Wall clock time and date at job start Mon Mar 8 2021 07:06:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43199 * 179.97438 * 2 1 4 4 C 1.39631 * 120.15572 * 314.97787 * 3 2 1 5 5 C 1.37941 * 119.84942 * 180.02562 * 4 3 2 6 6 C 1.38360 * 120.15159 * 359.97036 * 5 4 3 7 7 C 1.50700 * 119.84537 * 180.02562 * 6 5 4 8 8 H 1.09004 * 112.90982 * 348.74695 * 7 6 5 9 9 C 1.53781 * 113.61477 * 120.00303 * 7 6 5 10 10 C 1.53784 * 87.07925 * 139.97965 * 9 7 6 11 11 H 1.09008 * 113.61280 * 219.93771 * 10 9 7 12 12 N 1.46499 * 113.61746 * 89.11984 * 10 9 7 13 13 C 1.38608 * 120.00285 * 154.99364 * 12 10 9 14 14 N 1.29684 * 124.95073 * 0.02562 * 13 12 10 15 15 C 1.32115 * 116.86689 * 179.97438 * 14 13 12 16 16 C 1.33323 * 114.58156 * 359.97438 * 15 14 13 17 17 C 1.50700 * 125.95232 * 180.26731 * 16 15 14 18 18 O 1.42905 * 109.47287 * 299.71369 * 17 16 15 19 19 Si 1.86297 * 109.47076 * 179.71596 * 17 16 15 20 20 S 1.70962 * 124.94713 * 179.97438 * 13 12 10 21 21 C 1.53777 * 87.08605 * 334.56646 * 10 9 7 22 22 C 1.38365 * 120.30452 * 0.28334 * 6 5 4 23 23 C 1.37945 * 120.15001 * 359.48630 * 22 6 5 24 24 H 1.08008 * 120.07031 * 359.97438 * 4 3 2 25 25 H 1.07999 * 119.92051 * 179.97438 * 5 4 3 26 26 H 1.09003 * 113.61103 * 25.43446 * 9 7 6 27 27 H 1.08997 * 113.69126 * 254.53881 * 9 7 6 28 28 H 0.97003 * 119.99402 * 335.00171 * 12 10 9 29 29 H 1.08005 * 122.70872 * 180.02562 * 15 14 13 30 30 H 1.08994 * 109.47160 * 59.71554 * 17 16 15 31 31 H 0.96695 * 113.99654 * 180.02562 * 18 17 16 32 32 H 1.48499 * 110.00196 * 298.68173 * 19 17 16 33 33 H 1.48500 * 110.00248 * 59.99974 * 19 17 16 34 34 H 1.08992 * 113.61530 * 139.97814 * 21 10 9 35 35 H 1.09001 * 113.61556 * 270.88968 * 21 10 9 36 36 H 1.08001 * 119.91912 * 179.71855 * 22 6 5 37 37 H 1.08000 * 120.07781 * 180.25912 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2698 -0.8524 0.8540 5 6 4.6492 -0.8462 0.8492 6 6 5.3374 0.0023 0.0002 7 6 6.8444 0.0030 0.0002 8 1 7.2690 -0.5542 0.8353 9 6 7.4606 -0.3620 -1.3606 10 6 8.5064 0.7331 -1.0923 11 1 8.7591 1.3211 -1.9746 12 7 9.6877 0.2525 -0.3714 13 6 10.8962 0.9192 -0.4988 14 7 11.0892 1.9748 -1.2270 15 6 12.3090 2.4823 -1.2314 16 6 13.1857 1.8253 -0.4717 17 6 14.6378 2.1829 -0.2856 18 8 15.3044 2.1411 -1.5489 19 14 15.4335 0.9638 0.8770 20 16 12.3493 0.4705 0.2823 21 6 7.4598 1.4003 -0.1843 22 6 4.6483 0.8540 -0.8449 23 6 3.2689 0.8547 -0.8538 24 1 2.7338 -1.5150 1.5175 25 1 5.1932 -1.5053 1.5096 26 1 6.8089 -0.1453 -2.2072 27 1 7.8803 -1.3673 -1.3959 28 1 9.6241 -0.5325 0.1949 29 1 12.5743 3.3590 -1.8036 30 1 14.7141 3.1866 0.1325 31 1 16.2451 2.3607 -1.5046 32 1 14.7699 1.0202 2.2042 33 1 15.3361 -0.4087 0.3184 34 1 7.8786 1.8173 0.7315 35 1 6.8079 2.0985 -0.7093 36 1 5.1918 1.5170 -1.5018 37 1 2.7323 1.5170 -1.5170 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15505406_15704118.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:06:56 Heat of formation + Delta-G solvation = 111.736667 kcal Electronic energy + Delta-G solvation = -21628.714530 eV Core-core repulsion = 18272.756898 eV Total energy + Delta-G solvation = -3355.957632 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 314.083 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.47693 -40.64950 -39.49151 -37.78939 -37.48248 -35.34007 -32.40589 -32.02380 -31.21267 -27.22544 -26.70340 -26.33628 -24.66936 -23.76287 -23.30626 -21.27927 -20.24821 -19.92727 -19.22451 -18.43600 -17.83032 -17.00860 -16.67336 -16.37054 -16.01400 -15.78937 -15.62248 -15.40457 -15.17468 -14.90612 -14.72227 -14.48758 -14.34651 -14.24066 -14.09906 -13.81258 -13.47199 -13.25649 -13.00499 -12.87202 -12.52392 -12.23559 -12.15721 -11.88520 -11.80711 -11.24058 -11.06103 -10.75465 -10.39453 -10.19853 -9.96933 -9.68222 -8.81506 -5.17216 -0.25480 -0.16606 -0.02850 0.40672 0.52898 1.25695 1.55145 1.58621 1.86186 1.88845 1.93861 2.07105 2.83107 2.83920 3.42487 3.52900 3.60576 3.69907 3.73205 3.89514 3.96779 3.99392 4.00712 4.25493 4.39846 4.49789 4.50728 4.61162 4.66439 4.77954 4.81189 4.83032 4.92537 5.04872 5.05767 5.11463 5.24045 5.30460 5.35463 5.62595 5.83439 5.87065 6.08323 6.38373 6.87928 6.94681 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.475 5.475 2 C 0.276 3.724 3 C -0.054 4.054 4 C -0.068 4.068 5 C -0.118 4.118 6 C -0.037 4.037 7 C -0.071 4.071 8 H 0.112 0.888 9 C -0.125 4.125 10 C 0.129 3.871 11 H 0.092 0.908 12 N -0.665 5.665 13 C 0.330 3.670 14 N -0.569 5.569 15 C 0.110 3.890 16 C -0.275 4.275 17 C -0.023 4.023 18 O -0.563 6.563 19 Si 0.754 3.246 20 S 0.054 5.946 21 C -0.141 4.141 22 C -0.120 4.120 23 C -0.067 4.067 24 H 0.141 0.859 25 H 0.152 0.848 26 H 0.110 0.890 27 H 0.084 0.916 28 H 0.424 0.576 29 H 0.188 0.812 30 H 0.105 0.895 31 H 0.405 0.595 32 H -0.273 1.273 33 H -0.286 1.286 34 H 0.065 0.935 35 H 0.106 0.894 36 H 0.152 0.848 37 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.349 0.128 1.762 8.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.151 5.151 2 C -0.038 4.038 3 C -0.057 4.057 4 C -0.089 4.089 5 C -0.136 4.136 6 C -0.038 4.038 7 C -0.089 4.089 8 H 0.130 0.870 9 C -0.164 4.164 10 C 0.021 3.979 11 H 0.110 0.890 12 N -0.305 5.305 13 C -0.040 4.040 14 N -0.295 5.295 15 C -0.040 4.040 16 C -0.397 4.397 17 C -0.136 4.136 18 O -0.374 6.374 19 Si 0.658 3.342 20 S 0.302 5.698 21 C -0.180 4.180 22 C -0.137 4.137 23 C -0.088 4.088 24 H 0.159 0.841 25 H 0.170 0.830 26 H 0.128 0.872 27 H 0.103 0.897 28 H 0.263 0.737 29 H 0.205 0.795 30 H 0.123 0.877 31 H 0.256 0.744 32 H -0.199 1.199 33 H -0.213 1.213 34 H 0.084 0.916 35 H 0.124 0.876 36 H 0.169 0.831 37 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 5.576 -1.262 2.351 6.182 hybrid contribution -0.211 0.603 -0.431 0.771 sum 5.365 -0.658 1.920 5.736 Atomic orbital electron populations 1.81317 1.13823 1.10002 1.09990 1.26183 0.93116 0.92237 0.92242 1.16155 0.82888 1.03351 1.03319 1.21365 0.94860 0.96323 0.96317 1.21246 0.93077 0.99661 0.99619 1.20113 0.95561 0.94077 0.94078 1.21693 0.89898 0.98062 0.99271 0.86969 1.23436 0.96255 0.99168 0.97495 1.21977 0.83318 0.97297 0.95271 0.88963 1.43820 1.03891 1.31161 1.51616 1.23948 0.92425 0.93084 0.94590 1.66465 1.23323 1.13093 1.26616 1.21571 0.85339 1.00279 0.96797 1.24647 1.01269 1.01903 1.11886 1.23839 0.88276 1.08284 0.93228 1.86461 1.28640 1.93546 1.28730 0.94182 0.88316 0.76392 0.75318 1.84115 1.03509 1.32006 1.50194 1.23612 0.97421 0.96441 1.00524 1.21178 0.92999 0.99706 0.99852 1.21350 0.94780 0.96300 0.96321 0.84098 0.83012 0.87212 0.89714 0.73660 0.79505 0.87696 0.74357 1.19896 1.21261 0.91626 0.87614 0.83071 0.84047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -5.69 18.54 19.00 0.35 -5.34 16 2 C 0.28 1.51 15.33 88.33 1.35 2.87 16 3 C -0.05 0.05 5.73 -21.36 -0.12 -0.07 16 4 C -0.07 0.27 9.76 22.54 0.22 0.49 16 5 C -0.12 0.80 9.69 22.23 0.22 1.02 16 6 C -0.04 0.27 5.30 -19.81 -0.10 0.16 16 7 C -0.07 0.64 3.85 -11.01 -0.04 0.60 16 8 H 0.11 -1.23 8.09 -2.39 -0.02 -1.25 16 9 C -0.13 1.08 7.29 31.12 0.23 1.31 16 10 C 0.13 -0.57 4.44 45.52 0.20 -0.37 16 11 H 0.09 -0.04 7.66 -2.38 -0.02 -0.06 16 12 N -0.67 1.55 5.42 -327.90 -1.78 -0.23 16 13 C 0.33 1.35 8.09 179.32 1.45 2.80 16 14 N -0.57 -4.20 9.83 -202.03 -1.99 -6.19 16 15 C 0.11 0.66 11.22 83.54 0.94 1.60 16 16 C -0.27 -1.35 5.78 24.57 0.14 -1.20 16 17 C -0.02 0.03 2.98 71.24 0.21 0.24 16 18 O -0.56 0.59 12.85 -148.98 -1.91 -1.33 16 19 Si 0.75 -1.64 31.05 68.60 2.13 0.49 16 20 S 0.05 0.24 20.57 -56.49 -1.16 -0.93 16 21 C -0.14 0.90 7.25 31.12 0.23 1.13 16 22 C -0.12 0.80 8.60 22.23 0.19 0.99 16 23 C -0.07 0.27 9.76 22.54 0.22 0.49 16 24 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 25 H 0.15 -1.64 8.05 -2.91 -0.02 -1.66 16 26 H 0.11 -1.05 7.73 -2.39 -0.02 -1.07 16 27 H 0.08 -0.77 8.14 -2.39 -0.02 -0.79 16 28 H 0.42 -2.90 8.83 -92.71 -0.82 -3.72 16 29 H 0.19 0.50 8.06 -2.91 -0.02 0.47 16 30 H 0.11 -0.61 7.96 -2.39 -0.02 -0.63 16 31 H 0.40 -4.81 8.74 -74.06 -0.65 -5.45 16 32 H -0.27 -0.76 7.11 99.48 0.71 -0.05 16 33 H -0.29 -1.58 7.11 99.48 0.71 -0.87 16 34 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 35 H 0.11 -0.82 6.28 -2.39 -0.01 -0.83 16 36 H 0.15 -1.55 6.62 -2.91 -0.02 -1.56 16 37 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 Total: 0.00 -21.62 337.95 0.68 -20.95 By element: Atomic # 1 Polarization: -19.19 SS G_CDS: -0.29 Total: -19.49 kcal Atomic # 6 Polarization: 6.73 SS G_CDS: 5.33 Total: 12.05 kcal Atomic # 7 Polarization: -8.34 SS G_CDS: -3.41 Total: -11.75 kcal Atomic # 8 Polarization: 0.59 SS G_CDS: -1.91 Total: -1.33 kcal Atomic # 14 Polarization: -1.64 SS G_CDS: 2.13 Total: 0.49 kcal Atomic # 16 Polarization: 0.24 SS G_CDS: -1.16 Total: -0.93 kcal Total: -21.62 0.68 -20.95 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15505406_15704118.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.684 kcal (2) G-P(sol) polarization free energy of solvation -21.624 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 111.060 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.677 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.947 kcal (6) G-S(sol) free energy of system = (1) + (5) 111.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds