Wall clock time and date at job start Mon Mar 8 2021 07:06:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.43207 * 179.97438 * 2 1 4 4 C 1.39630 * 120.15178 * 332.93847 * 3 2 1 5 5 C 1.37951 * 119.84317 * 180.02562 * 4 3 2 6 6 C 1.38357 * 120.15101 * 0.02832 * 5 4 3 7 7 C 1.50707 * 119.84476 * 179.97438 * 6 5 4 8 8 H 1.08997 * 112.85069 * 348.79965 * 7 6 5 9 9 C 1.53782 * 113.61258 * 120.00017 * 7 6 5 10 10 C 1.53786 * 87.07909 * 140.06349 * 9 7 6 11 11 H 1.09002 * 113.61357 * 220.01470 * 10 9 7 12 12 N 1.46497 * 113.61643 * 89.19525 * 10 9 7 13 13 C 1.39002 * 120.00361 * 156.52635 * 12 10 9 14 14 N 1.32396 * 119.71093 * 179.72997 * 13 12 10 15 15 C 1.31966 * 121.62145 * 179.71214 * 14 13 12 16 16 C 1.38016 * 120.86004 * 0.56362 * 15 14 13 17 17 C 1.50698 * 120.34061 * 179.70241 * 16 15 14 18 18 O 1.42901 * 109.47495 * 120.02283 * 17 16 15 19 19 Si 1.86303 * 109.46979 * 0.02562 * 17 16 15 20 20 C 1.38889 * 119.32786 * 359.72715 * 16 15 14 21 21 C 1.38296 * 118.50591 * 359.97438 * 20 16 15 22 22 C 1.53781 * 87.17350 * 334.60554 * 10 9 7 23 23 C 1.38363 * 120.30577 * 0.23082 * 6 5 4 24 24 C 1.37945 * 120.15178 * 359.48807 * 23 6 5 25 25 H 1.08000 * 120.08003 * 0.05057 * 4 3 2 26 26 H 1.07995 * 119.92076 * 179.97438 * 5 4 3 27 27 H 1.08993 * 113.61979 * 25.51447 * 9 7 6 28 28 H 1.09000 * 113.68722 * 254.62115 * 9 7 6 29 29 H 0.97006 * 120.00058 * 336.53149 * 12 10 9 30 30 H 1.08002 * 119.57220 * 180.28723 * 15 14 13 31 31 H 1.09007 * 109.47050 * 240.02742 * 17 16 15 32 32 H 0.96699 * 113.99656 * 300.00121 * 18 17 16 33 33 H 1.48500 * 110.00126 * 180.02562 * 19 17 16 34 34 H 1.48504 * 109.99787 * 301.32018 * 19 17 16 35 35 H 1.07996 * 120.74748 * 179.97438 * 20 16 15 36 36 H 1.07998 * 120.45114 * 179.97438 * 21 20 16 37 37 H 1.09001 * 113.61695 * 139.93969 * 22 10 9 38 38 H 1.08997 * 113.61223 * 270.84552 * 22 10 9 39 39 H 1.08006 * 119.92181 * 179.73094 * 23 6 5 40 40 H 1.08001 * 120.07404 * 180.26277 * 24 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5681 0.0006 0.0000 4 6 3.2699 -1.0742 0.5493 5 6 4.6494 -1.0668 0.5464 6 6 5.3374 0.0028 0.0014 7 6 6.8444 0.0040 0.0024 8 1 7.2680 -0.7846 0.6243 9 6 7.4613 0.0775 -1.4043 10 6 8.5077 1.0348 -0.8098 11 1 8.7606 1.8675 -1.4663 12 7 9.6890 0.3538 -0.2742 13 6 10.8934 1.0381 -0.1589 14 7 11.9559 0.4185 0.3310 15 6 13.1190 1.0302 0.4518 16 6 13.2664 2.3509 0.0794 17 6 14.5983 3.0399 0.2286 18 8 15.0489 3.4881 -1.0513 19 14 15.8387 1.8459 0.9405 20 6 12.1745 3.0389 -0.4340 21 6 10.9701 2.3699 -0.5546 22 6 7.4629 1.3900 0.2612 23 6 4.6482 1.0736 -0.5397 24 6 3.2688 1.0766 -0.5487 25 1 2.7340 -1.9097 0.9751 26 1 5.1935 -1.8973 0.9713 27 1 6.8105 0.5459 -2.1426 28 1 7.8803 -0.8680 -1.7487 29 1 9.6307 -0.5749 0.0001 30 1 13.9655 0.4915 0.8515 31 1 14.4923 3.8949 0.8965 32 1 15.1656 2.7785 -1.6978 33 1 17.1564 2.5133 1.0932 34 1 15.3664 1.3479 2.2574 35 1 12.2639 4.0730 -0.7322 36 1 10.1008 2.8746 -0.9494 37 1 7.8829 1.5020 1.2608 38 1 6.8125 2.2179 -0.0210 39 1 5.1915 1.9073 -0.9596 40 1 2.7321 1.9111 -0.9752 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15505406_13915762.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:06:55 Heat of formation + Delta-G solvation = 99.302578 kcal Electronic energy + Delta-G solvation = -23062.632257 eV Core-core repulsion = 19616.983196 eV Total energy + Delta-G solvation = -3445.649061 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.127 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.82034 -41.11549 -39.68330 -37.91649 -37.33823 -35.41901 -33.43741 -32.53455 -32.22926 -30.97991 -27.24882 -26.97416 -26.05698 -24.87938 -24.00460 -23.46495 -22.54533 -20.42823 -19.97579 -19.03811 -18.45733 -17.52346 -17.26863 -16.80048 -16.51808 -16.16083 -16.00277 -15.84070 -15.56178 -15.39101 -15.06171 -14.81258 -14.68234 -14.43671 -14.26856 -14.12162 -14.04620 -13.73140 -13.72047 -13.37290 -13.29013 -13.10286 -12.49589 -12.33736 -12.08536 -12.01302 -11.98434 -11.46149 -11.16094 -10.75381 -10.40562 -10.40221 -10.18201 -9.82956 -8.75953 -5.04654 -0.36829 0.18806 0.21452 0.39869 1.29836 1.61683 1.69197 1.86623 1.93435 1.97476 2.74764 2.81749 2.84317 3.20066 3.40940 3.45007 3.47501 3.55978 3.64251 3.73893 3.74551 3.75624 3.90756 4.00225 4.04829 4.14451 4.26979 4.31059 4.34632 4.48250 4.51518 4.59280 4.60620 4.69698 4.73026 4.81005 4.85419 4.93649 5.00026 5.08053 5.16981 5.29242 5.39984 5.49669 5.64974 5.95657 6.46252 6.49893 6.57622 7.11966 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.413 5.413 2 C 0.250 3.750 3 C -0.032 4.032 4 C -0.066 4.066 5 C -0.116 4.116 6 C -0.041 4.041 7 C -0.078 4.078 8 H 0.102 0.898 9 C -0.134 4.134 10 C 0.129 3.871 11 H 0.100 0.900 12 N -0.705 5.705 13 C 0.409 3.591 14 N -0.539 5.539 15 C 0.156 3.844 16 C -0.235 4.235 17 C -0.052 4.052 18 O -0.543 6.543 19 Si 0.682 3.318 20 C -0.006 4.006 21 C -0.238 4.238 22 C -0.150 4.150 23 C -0.119 4.119 24 C -0.066 4.066 25 H 0.134 0.866 26 H 0.133 0.867 27 H 0.101 0.899 28 H 0.080 0.920 29 H 0.407 0.593 30 H 0.155 0.845 31 H 0.112 0.888 32 H 0.379 0.621 33 H -0.253 1.253 34 H -0.256 1.256 35 H 0.136 0.864 36 H 0.135 0.865 37 H 0.078 0.922 38 H 0.097 0.903 39 H 0.135 0.865 40 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.517 -0.893 -2.192 4.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.088 5.088 2 C -0.066 4.066 3 C -0.036 4.036 4 C -0.087 4.087 5 C -0.134 4.134 6 C -0.042 4.042 7 C -0.096 4.096 8 H 0.120 0.880 9 C -0.173 4.173 10 C 0.022 3.978 11 H 0.118 0.882 12 N -0.337 5.337 13 C 0.174 3.826 14 N -0.256 5.256 15 C -0.002 4.002 16 C -0.240 4.240 17 C -0.164 4.164 18 O -0.348 6.348 19 Si 0.584 3.416 20 C -0.032 4.032 21 C -0.262 4.262 22 C -0.189 4.189 23 C -0.137 4.137 24 C -0.087 4.087 25 H 0.151 0.849 26 H 0.151 0.849 27 H 0.120 0.880 28 H 0.099 0.901 29 H 0.243 0.757 30 H 0.172 0.828 31 H 0.129 0.871 32 H 0.226 0.774 33 H -0.178 1.178 34 H -0.181 1.181 35 H 0.154 0.846 36 H 0.153 0.847 37 H 0.097 0.903 38 H 0.116 0.884 39 H 0.152 0.848 40 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 2.043 -1.250 -1.048 2.615 hybrid contribution -0.132 0.875 0.062 0.887 sum 1.912 -0.375 -0.986 2.183 Atomic orbital electron populations 1.81311 1.12087 1.07242 1.08153 1.25753 0.92713 0.94085 0.94015 1.16020 0.84330 0.97801 1.05431 1.21222 0.94318 0.96718 0.96414 1.21030 0.93461 0.98740 1.00168 1.19961 0.95179 0.93669 0.95376 1.21695 0.90417 0.99237 0.98248 0.87985 1.23431 0.96947 1.00717 0.96156 1.21864 0.84093 0.96221 0.95637 0.88212 1.44146 1.05819 1.14480 1.69258 1.18353 0.86127 0.88495 0.89616 1.67125 0.99198 1.38946 1.20311 1.22209 0.93699 0.90881 0.93393 1.21005 0.97848 0.96280 1.08840 1.24783 0.96618 1.04742 0.90288 1.86491 1.88531 1.37808 1.21944 0.94862 0.78611 0.84198 0.83927 1.21200 0.90652 0.99714 0.91593 1.21501 1.00020 0.94647 1.10040 1.23722 0.97789 0.96657 1.00732 1.20955 0.93367 0.98788 1.00559 1.21199 0.94264 0.96703 0.96505 0.84851 0.84872 0.88019 0.90088 0.75702 0.82845 0.87062 0.77420 1.17816 1.18105 0.84619 0.84748 0.90341 0.88425 0.84764 0.84830 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.01 18.54 41.84 0.78 -1.23 16 2 C 0.25 0.47 15.33 -22.47 -0.34 0.13 16 3 C -0.03 0.03 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 5 C -0.12 0.34 9.69 -39.64 -0.38 -0.05 16 6 C -0.04 0.13 5.30 -104.53 -0.55 -0.42 16 7 C -0.08 0.33 3.86 -90.86 -0.35 -0.02 16 8 H 0.10 -0.44 8.09 -51.93 -0.42 -0.86 16 9 C -0.13 0.63 7.29 -25.92 -0.19 0.44 16 10 C 0.13 -0.50 4.07 -67.12 -0.27 -0.78 16 11 H 0.10 -0.43 6.17 -51.93 -0.32 -0.75 16 12 N -0.71 1.34 5.44 -53.14 -0.29 1.05 16 13 C 0.41 0.18 7.65 -155.02 -1.19 -1.01 16 14 N -0.54 -0.95 10.39 -12.44 -0.13 -1.08 16 15 C 0.16 0.07 9.84 -17.58 -0.17 -0.10 16 16 C -0.23 0.02 5.40 -104.46 -0.56 -0.54 16 17 C -0.05 0.04 2.84 36.00 0.10 0.14 16 18 O -0.54 0.15 12.78 -35.23 -0.45 -0.30 16 19 Si 0.68 -0.94 29.82 -169.99 -5.07 -6.00 16 20 C -0.01 0.00 9.77 -39.32 -0.38 -0.38 16 21 C -0.24 0.11 9.28 -39.22 -0.36 -0.26 16 22 C -0.15 0.62 7.27 -25.82 -0.19 0.43 16 23 C -0.12 0.41 8.60 -39.64 -0.34 0.07 16 24 C -0.07 0.15 9.76 -39.17 -0.38 -0.23 16 25 H 0.13 -0.41 8.06 -52.49 -0.42 -0.83 16 26 H 0.13 -0.59 8.05 -52.49 -0.42 -1.01 16 27 H 0.10 -0.53 7.73 -51.93 -0.40 -0.93 16 28 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 29 H 0.41 -0.92 8.83 -40.82 -0.36 -1.28 16 30 H 0.15 -0.22 4.88 -52.49 -0.26 -0.48 16 31 H 0.11 -0.03 7.96 -51.92 -0.41 -0.45 16 32 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 33 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 34 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 35 H 0.14 -0.16 8.06 -52.49 -0.42 -0.58 16 36 H 0.13 -0.32 6.06 -52.49 -0.32 -0.64 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 38 H 0.10 -0.49 6.31 -51.93 -0.33 -0.82 16 39 H 0.13 -0.71 6.64 -52.48 -0.35 -1.06 16 40 H 0.13 -0.46 8.06 -52.49 -0.42 -0.89 16 LS Contribution 342.46 15.07 5.16 5.16 Total: 0.00 -7.77 342.46 -11.07 -18.84 By element: Atomic # 1 Polarization: -8.51 SS G_CDS: -4.50 Total: -13.01 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: -6.57 Total: -3.42 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: 0.36 Total: -1.26 kcal Atomic # 8 Polarization: 0.15 SS G_CDS: -0.45 Total: -0.30 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.07 Total: -6.00 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -7.77 -11.07 -18.84 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15505406_13915762.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.141 kcal (2) G-P(sol) polarization free energy of solvation -7.765 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.073 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.838 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.303 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds