Wall clock time and date at job start Mon Mar 8 2021 04:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34715 * 116.99851 * 2 1 4 4 O 1.21476 * 119.99899 * 359.97438 * 3 2 1 5 5 C 1.47723 * 120.00354 * 179.97438 * 3 2 1 6 6 C 1.39616 * 120.15142 * 180.28768 * 5 3 2 7 7 C 1.37964 * 119.84432 * 180.22955 * 6 5 3 8 8 C 1.50701 * 119.92109 * 179.75596 * 7 6 5 9 9 H 1.09002 * 112.85178 * 9.39226 * 8 7 6 10 10 C 1.53785 * 113.69000 * 140.66384 * 8 7 6 11 11 C 1.53779 * 87.08093 * 139.98979 * 10 8 7 12 12 H 1.08994 * 113.61314 * 220.01752 * 11 10 8 13 13 N 1.46504 * 113.61484 * 89.11287 * 11 10 8 14 14 C 1.38407 * 119.99738 * 107.50024 * 13 11 10 15 15 N 1.32498 * 119.21753 * 359.73619 * 14 13 11 16 16 C 1.32273 * 120.73855 * 179.72061 * 15 14 13 17 17 C 1.38609 * 119.19801 * 0.53598 * 16 15 14 18 18 C 1.50698 * 120.71912 * 179.75571 * 17 16 15 19 19 O 1.42902 * 109.47113 * 244.97583 * 18 17 16 20 20 Si 1.86300 * 109.47452 * 4.98209 * 18 17 16 21 21 C 1.38603 * 118.55665 * 359.73508 * 17 16 15 22 22 N 1.32279 * 119.19886 * 359.97438 * 21 17 16 23 23 C 1.53781 * 113.61206 * 238.19920 * 8 7 6 24 24 C 1.38343 * 120.15060 * 359.47921 * 7 6 5 25 25 C 1.38385 * 120.30699 * 0.27706 * 24 7 6 26 26 C 1.37929 * 120.14869 * 359.97275 * 25 24 7 27 27 H 1.09004 * 109.46869 * 60.00793 * 1 2 3 28 28 H 1.08997 * 109.46568 * 179.97438 * 1 2 3 29 29 H 1.08991 * 109.47189 * 300.00022 * 1 2 3 30 30 H 1.08000 * 120.07418 * 359.97438 * 6 5 3 31 31 H 1.09003 * 113.60734 * 254.54099 * 10 8 7 32 32 H 1.08996 * 113.61146 * 25.43597 * 10 8 7 33 33 H 0.96996 * 119.99953 * 287.50554 * 13 11 10 34 34 H 1.08001 * 120.40176 * 180.25029 * 16 15 14 35 35 H 1.09004 * 109.46965 * 124.97872 * 18 17 16 36 36 H 0.96703 * 113.99490 * 60.00629 * 19 18 17 37 37 H 1.48497 * 110.00034 * 180.02562 * 20 18 17 38 38 H 1.48507 * 109.99743 * 301.31655 * 20 18 17 39 39 H 1.08003 * 120.39802 * 179.97438 * 21 17 16 40 40 H 1.09005 * 113.61302 * 334.48043 * 23 8 7 41 41 H 1.08996 * 113.61527 * 105.30207 * 23 8 7 42 42 H 1.08003 * 119.84597 * 180.29258 * 24 7 6 43 43 H 1.07994 * 119.93099 * 179.97438 * 25 24 7 44 44 H 1.07995 * 120.07257 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0636 1.2003 0.0000 4 8 1.4019 2.2191 -0.0005 5 6 3.5388 1.2778 0.0006 6 6 4.1758 2.5201 0.0066 7 6 5.5539 2.5851 0.0023 8 6 6.2433 3.9252 0.0033 9 1 5.5562 4.7545 0.1714 10 6 7.4973 3.9743 0.8920 11 6 8.1543 4.8131 -0.2168 12 1 9.1995 4.5601 -0.3945 13 7 7.9330 6.2540 -0.0718 14 6 8.9726 7.0774 0.3245 15 7 10.1601 6.5452 0.5737 16 6 11.1761 7.3046 0.9489 17 6 10.9834 8.6699 1.0909 18 6 12.1155 9.5663 1.5219 19 8 11.8133 10.1355 2.7974 20 14 13.6852 8.5702 1.6424 21 6 9.7271 9.1927 0.8275 22 7 8.7554 8.3783 0.4502 23 6 7.1814 4.1361 -1.1968 24 6 6.3043 1.4229 0.0029 25 6 5.6794 0.1881 0.0020 26 6 4.3024 0.1086 0.0011 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3632 -1.0277 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 3.5911 3.4281 0.0105 31 1 7.3508 4.5204 1.8240 32 1 7.9662 3.0014 1.0395 33 1 7.0579 6.6310 -0.2534 34 1 12.1428 6.8656 1.1468 35 1 12.2464 10.3635 0.7901 36 1 11.6837 9.4824 3.4987 37 1 14.8091 9.4428 2.0673 38 1 13.5092 7.4606 2.6136 39 1 9.5438 10.2522 0.9290 40 1 7.5641 3.2075 -1.6203 41 1 6.7795 4.8117 -1.9518 42 1 7.3829 1.4795 0.0043 43 1 6.2712 -0.7152 0.0021 44 1 3.8161 -0.8556 0.0009 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15508396_12175864.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:33:47 Heat of formation + Delta-G solvation = 4.789003 kcal Electronic energy + Delta-G solvation = -27910.831928 eV Core-core repulsion = 23796.408588 eV Total energy + Delta-G solvation = -4114.423340 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.141 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.17465 -41.66332 -40.95855 -39.23826 -38.12787 -37.37402 -35.60034 -34.69357 -32.80981 -32.34058 -31.53103 -28.73105 -27.03072 -26.84507 -26.17166 -25.62404 -24.98782 -23.29683 -22.92384 -21.90814 -20.34094 -19.64819 -18.85343 -18.40275 -18.12796 -18.09604 -17.31336 -17.10962 -16.69455 -16.61523 -16.27357 -16.11902 -15.97751 -15.74256 -15.51491 -14.99966 -14.70386 -14.61051 -14.56292 -14.42347 -14.10611 -13.99221 -13.67331 -13.30345 -13.19191 -13.13433 -12.94459 -12.70042 -12.24992 -12.05639 -11.91812 -11.85340 -11.77723 -11.74442 -11.61765 -11.35428 -11.16847 -10.73285 -10.10984 -10.01928 -9.81768 -9.13609 -5.04300 -0.35731 0.05143 0.15787 0.24783 1.20351 1.50126 1.52461 1.67866 1.73959 1.90077 2.65824 2.79767 3.10869 3.30574 3.34646 3.51221 3.56947 3.61663 3.64539 3.70035 3.74126 3.77321 3.85542 4.01394 4.05873 4.16084 4.17577 4.20887 4.25424 4.34892 4.52524 4.54447 4.56530 4.59100 4.67945 4.70508 4.76615 4.85723 4.89295 4.92634 5.01517 5.21324 5.23274 5.29212 5.37800 5.48398 5.75256 5.78720 6.00265 6.33011 6.38583 6.73828 7.28384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.355 6.355 3 C 0.507 3.493 4 O -0.504 6.504 5 C -0.125 4.125 6 C -0.050 4.050 7 C -0.082 4.082 8 C -0.075 4.075 9 H 0.100 0.900 10 C -0.145 4.145 11 C 0.137 3.863 12 H 0.112 0.888 13 N -0.678 5.678 14 C 0.570 3.430 15 N -0.560 5.560 16 C 0.198 3.802 17 C -0.292 4.292 18 C -0.053 4.053 19 O -0.530 6.530 20 Si 0.680 3.320 21 C 0.224 3.776 22 N -0.569 5.569 23 C -0.137 4.137 24 C -0.079 4.079 25 C -0.129 4.129 26 C -0.065 4.065 27 H 0.065 0.935 28 H 0.105 0.895 29 H 0.065 0.935 30 H 0.137 0.863 31 H 0.074 0.926 32 H 0.097 0.903 33 H 0.415 0.585 34 H 0.167 0.833 35 H 0.120 0.880 36 H 0.376 0.624 37 H -0.253 1.253 38 H -0.258 1.258 39 H 0.170 0.830 40 H 0.101 0.899 41 H 0.079 0.921 42 H 0.132 0.868 43 H 0.134 0.866 44 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.868 -3.757 -1.829 5.068 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.272 6.272 3 C 0.352 3.648 4 O -0.393 6.393 5 C -0.126 4.126 6 C -0.069 4.069 7 C -0.082 4.082 8 C -0.093 4.093 9 H 0.118 0.882 10 C -0.184 4.184 11 C 0.030 3.970 12 H 0.130 0.870 13 N -0.313 5.313 14 C 0.214 3.786 15 N -0.282 5.282 16 C 0.030 3.970 17 C -0.300 4.300 18 C -0.165 4.165 19 O -0.336 6.336 20 Si 0.581 3.419 21 C 0.056 3.944 22 N -0.290 5.290 23 C -0.175 4.175 24 C -0.097 4.097 25 C -0.147 4.147 26 C -0.083 4.083 27 H 0.084 0.916 28 H 0.123 0.877 29 H 0.084 0.916 30 H 0.154 0.846 31 H 0.093 0.907 32 H 0.115 0.885 33 H 0.253 0.747 34 H 0.184 0.816 35 H 0.138 0.862 36 H 0.223 0.777 37 H -0.178 1.178 38 H -0.183 1.183 39 H 0.187 0.813 40 H 0.120 0.880 41 H 0.097 0.903 42 H 0.150 0.850 43 H 0.152 0.848 44 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.575 -4.009 -1.963 5.153 hybrid contribution -0.727 0.774 1.261 1.649 sum 1.848 -3.235 -0.702 3.791 Atomic orbital electron populations 1.23338 0.75451 1.04099 1.02857 1.86533 1.23965 1.32468 1.84205 1.21245 0.89179 0.81580 0.72759 1.90856 1.66807 1.36046 1.45599 1.19089 0.88986 0.95055 1.09468 1.21174 0.94018 0.96801 0.94862 1.19620 0.92653 0.95088 1.00826 1.21629 0.95710 0.94321 0.97633 0.88194 1.23623 0.95428 1.01092 0.98219 1.21833 1.00879 0.78258 0.96020 0.87005 1.43824 1.10380 1.05389 1.71730 1.19350 0.86394 0.85488 0.87390 1.67925 0.99751 1.39972 1.20581 1.22850 0.96658 0.89446 0.88061 1.21652 0.99233 0.96712 1.12412 1.24679 1.02589 1.02035 0.87169 1.86617 1.91915 1.36727 1.18330 0.95192 0.76733 0.79323 0.90671 1.22849 0.86533 0.99564 0.85482 1.67984 1.35856 1.03354 1.21834 1.23482 0.95996 1.01648 0.96398 1.21332 1.00509 0.91788 0.96104 1.21191 0.94324 0.98178 1.00958 1.21507 0.94044 0.97974 0.94805 0.91625 0.87672 0.91631 0.84555 0.90714 0.88485 0.74684 0.81640 0.86200 0.77664 1.17766 1.18255 0.81252 0.88048 0.90257 0.85033 0.84809 0.84366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.75 9.82 -40.53 -0.40 -1.14 16 3 C 0.51 1.77 7.90 34.61 0.27 2.04 16 4 O -0.50 -3.04 16.14 -19.25 -0.31 -3.35 16 5 C -0.12 -0.23 5.87 -104.98 -0.62 -0.84 16 6 C -0.05 -0.06 9.25 -39.17 -0.36 -0.42 16 7 C -0.08 0.05 5.29 -104.68 -0.55 -0.50 16 8 C -0.07 0.14 3.85 -90.96 -0.35 -0.21 16 9 H 0.10 -0.19 8.08 -51.93 -0.42 -0.61 16 10 C -0.14 0.26 7.26 -25.92 -0.19 0.08 16 11 C 0.14 -0.21 4.33 -67.11 -0.29 -0.50 16 12 H 0.11 -0.10 7.37 -51.93 -0.38 -0.48 16 13 N -0.68 0.04 5.41 -55.00 -0.30 -0.26 16 14 C 0.57 1.16 8.43 -322.80 -2.72 -1.56 16 15 N -0.56 -0.95 9.13 -13.93 -0.13 -1.07 16 16 C 0.20 -0.02 9.92 -17.22 -0.17 -0.19 16 17 C -0.29 0.12 5.36 -104.35 -0.56 -0.43 16 18 C -0.05 0.08 2.83 36.00 0.10 0.18 16 19 O -0.53 -0.07 12.85 -35.23 -0.45 -0.52 16 20 Si 0.68 -1.45 29.95 -169.99 -5.09 -6.54 16 21 C 0.22 0.17 10.99 -17.22 -0.19 -0.02 16 22 N -0.57 -1.40 10.46 -13.93 -0.15 -1.54 16 23 C -0.14 0.36 7.29 -25.92 -0.19 0.17 16 24 C -0.08 0.13 8.54 -39.49 -0.34 -0.21 16 25 C -0.13 0.17 10.03 -39.64 -0.40 -0.22 16 26 C -0.07 0.00 9.62 -39.17 -0.38 -0.38 16 27 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 28 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 29 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 30 H 0.14 0.17 7.64 -52.49 -0.40 -0.23 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.10 -0.26 6.39 -51.93 -0.33 -0.60 16 33 H 0.42 -0.37 8.82 -40.82 -0.36 -0.73 16 34 H 0.17 -0.40 5.01 -52.49 -0.26 -0.66 16 35 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 36 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16 37 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 38 H -0.26 0.09 7.02 56.52 0.40 0.48 16 39 H 0.17 -0.17 8.06 -52.48 -0.42 -0.59 16 40 H 0.10 -0.33 7.63 -51.93 -0.40 -0.73 16 41 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 42 H 0.13 -0.47 6.70 -52.48 -0.35 -0.83 16 43 H 0.13 -0.46 8.06 -52.49 -0.42 -0.88 16 44 H 0.14 -0.16 7.61 -52.49 -0.40 -0.56 16 LS Contribution 373.93 15.07 5.64 5.64 Total: 0.00 -8.44 373.93 -12.53 -20.97 By element: Atomic # 1 Polarization: -4.74 SS G_CDS: -5.48 Total: -10.22 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: -5.86 Total: -1.96 kcal Atomic # 7 Polarization: -2.30 SS G_CDS: -0.57 Total: -2.87 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -1.16 Total: -5.01 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.09 Total: -6.54 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -8.44 -12.53 -20.97 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15508396_12175864.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.754 kcal (2) G-P(sol) polarization free energy of solvation -8.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.965 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds