 -6.0884 30 1 4.7884 -3.6600 -6.5400 31 1 4.8187 0.8840 -6.3520 32 1 8.2631 1.1275 -8.7449 33 1 2.6865 -2.0758 -7.1326 34 1 3.2064 -0.3467 -6.9294 35 1 0.9795 -2.5816 -0.7580 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15494096_17656566.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:23:26 Heat of formation + Delta-G solvation = 104.060891 kcal Electronic energy + Delta-G solvation = -22782.763963 eV Core-core repulsion = 19121.693862 eV Total energy + Delta-G solvation = -3661.070101 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 292.108 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -49.96428 -43.21108 -41.56996 -40.36995 -37.99713 -36.01872 -33.49009 -33.00948 -32.08335 -31.23336 -27.27597 -27.22623 -26.08920 -24.87993 -23.23306 -22.94218 -22.54877 -21.06762 -19.40730 -18.86886 -18.47717 -18.06777 -18.00266 -17.19608 -16.95330 -16.65083 -16.38651 -15.96558 -15.68479 -15.57134 -15.12126 -15.02776 -14.73805 -14.44390 -14.18810 -14.00362 -13.88843 -13.86917 -13.39401 -12.99561 -12.72938 -12.50671 -12.11984 -11.90044 -11.43722 -10.96522 -10.88211 -10.78346 -10.75616 -10.64118 -10.39823 -8.91321 -5.08330 -0.18995 0.01985 0.62249 1.15954 1.16999 1.54997 1.77604 1.85445 2.03599 2.39962 2.80708 2.93914 3.05676 3.08457 3.23800 3.34459 3.38666 3.55243 3.64035 3.73452 3.80351 3.94338 4.08072 4.15176 4.20105 4.24583 4.38077 4.43437 4.46866 4.56331 4.58270 4.74664 4.88631 5.24229 5.29077 5.46783 5.75166 5.80669 6.01128 6.50775 6.79584 7.12519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.060 4.060 3 Si 0.681 3.319 4 C -0.159 4.159 5 C 0.142 3.858 6 N -0.512 5.512 7 C 0.387 3.613 8 N -0.706 5.706 9 C 0.134 3.866 10 H 0.121 0.879 11 C -0.154 4.154 12 C 0.134 3.866 13 H 0.122 0.878 14 N -0.366 5.366 15 C 0.255 3.745 16 N -0.543 5.543 17 C 0.200 3.800 18 N -0.316 5.316 19 C -0.158 4.158 20 C -0.015 4.015 21 F -0.131 7.131 22 C -0.034 4.034 23 H 0.385 0.615 24 H 0.077 0.923 25 H -0.250 1.250 26 H -0.246 1.246 27 H 0.156 0.844 28 H 0.415 0.585 29 H 0.086 0.914 30 H 0.110 0.890 31 H 0.217 0.783 32 H 0.220 0.780 33 H 0.114 0.886 34 H 0.087 0.913 35 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.860 -0.304 4.355 5.219 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.171 4.171 3 Si 0.582 3.418 4 C -0.164 4.164 5 C -0.015 4.015 6 N -0.228 5.228 7 C 0.149 3.851 8 N -0.338 5.338 9 C 0.028 3.972 10 H 0.139 0.861 11 C -0.193 4.193 12 C 0.030 3.970 13 H 0.140 0.860 14 N -0.157 5.157 15 C -0.041 4.041 16 N -0.269 5.269 17 C -0.103 4.103 18 N -0.142 5.142 19 C -0.198 4.198 20 C -0.041 4.041 21 F -0.110 7.110 22 C -0.061 4.061 23 H 0.233 0.767 24 H 0.095 0.905 25 H -0.175 1.175 26 H -0.171 1.171 27 H 0.172 0.828 28 H 0.253 0.747 29 H 0.105 0.895 30 H 0.128 0.872 31 H 0.233 0.767 32 H 0.236 0.764 33 H 0.132 0.868 34 H 0.105 0.895 35 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -1.313 0.231 2.288 2.648 hybrid contribution -0.826 -1.677 0.438 1.920 sum -2.139 -1.446 2.725 3.754 Atomic orbital electron populations 1.86482 1.17114 1.81872 1.49872 1.24467 0.85815 1.10278 0.96575 0.95010 0.80972 0.77890 0.87953 1.19964 1.03299 0.94393 0.98743 1.22142 0.92743 0.98672 0.87945 1.67215 1.26507 1.07541 1.21536 1.18406 0.90358 0.89094 0.87226 1.44442 1.54428 1.14477 1.20491 1.22640 0.91012 0.95839 0.87706 0.86083 1.23846 1.01695 0.99453 0.94296 1.21948 0.88886 0.85490 1.00687 0.86033 1.50244 1.20096 1.12665 1.32650 1.26072 0.98349 0.82836 0.96878 1.70623 1.06034 1.33004 1.17271 1.26123 1.00231 0.88520 0.95418 1.78103 0.98499 1.21310 1.16332 1.24030 0.95955 1.04514 0.95281 1.17965 1.06437 0.81046 0.98630 1.91502 1.92049 1.33581 1.93884 1.21287 0.95816 0.94197 0.94757 0.76741 0.90477 1.17499 1.17054 0.82751 0.74681 0.89491 0.87209 0.76697 0.76422 0.86814 0.89463 0.82975 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.69 12.75 -35.23 -0.45 0.24 16 2 C -0.06 0.09 2.83 36.01 0.10 0.20 16 3 Si 0.68 -1.67 29.82 -169.99 -5.07 -6.74 16 4 C -0.16 -0.15 5.43 -104.47 -0.57 -0.72 16 5 C 0.14 0.23 9.84 -17.57 -0.17 0.06 16 6 N -0.51 -1.10 9.13 -12.36 -0.11 -1.21 16 7 C 0.39 0.56 7.49 -154.85 -1.16 -0.60 16 8 N -0.71 0.67 5.51 -53.06 -0.29 0.37 16 9 C 0.13 -0.24 3.87 -67.12 -0.26 -0.50 16 10 H 0.12 -0.05 6.31 -51.93 -0.33 -0.37 16 11 C -0.15 0.38 7.63 -25.92 -0.20 0.18 16 12 C 0.13 -0.23 5.21 -67.12 -0.35 -0.58 16 13 H 0.12 -0.27 8.14 -51.93 -0.42 -0.70 16 14 N -0.37 -0.48 3.81 -55.32 -0.21 -0.69 16 15 C 0.26 0.36 10.82 -90.66 -0.98 -0.62 16 16 N -0.54 -2.02 11.19 -15.83 -0.18 -2.20 16 17 C 0.20 0.57 13.03 -91.81 -1.20 -0.63 16 18 N -0.32 -1.13 12.70 29.29 0.37 -0.76 16 19 C -0.16 0.45 7.14 -25.92 -0.18 0.27 16 20 C -0.01 -0.02 7.35 -39.09 -0.29 -0.31 16 21 F -0.13 -0.23 16.65 2.25 0.04 -0.19 16 22 C -0.03 -0.04 9.75 -39.26 -0.38 -0.42 16 23 H 0.38 -2.37 8.74 45.56 0.40 -1.97 16 24 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 25 H -0.25 0.03 7.11 56.52 0.40 0.43 16 26 H -0.25 -0.16 7.11 56.52 0.40 0.25 16 27 H 0.16 0.09 4.88 -52.48 -0.26 -0.16 16 28 H 0.42 -0.98 8.20 -40.82 -0.33 -1.32 16 29 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.11 -0.46 8.12 -51.93 -0.42 -0.88 16 31 H 0.22 -0.33 6.76 -52.49 -0.35 -0.69 16 32 H 0.22 -0.12 8.06 -52.49 -0.42 -0.54 16 33 H 0.11 -0.44 8.14 -51.93 -0.42 -0.87 16 34 H 0.09 -0.23 7.02 -51.93 -0.36 -0.59 16 35 H 0.15 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 304.67 15.07 4.59 4.59 Total: 0.00 -8.96 304.67 -10.33 -19.29 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -3.39 Total: -9.03 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -5.64 Total: -3.67 kcal Atomic # 7 Polarization: -4.06 SS G_CDS: -0.42 Total: -4.48 kcal Atomic # 8 Polarization: 0.69 SS G_CDS: -0.45 Total: 0.24 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.04 Total: -0.19 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.07 Total: -6.74 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -8.96 -10.33 -19.29 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15494096_17656566.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.354 kcal (2) G-P(sol) polarization free energy of solvation -8.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.293 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.061 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds