Wall clock time and date at job start Mon Mar 8 2021 04:09:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.43195 * 179.97438 * 2 1 4 4 C 1.39635 * 120.15036 * 267.29784 * 3 2 1 5 5 C 1.37949 * 119.84694 * 179.97438 * 4 3 2 6 6 C 1.38360 * 120.15172 * 359.97438 * 5 4 3 7 7 C 1.50690 * 119.84980 * 179.97438 * 6 5 4 8 8 H 1.09000 * 112.90879 * 348.75271 * 7 6 5 9 9 C 1.53786 * 113.61518 * 119.99923 * 7 6 5 10 10 C 1.53781 * 87.17350 * 140.02616 * 9 7 6 11 11 H 1.08998 * 113.61196 * 219.97759 * 10 9 7 12 12 N 1.46506 * 113.61613 * 89.15811 * 10 9 7 13 13 C 1.39139 * 120.00128 * 154.99523 * 12 10 9 14 14 N 1.32333 * 119.71808 * 0.02562 * 13 12 10 15 15 C 1.32008 * 121.64805 * 179.97438 * 14 13 12 16 16 C 1.37987 * 120.90030 * 0.02562 * 15 14 13 17 17 C 1.50698 * 120.32712 * 180.02562 * 16 15 14 18 18 O 1.42899 * 109.47348 * 244.99672 * 17 16 15 19 19 Si 1.86303 * 109.46978 * 4.99971 * 17 16 15 20 20 C 1.38907 * 119.34578 * 359.97438 * 16 15 14 21 21 C 1.38448 * 118.48372 * 359.75418 * 20 16 15 22 22 F 1.35097 * 120.46962 * 180.26790 * 21 20 16 23 23 C 1.53781 * 87.08070 * 334.52830 * 10 9 7 24 24 C 1.38362 * 120.30442 * 0.25728 * 6 5 4 25 25 C 1.37955 * 120.15250 * 359.48568 * 24 6 5 26 26 H 1.08001 * 120.07391 * 0.02562 * 4 3 2 27 27 H 1.07995 * 119.92374 * 179.97438 * 5 4 3 28 28 H 1.09002 * 113.61357 * 25.43533 * 9 7 6 29 29 H 1.09002 * 113.61608 * 254.61695 * 9 7 6 30 30 H 0.97003 * 119.99276 * 335.00814 * 12 10 9 31 31 H 1.07997 * 119.55092 * 179.97438 * 15 14 13 32 32 H 1.09005 * 109.47035 * 124.99389 * 17 16 15 33 33 H 0.96703 * 113.99423 * 60.00256 * 18 17 16 34 34 H 1.48496 * 110.00315 * 58.68086 * 19 17 16 35 35 H 1.48499 * 109.99802 * 180.02562 * 19 17 16 36 36 H 1.07991 * 120.75678 * 180.02562 * 20 16 15 37 37 H 1.09005 * 113.61471 * 139.98321 * 23 10 9 38 38 H 1.09003 * 113.61469 * 270.88099 * 23 10 9 39 39 H 1.08003 * 119.92582 * 179.74441 * 24 6 5 40 40 H 1.07997 * 120.08014 * 180.27887 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2693 0.0579 1.2061 5 6 4.6488 0.0576 1.1988 6 6 5.3374 0.0003 0.0002 7 6 6.8443 0.0010 0.0001 8 1 7.2686 0.2441 0.9743 9 6 7.4609 -1.2515 -0.6450 10 6 8.5086 -0.3183 -1.2746 11 1 8.7612 -0.5764 -2.3030 12 7 9.6901 -0.1101 -0.4336 13 6 10.9040 0.2432 -1.0145 14 7 10.9850 0.3902 -2.3272 15 6 12.1170 0.7250 -2.9181 16 6 13.2654 0.9348 -2.1825 17 6 14.5505 1.3171 -2.8704 18 8 15.5112 0.2732 -2.6994 19 14 14.2295 1.5742 -4.6875 20 6 13.2249 0.7911 -0.8014 21 6 12.0227 0.4448 -0.2086 22 9 11.9365 0.2998 1.1318 23 6 7.4632 0.8036 -1.1600 24 6 4.6489 -0.0518 -1.1988 25 6 3.2693 -0.0575 -1.2060 26 1 2.7330 0.1014 2.1425 27 1 5.1924 0.1023 2.1309 28 1 6.8096 -1.7323 -1.3749 29 1 7.8790 -1.9535 0.0765 30 1 9.6259 -0.2188 0.5281 31 1 12.1448 0.8354 -3.9921 32 1 14.9350 2.2396 -2.4353 33 1 15.2351 -0.5790 -3.0638 34 1 13.2085 2.6355 -4.8777 35 1 15.4893 1.9511 -5.3774 36 1 14.1100 0.9502 -0.2035 37 1 7.8828 1.7618 -0.8532 38 1 6.8125 0.8848 -2.0307 39 1 5.1926 -0.0922 -2.1311 40 1 2.7331 -0.1028 -2.1423 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15505406_17656566.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:09:17 Heat of formation + Delta-G solvation = 53.747955 kcal Electronic energy + Delta-G solvation = -25537.840486 eV Core-core repulsion = 21620.762053 eV Total energy + Delta-G solvation = -3917.078433 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.117 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -49.91590 -41.74979 -41.15993 -39.65347 -38.00772 -37.32098 -35.53582 -33.28134 -32.57248 -32.20913 -30.98731 -27.23506 -26.89027 -26.31352 -25.04544 -23.94683 -23.24948 -22.96389 -20.48547 -19.97004 -19.51939 -18.58257 -18.25613 -17.56320 -17.30109 -16.98785 -16.78119 -16.24312 -16.13554 -15.94588 -15.77773 -15.41212 -15.23551 -14.99405 -14.79352 -14.68018 -14.45638 -14.35519 -14.08304 -14.01691 -13.70226 -13.68748 -13.53364 -13.24403 -13.06150 -12.66255 -12.40731 -12.14613 -12.03874 -11.99507 -11.40979 -11.22161 -10.74425 -10.69696 -10.49581 -10.15436 -9.79803 -8.83470 -5.12287 -0.34166 -0.11852 0.07006 0.21628 1.19056 1.55592 1.71024 1.84089 1.89175 1.90991 2.49752 2.77597 2.86620 2.99301 3.15458 3.32667 3.37500 3.49532 3.54036 3.55592 3.69769 3.76718 3.78895 3.80941 3.92614 4.03600 4.18065 4.32450 4.35694 4.40945 4.50503 4.56117 4.63448 4.64126 4.69507 4.78633 4.86351 4.90941 4.93662 4.99151 5.11031 5.19588 5.36298 5.44166 5.67791 5.90672 6.10378 6.49089 6.51800 6.89067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.414 5.414 2 C 0.250 3.750 3 C -0.033 4.033 4 C -0.066 4.066 5 C -0.117 4.117 6 C -0.040 4.040 7 C -0.081 4.081 8 H 0.100 0.900 9 C -0.137 4.137 10 C 0.133 3.867 11 H 0.111 0.889 12 N -0.700 5.700 13 C 0.393 3.607 14 N -0.510 5.510 15 C 0.149 3.851 16 C -0.209 4.209 17 C -0.055 4.055 18 O -0.540 6.540 19 Si 0.684 3.316 20 C -0.037 4.037 21 C -0.020 4.020 22 F -0.133 7.133 23 C -0.145 4.145 24 C -0.118 4.118 25 C -0.066 4.066 26 H 0.133 0.867 27 H 0.133 0.867 28 H 0.101 0.899 29 H 0.078 0.922 30 H 0.413 0.587 31 H 0.164 0.836 32 H 0.115 0.885 33 H 0.380 0.620 34 H -0.253 1.253 35 H -0.251 1.251 36 H 0.149 0.851 37 H 0.074 0.926 38 H 0.098 0.902 39 H 0.136 0.864 40 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.850 -1.939 -1.871 4.700 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.089 5.089 2 C -0.065 4.065 3 C -0.037 4.037 4 C -0.087 4.087 5 C -0.135 4.135 6 C -0.041 4.041 7 C -0.099 4.099 8 H 0.118 0.882 9 C -0.175 4.175 10 C 0.027 3.973 11 H 0.129 0.871 12 N -0.332 5.332 13 C 0.155 3.845 14 N -0.226 5.226 15 C -0.008 4.008 16 C -0.214 4.214 17 C -0.167 4.167 18 O -0.345 6.345 19 Si 0.585 3.415 20 C -0.064 4.064 21 C -0.046 4.046 22 F -0.112 7.112 23 C -0.184 4.184 24 C -0.136 4.136 25 C -0.086 4.086 26 H 0.151 0.849 27 H 0.151 0.849 28 H 0.120 0.880 29 H 0.096 0.904 30 H 0.250 0.750 31 H 0.180 0.820 32 H 0.133 0.867 33 H 0.227 0.773 34 H -0.178 1.178 35 H -0.176 1.176 36 H 0.167 0.833 37 H 0.093 0.907 38 H 0.116 0.884 39 H 0.153 0.847 40 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 1.525 -1.063 -2.828 3.384 hybrid contribution 1.057 0.388 1.915 2.221 sum 2.583 -0.675 -0.913 2.821 Atomic orbital electron populations 1.81311 1.12086 1.08524 1.06943 1.25753 0.92714 0.93961 0.94089 1.16017 0.84322 1.08199 0.95121 1.21214 0.94313 0.96378 0.96794 1.21023 0.93457 1.00803 0.98205 1.19960 0.95190 0.95852 0.93079 1.21753 0.90453 0.97898 0.99816 0.88191 1.23466 0.97272 0.96093 1.00678 1.21816 0.83611 0.95795 0.96076 0.87077 1.44226 1.05565 1.74200 1.09240 1.18375 0.85613 0.91716 0.88832 1.67275 1.28112 1.19493 1.07758 1.22322 0.86565 0.92404 0.99515 1.20944 0.97719 1.08746 0.93992 1.24865 0.87566 0.93594 1.10651 1.86520 1.42680 1.21637 1.83702 0.94900 0.81572 0.88775 0.76210 1.21295 0.96311 0.93950 0.94817 1.17998 0.95062 1.13393 0.78143 1.91495 1.96719 1.94104 1.28912 1.23672 0.97787 0.98633 0.98315 1.20974 0.93360 1.00964 0.98317 1.21204 0.94261 0.96401 0.96779 0.84889 0.84933 0.88032 0.90380 0.75006 0.81978 0.86732 0.77284 1.17816 1.17598 0.83312 0.90676 0.88416 0.84675 0.84821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -2.08 18.54 41.84 0.78 -1.31 16 2 C 0.25 0.53 15.33 -22.47 -0.34 0.18 16 3 C -0.03 0.02 5.73 -106.93 -0.61 -0.59 16 4 C -0.07 0.12 9.76 -39.17 -0.38 -0.27 16 5 C -0.12 0.30 9.69 -39.64 -0.38 -0.08 16 6 C -0.04 0.11 5.30 -104.54 -0.55 -0.44 16 7 C -0.08 0.30 3.87 -90.82 -0.35 -0.05 16 8 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 9 C -0.14 0.54 7.28 -25.92 -0.19 0.35 16 10 C 0.13 -0.37 4.35 -67.11 -0.29 -0.66 16 11 H 0.11 -0.22 7.41 -51.93 -0.38 -0.60 16 12 N -0.70 1.14 5.42 -53.06 -0.29 0.85 16 13 C 0.39 0.09 7.49 -154.87 -1.16 -1.07 16 14 N -0.51 -0.13 9.13 -12.37 -0.11 -0.24 16 15 C 0.15 -0.18 9.84 -17.57 -0.17 -0.35 16 16 C -0.21 0.23 5.36 -104.47 -0.56 -0.32 16 17 C -0.06 0.10 2.82 36.00 0.10 0.20 16 18 O -0.54 0.59 12.84 -35.23 -0.45 0.14 16 19 Si 0.68 -1.75 29.83 -169.99 -5.07 -6.82 16 20 C -0.04 0.01 9.82 -39.26 -0.39 -0.38 16 21 C -0.02 -0.01 7.35 -39.09 -0.29 -0.30 16 22 F -0.13 -0.16 16.65 2.25 0.04 -0.13 16 23 C -0.15 0.46 7.26 -25.78 -0.19 0.27 16 24 C -0.12 0.35 8.60 -39.64 -0.34 0.01 16 25 C -0.07 0.13 9.76 -39.17 -0.38 -0.25 16 26 H 0.13 -0.38 8.06 -52.49 -0.42 -0.80 16 27 H 0.13 -0.55 8.05 -52.49 -0.42 -0.97 16 28 H 0.10 -0.45 7.73 -51.93 -0.40 -0.85 16 29 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 30 H 0.41 -1.06 8.18 -40.82 -0.33 -1.39 16 31 H 0.16 -0.58 4.91 -52.49 -0.26 -0.84 16 32 H 0.12 -0.16 7.96 -51.93 -0.41 -0.57 16 33 H 0.38 -1.87 8.70 45.56 0.40 -1.47 16 34 H -0.25 0.07 7.11 56.52 0.40 0.47 16 35 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 36 H 0.15 -0.13 8.06 -52.49 -0.42 -0.56 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 38 H 0.10 -0.38 6.30 -51.93 -0.33 -0.71 16 39 H 0.14 -0.63 6.63 -52.48 -0.35 -0.98 16 40 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 LS Contribution 350.61 15.07 5.28 5.28 Total: 0.00 -7.50 350.61 -10.53 -18.03 By element: Atomic # 1 Polarization: -7.84 SS G_CDS: -4.22 Total: -12.06 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -6.48 Total: -3.74 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: 0.38 Total: -0.70 kcal Atomic # 8 Polarization: 0.59 SS G_CDS: -0.45 Total: 0.14 kcal Atomic # 9 Polarization: -0.16 SS G_CDS: 0.04 Total: -0.13 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.07 Total: -6.82 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -7.50 -10.53 -18.03 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15505406_17656566.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.779 kcal (2) G-P(sol) polarization free energy of solvation -7.498 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.031 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.748 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds