Wall clock time and date at job start Mon Mar 8 2021 07:06:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13593 * 1 3 3 C 1.43210 * 179.97438 * 2 1 4 4 C 1.39628 * 120.14685 * 252.92777 * 3 2 1 5 5 C 1.37953 * 119.84216 * 179.97438 * 4 3 2 6 6 C 1.38366 * 120.15240 * 359.97438 * 5 4 3 7 7 C 1.50693 * 119.84844 * 179.97438 * 6 5 4 8 8 H 1.09006 * 112.84864 * 348.80648 * 7 6 5 9 9 C 1.53777 * 113.61371 * 119.99983 * 7 6 5 10 10 C 1.53779 * 87.08202 * 139.98249 * 9 7 6 11 11 H 1.09002 * 113.61933 * 219.93461 * 10 9 7 12 12 N 1.46507 * 113.61543 * 89.11447 * 10 9 7 13 13 C 1.38405 * 120.00082 * 155.00085 * 12 10 9 14 14 N 1.32501 * 119.21666 * 359.72995 * 13 12 10 15 15 C 1.32274 * 120.74204 * 180.27404 * 14 13 12 16 16 C 1.38612 * 119.19367 * 0.02562 * 15 14 13 17 17 C 1.50703 * 120.71732 * 179.97438 * 16 15 14 18 18 O 1.42902 * 109.46700 * 245.02116 * 17 16 15 19 19 Si 1.86298 * 109.47354 * 5.01654 * 17 16 15 20 20 C 1.38599 * 118.55845 * 359.97438 * 16 15 14 21 21 N 1.32271 * 119.20254 * 359.97438 * 20 16 15 22 22 C 1.53777 * 113.61477 * 217.50170 * 7 6 5 23 23 C 1.38359 * 120.30111 * 0.25763 * 6 5 4 24 24 C 1.37949 * 120.15419 * 359.48883 * 23 6 5 25 25 H 1.07993 * 120.08159 * 359.97438 * 4 3 2 26 26 H 1.07996 * 119.91935 * 180.02562 * 5 4 3 27 27 H 1.09000 * 113.61274 * 25.43369 * 9 7 6 28 28 H 1.09000 * 113.61780 * 254.52699 * 9 7 6 29 29 H 0.96998 * 119.99988 * 335.00459 * 12 10 9 30 30 H 1.07993 * 120.40089 * 180.02562 * 15 14 13 31 31 H 1.08995 * 109.47079 * 125.02128 * 17 16 15 32 32 H 0.96697 * 114.00551 * 59.99612 * 18 17 16 33 33 H 1.48502 * 110.00020 * 58.68104 * 19 17 16 34 34 H 1.48493 * 109.99996 * 180.02562 * 19 17 16 35 35 H 1.08004 * 120.40191 * 180.02562 * 20 16 15 36 36 H 1.08997 * 113.61992 * 105.47275 * 22 7 6 37 37 H 1.09002 * 113.61237 * 334.56039 * 22 7 6 38 38 H 1.08002 * 119.92221 * 179.74156 * 23 6 5 39 39 H 1.08003 * 120.07855 * 180.27871 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2691 0.3554 1.1542 5 6 4.6486 0.3534 1.1474 6 6 5.3374 0.0003 0.0004 7 6 6.8444 0.0010 0.0004 8 1 7.2674 0.4777 0.8847 9 6 7.4610 -1.3723 -0.3136 10 6 8.5070 -0.6225 -1.1553 11 1 8.7603 -1.1271 -2.0877 12 7 9.6879 -0.2100 -0.3927 13 6 10.8948 -0.0105 -1.0400 14 7 10.9660 -0.2023 -2.3491 15 6 12.1054 -0.0256 -2.9974 16 6 13.2321 0.3641 -2.2904 17 6 14.5480 0.5747 -2.9942 18 8 15.4944 -0.3920 -2.5339 19 14 14.3073 0.3820 -4.8315 20 6 13.1224 0.5558 -0.9221 21 7 11.9528 0.3629 -0.3352 22 6 7.4601 0.4919 -1.3204 23 6 4.6489 -0.3477 -1.1481 24 6 3.2695 -0.3549 -1.1537 25 1 2.7328 0.6308 2.0502 26 1 5.1921 0.6272 2.0395 27 1 6.8097 -2.0192 -0.9014 28 1 7.8802 -1.8726 0.5593 29 1 9.6239 -0.0768 0.5660 30 1 12.1571 -0.1830 -4.0646 31 1 14.9185 1.5769 -2.7794 32 1 15.2294 -1.3084 -2.6924 33 1 13.3015 1.3605 -5.3174 34 1 15.5978 0.5867 -5.5370 35 1 13.9813 0.8598 -0.3421 36 1 7.8787 1.4965 -1.2603 37 1 6.8087 0.3546 -2.1835 38 1 5.1928 -0.6182 -2.0411 39 1 2.7333 -0.6311 -2.0497 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15505406_12175864.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:06:53 Heat of formation + Delta-G solvation = 115.991438 kcal Electronic energy + Delta-G solvation = -23212.145638 eV Core-core repulsion = 19701.794350 eV Total energy + Delta-G solvation = -3510.351289 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.122 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.20008 -41.38571 -39.69004 -38.07810 -37.33717 -35.57113 -34.72434 -32.80894 -32.24985 -31.55909 -27.31768 -26.90826 -26.33142 -25.77268 -23.98744 -23.52599 -23.06373 -20.54156 -19.97061 -19.61462 -18.58785 -18.05807 -17.34514 -16.80564 -16.62926 -16.28780 -16.06474 -15.82014 -15.79773 -15.51995 -15.11402 -14.91994 -14.73810 -14.61752 -14.35822 -14.19420 -14.08188 -13.70667 -13.69222 -13.28759 -13.21008 -13.08347 -12.41014 -12.25841 -12.06317 -12.00522 -11.87092 -11.79475 -11.41973 -11.23750 -10.60539 -10.15379 -10.04976 -9.80100 -9.16203 -5.14020 -0.34070 0.02585 0.12493 0.21725 1.19505 1.53858 1.70146 1.71352 1.89240 1.90306 2.76343 2.78904 2.86627 3.07137 3.30018 3.37411 3.47552 3.52616 3.58981 3.67342 3.69509 3.72388 3.76860 3.80844 4.03773 4.15460 4.18182 4.32681 4.46321 4.48990 4.55242 4.63127 4.65295 4.69119 4.79256 4.85879 4.90606 4.96571 5.10446 5.19609 5.25917 5.43690 5.67843 5.75322 5.96835 6.34915 6.48658 6.51873 7.25013 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.414 5.414 2 C 0.250 3.750 3 C -0.033 4.033 4 C -0.067 4.067 5 C -0.117 4.117 6 C -0.040 4.040 7 C -0.080 4.080 8 H 0.101 0.899 9 C -0.136 4.136 10 C 0.135 3.865 11 H 0.112 0.888 12 N -0.678 5.678 13 C 0.570 3.430 14 N -0.560 5.560 15 C 0.200 3.800 16 C -0.293 4.293 17 C -0.046 4.046 18 O -0.540 6.540 19 Si 0.680 3.320 20 C 0.224 3.776 21 N -0.569 5.569 22 C -0.145 4.145 23 C -0.118 4.118 24 C -0.066 4.066 25 H 0.133 0.867 26 H 0.133 0.867 27 H 0.102 0.898 28 H 0.079 0.921 29 H 0.415 0.585 30 H 0.167 0.833 31 H 0.116 0.884 32 H 0.379 0.621 33 H -0.255 1.255 34 H -0.251 1.251 35 H 0.170 0.830 36 H 0.075 0.925 37 H 0.098 0.902 38 H 0.136 0.864 39 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.999 -2.303 -1.249 4.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.089 5.089 2 C -0.065 4.065 3 C -0.036 4.036 4 C -0.087 4.087 5 C -0.135 4.135 6 C -0.041 4.041 7 C -0.099 4.099 8 H 0.119 0.881 9 C -0.174 4.174 10 C 0.029 3.971 11 H 0.130 0.870 12 N -0.314 5.314 13 C 0.213 3.787 14 N -0.282 5.282 15 C 0.033 3.967 16 C -0.302 4.302 17 C -0.159 4.159 18 O -0.346 6.346 19 Si 0.581 3.419 20 C 0.055 3.945 21 N -0.290 5.290 22 C -0.184 4.184 23 C -0.136 4.136 24 C -0.087 4.087 25 H 0.151 0.849 26 H 0.151 0.849 27 H 0.121 0.879 28 H 0.098 0.902 29 H 0.253 0.747 30 H 0.184 0.816 31 H 0.133 0.867 32 H 0.226 0.774 33 H -0.180 1.180 34 H -0.175 1.175 35 H 0.187 0.813 36 H 0.093 0.907 37 H 0.117 0.883 38 H 0.153 0.847 39 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.538 -1.584 -1.484 2.660 hybrid contribution 1.109 0.693 0.570 1.427 sum 2.647 -0.892 -0.913 2.938 Atomic orbital electron populations 1.81306 1.12096 1.08385 1.07080 1.25756 0.92715 0.93973 0.94076 1.16019 0.84317 1.07074 0.96239 1.21214 0.94321 0.96415 0.96753 1.21029 0.93452 1.00539 0.98436 1.19965 0.95192 0.95646 0.93313 1.21715 0.90475 0.98052 0.99616 0.88075 1.23469 0.97125 0.95903 1.00911 1.21852 0.83285 0.95826 0.96129 0.86998 1.43810 1.04801 1.72589 1.10176 1.19342 0.86550 0.87288 0.85478 1.67899 1.28411 1.23552 1.08338 1.22773 0.86483 0.88032 0.99454 1.21722 0.98628 1.12363 0.97458 1.24704 0.86929 0.95203 1.09028 1.86515 1.44778 1.18552 1.84712 0.95021 0.81738 0.90385 0.74709 1.22839 0.93531 0.86797 0.91299 1.67978 0.99747 1.20945 1.40360 1.23630 0.97744 0.99885 0.97144 1.20972 0.93365 1.00790 0.98504 1.21201 0.94262 0.96442 0.96749 0.84885 0.84903 0.87932 0.90236 0.74722 0.81646 0.86708 0.77356 1.17966 1.17526 0.81269 0.90668 0.88334 0.84674 0.84825 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.08 18.54 41.84 0.78 -1.30 16 2 C 0.25 0.52 15.33 -22.47 -0.34 0.18 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.12 9.76 -39.17 -0.38 -0.26 16 5 C -0.12 0.31 9.69 -39.64 -0.38 -0.07 16 6 C -0.04 0.12 5.30 -104.53 -0.55 -0.44 16 7 C -0.08 0.31 3.85 -90.97 -0.35 -0.04 16 8 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 9 C -0.14 0.55 7.29 -25.92 -0.19 0.36 16 10 C 0.14 -0.36 4.34 -67.11 -0.29 -0.65 16 11 H 0.11 -0.20 7.36 -51.93 -0.38 -0.59 16 12 N -0.68 0.78 5.41 -54.99 -0.30 0.49 16 13 C 0.57 0.69 8.43 -322.80 -2.72 -2.03 16 14 N -0.56 -0.52 9.13 -13.93 -0.13 -0.65 16 15 C 0.20 -0.16 9.92 -17.22 -0.17 -0.33 16 16 C -0.29 0.27 5.36 -104.35 -0.56 -0.29 16 17 C -0.05 0.09 2.83 36.01 0.10 0.19 16 18 O -0.54 0.70 12.85 -35.23 -0.45 0.24 16 19 Si 0.68 -1.71 29.88 -169.99 -5.08 -6.79 16 20 C 0.22 0.05 10.99 -17.23 -0.19 -0.14 16 21 N -0.57 -0.99 10.46 -13.93 -0.15 -1.13 16 22 C -0.15 0.46 7.25 -25.92 -0.19 0.27 16 23 C -0.12 0.36 8.60 -39.64 -0.34 0.02 16 24 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 25 H 0.13 -0.38 8.06 -52.49 -0.42 -0.81 16 26 H 0.13 -0.56 8.05 -52.49 -0.42 -0.99 16 27 H 0.10 -0.47 7.73 -51.93 -0.40 -0.87 16 28 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 29 H 0.41 -0.90 8.82 -40.82 -0.36 -1.26 16 30 H 0.17 -0.57 5.07 -52.49 -0.27 -0.83 16 31 H 0.12 -0.19 7.96 -51.93 -0.41 -0.60 16 32 H 0.38 -1.87 8.70 45.56 0.40 -1.47 16 33 H -0.25 0.03 7.11 56.52 0.40 0.43 16 34 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 35 H 0.17 -0.24 8.06 -52.48 -0.42 -0.66 16 36 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 37 H 0.10 -0.39 6.28 -51.93 -0.33 -0.71 16 38 H 0.14 -0.65 6.62 -52.49 -0.35 -0.99 16 39 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 LS Contribution 340.03 15.07 5.12 5.12 Total: 0.00 -8.23 340.03 -12.01 -20.24 By element: Atomic # 1 Polarization: -7.90 SS G_CDS: -4.25 Total: -12.16 kcal Atomic # 6 Polarization: 3.48 SS G_CDS: -7.56 Total: -4.07 kcal Atomic # 7 Polarization: -2.80 SS G_CDS: 0.21 Total: -2.59 kcal Atomic # 8 Polarization: 0.70 SS G_CDS: -0.45 Total: 0.24 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.08 Total: -6.79 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -8.23 -12.01 -20.24 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15505406_12175864.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.236 kcal (2) G-P(sol) polarization free energy of solvation -8.231 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 128.005 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.014 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 115.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds