Wall clock time and date at job start Mon Mar 8 2021 04:39:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 O 1.45199 * 109.47381 * 2 1 4 4 C 1.34229 * 117.00332 * 180.02562 * 3 2 1 5 5 O 1.20823 * 120.00165 * 0.02562 * 4 3 2 6 6 C 1.50706 * 119.99756 * 179.97438 * 4 3 2 7 7 H 1.09001 * 112.84618 * 48.80358 * 6 4 3 8 8 C 1.53781 * 113.61143 * 179.97438 * 6 4 3 9 9 C 1.53785 * 87.07778 * 140.06445 * 8 6 4 10 10 F 1.39904 * 113.60776 * 89.20301 * 9 8 6 11 11 C 1.52998 * 113.61583 * 220.01869 * 9 8 6 12 12 N 1.46500 * 109.47191 * 185.00569 * 11 9 8 13 13 C 1.38604 * 120.00311 * 180.02562 * 12 11 9 14 14 N 1.29690 * 124.95326 * 180.30188 * 13 12 11 15 15 C 1.32127 * 116.86535 * 180.20561 * 14 13 12 16 16 C 1.50699 * 122.70853 * 179.79813 * 15 14 13 17 17 O 1.42892 * 109.47249 * 149.71069 * 16 15 14 18 18 Si 1.86298 * 109.47032 * 29.70455 * 16 15 14 19 19 C 1.33327 * 114.57736 * 359.52840 * 15 14 13 20 20 C 1.50703 * 125.94578 * 180.26819 * 19 15 14 21 21 S 1.70973 * 124.94625 * 0.02562 * 13 12 11 22 22 C 1.53773 * 87.08269 * 334.56971 * 9 8 6 23 23 H 1.09003 * 109.47128 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.47084 * 299.99978 * 1 2 3 25 25 H 1.08997 * 109.47098 * 60.00246 * 1 2 3 26 26 H 1.09008 * 109.47356 * 239.99932 * 2 1 3 27 27 H 1.08998 * 109.47509 * 120.00099 * 2 1 3 28 28 H 1.09002 * 113.61291 * 25.52639 * 8 6 4 29 29 H 1.08999 * 113.69436 * 254.62324 * 8 6 4 30 30 H 1.08995 * 109.47059 * 64.99978 * 11 9 8 31 31 H 1.09002 * 109.46893 * 305.00264 * 11 9 8 32 32 H 0.97007 * 119.99664 * 359.97438 * 12 11 9 33 33 H 1.09004 * 109.46453 * 269.71138 * 16 15 14 34 34 H 0.96703 * 114.00176 * 299.99748 * 17 16 15 35 35 H 1.48506 * 109.99834 * 58.68765 * 18 16 15 36 36 H 1.48502 * 110.00011 * 180.02562 * 18 16 15 37 37 H 1.09001 * 109.46908 * 89.99877 * 20 19 15 38 38 H 1.09001 * 109.46600 * 209.99645 * 20 19 15 39 39 H 1.08990 * 109.47386 * 329.99671 * 20 19 15 40 40 H 1.09000 * 113.61651 * 139.97940 * 22 9 8 41 41 H 1.09004 * 113.61572 * 270.87872 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 -0.0005 5 8 4.0807 0.5867 -0.0015 6 6 3.9206 2.9375 -0.0012 7 1 3.4713 3.5816 0.7547 8 6 5.4581 2.9682 -0.0011 9 6 5.3563 4.1436 -0.9875 10 9 5.2850 5.3939 -0.3639 11 6 6.3984 4.0965 -2.1067 12 7 6.2980 5.3116 -2.9190 13 6 7.1464 5.4950 -3.9995 14 7 7.1451 6.5327 -4.7775 15 6 8.0227 6.5396 -5.7651 16 6 8.1325 7.6759 -6.7489 17 8 9.4835 7.7853 -7.2015 18 14 7.6242 9.2655 -5.9210 19 6 8.8071 5.4628 -5.8175 20 6 9.8943 5.2086 -6.8298 21 16 8.3517 4.3892 -4.4971 22 6 3.9862 3.5784 -1.3974 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 1.8933 -0.5139 -0.8900 27 1 1.8933 -0.5138 0.8899 28 1 5.9127 2.0756 -0.4310 29 1 5.8908 3.2420 0.9612 30 1 6.2183 3.2238 -2.7344 31 1 7.3959 4.0316 -1.6719 32 1 5.6372 5.9874 -2.7009 33 1 7.4787 7.4841 -7.5998 34 1 10.1221 7.9563 -6.4957 35 1 8.4877 9.5219 -4.7404 36 1 7.7274 10.3938 -6.8810 37 1 10.8366 5.6130 -6.4602 38 1 9.9974 4.1354 -6.9903 39 1 9.6350 5.6935 -7.7708 40 1 3.2291 4.3451 -1.5619 41 1 4.0383 2.8527 -2.2091 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15509218_15704122.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 04:39:31 Heat of formation + Delta-G solvation = -89.012050 kcal Electronic energy + Delta-G solvation = -25778.337765 eV Core-core repulsion = 21702.338031 eV Total energy + Delta-G solvation = -4075.999734 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.109 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -49.10064 -41.85158 -41.03073 -39.55330 -38.11154 -37.52324 -36.54708 -32.98437 -32.74459 -30.38381 -28.83346 -27.40865 -26.41444 -25.50858 -24.21338 -23.86279 -22.23322 -21.02894 -20.59630 -19.23855 -18.96752 -18.09467 -17.86466 -17.75440 -17.41652 -17.24848 -16.76659 -16.61067 -16.07795 -15.75064 -15.66423 -15.54143 -15.22652 -14.70692 -14.67967 -14.38555 -14.14296 -13.96479 -13.83456 -13.74305 -13.64325 -13.33595 -13.12179 -13.04347 -12.77404 -12.75095 -12.60011 -12.34456 -12.05350 -11.81351 -11.74757 -11.60868 -11.42294 -11.17038 -10.60986 -10.46489 -10.01079 -8.67679 -4.64678 0.00844 0.14641 0.76196 1.01692 1.39862 1.47289 1.73720 1.85228 1.96272 2.13173 2.62825 2.73500 2.88636 3.06260 3.18305 3.31120 3.53600 3.69272 3.86202 3.88230 3.91916 4.00316 4.15001 4.17903 4.20969 4.21572 4.27851 4.34756 4.46748 4.55177 4.58717 4.64390 4.73396 4.75795 4.88574 4.89287 4.95225 5.07739 5.28340 5.35859 5.43628 6.17796 6.38109 6.61834 6.92948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.354 6.354 4 C 0.474 3.526 5 O -0.503 6.503 6 C -0.109 4.109 7 H 0.135 0.865 8 C -0.129 4.129 9 C 0.089 3.911 10 F -0.176 7.176 11 C 0.115 3.885 12 N -0.692 5.692 13 C 0.320 3.680 14 N -0.536 5.536 15 C 0.069 3.931 16 C -0.042 4.042 17 O -0.526 6.526 18 Si 0.721 3.279 19 C -0.239 4.239 20 C -0.066 4.066 21 S 0.100 5.900 22 C -0.135 4.135 23 H 0.082 0.918 24 H 0.068 0.932 25 H 0.068 0.932 26 H 0.072 0.928 27 H 0.072 0.928 28 H 0.120 0.880 29 H 0.100 0.900 30 H 0.091 0.909 31 H 0.084 0.916 32 H 0.418 0.582 33 H 0.125 0.875 34 H 0.376 0.624 35 H -0.268 1.268 36 H -0.261 1.261 37 H 0.069 0.931 38 H 0.060 0.940 39 H 0.092 0.908 40 H 0.102 0.898 41 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.987 -2.773 1.642 4.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.271 6.271 4 C 0.316 3.684 5 O -0.390 6.390 6 C -0.128 4.128 7 H 0.153 0.847 8 C -0.167 4.167 9 C 0.070 3.930 10 F -0.156 7.156 11 C -0.010 4.010 12 N -0.334 5.334 13 C -0.051 4.051 14 N -0.262 5.262 15 C -0.061 4.061 16 C -0.154 4.154 17 O -0.331 6.331 18 Si 0.621 3.379 19 C -0.362 4.362 20 C -0.125 4.125 21 S 0.348 5.652 22 C -0.173 4.173 23 H 0.101 0.899 24 H 0.087 0.913 25 H 0.087 0.913 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.139 0.861 29 H 0.119 0.881 30 H 0.109 0.891 31 H 0.102 0.898 32 H 0.257 0.743 33 H 0.142 0.858 34 H 0.224 0.776 35 H -0.192 1.192 36 H -0.186 1.186 37 H 0.087 0.913 38 H 0.079 0.921 39 H 0.111 0.889 40 H 0.120 0.880 41 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -2.852 -3.099 1.916 4.627 hybrid contribution 0.786 0.391 -0.052 0.879 sum -2.067 -2.708 1.864 3.883 Atomic orbital electron populations 1.21827 0.92223 1.03351 1.03732 1.23118 0.95707 0.79622 1.02834 1.86516 1.24111 1.32959 1.83536 1.23274 0.80858 0.91927 0.72317 1.90696 1.60526 1.42774 1.44996 1.22476 0.97051 0.91905 1.01360 0.84746 1.23603 0.93911 0.98112 1.01098 1.21852 0.96778 0.81301 0.93078 1.92924 1.97098 1.42185 1.83386 1.21974 0.99859 0.87782 0.91363 1.43627 1.38399 1.23267 1.28156 1.23182 0.95336 0.93689 0.92908 1.65715 1.27673 1.24668 1.08175 1.20104 0.93374 0.97090 0.95542 1.24461 0.86895 1.03796 1.00286 1.86604 1.15757 1.93385 1.37391 0.93611 0.92571 0.73634 0.78051 1.25114 1.08604 0.98045 1.04447 1.20216 0.94166 1.01584 0.96578 1.83991 1.31148 1.23368 1.26656 1.23630 0.96633 1.01140 0.95858 0.89924 0.91307 0.91318 0.91009 0.90988 0.86140 0.88139 0.89113 0.89751 0.74322 0.85752 0.77624 1.19226 1.18609 0.91271 0.92103 0.88932 0.87982 0.87219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.36 10.29 37.15 0.38 0.75 16 2 C 0.06 -0.04 6.19 37.15 0.23 0.19 16 3 O -0.35 -0.16 10.22 -39.25 -0.40 -0.56 16 4 C 0.47 0.17 7.49 36.01 0.27 0.44 16 5 O -0.50 -1.50 15.65 -18.75 -0.29 -1.79 16 6 C -0.11 0.26 4.24 -90.96 -0.39 -0.12 16 7 H 0.13 -0.45 8.14 -51.93 -0.42 -0.88 16 8 C -0.13 0.39 6.86 -25.92 -0.18 0.21 16 9 C 0.09 -0.26 1.74 -89.81 -0.16 -0.42 16 10 F -0.18 0.15 16.58 2.25 0.04 0.19 16 11 C 0.12 -0.33 5.28 -4.04 -0.02 -0.35 16 12 N -0.69 0.57 5.61 -62.30 -0.35 0.22 16 13 C 0.32 0.43 8.24 -87.68 -0.72 -0.29 16 14 N -0.54 -1.43 8.94 -11.36 -0.10 -1.53 16 15 C 0.07 0.16 5.92 -84.18 -0.50 -0.34 16 16 C -0.04 -0.05 2.82 36.01 0.10 0.05 16 17 O -0.53 -0.57 9.90 -35.23 -0.35 -0.92 16 18 Si 0.72 1.00 32.08 -169.99 -5.45 -4.45 16 19 C -0.24 -0.40 6.50 -36.02 -0.23 -0.63 16 20 C -0.07 -0.01 8.95 36.01 0.32 0.31 16 21 S 0.10 0.06 22.32 -107.50 -2.40 -2.34 16 22 C -0.13 0.47 7.08 -25.92 -0.18 0.29 16 23 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 24 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 25 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.07 -0.06 8.13 -51.92 -0.42 -0.48 16 27 H 0.07 -0.04 8.13 -51.93 -0.42 -0.47 16 28 H 0.12 -0.35 7.39 -51.93 -0.38 -0.74 16 29 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 30 H 0.09 -0.35 7.84 -51.93 -0.41 -0.76 16 31 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.42 -0.44 8.15 -40.82 -0.33 -0.78 16 33 H 0.12 0.04 7.96 -51.93 -0.41 -0.37 16 34 H 0.38 -0.44 8.68 45.56 0.40 -0.05 16 35 H -0.27 -1.14 7.11 56.52 0.40 -0.73 16 36 H -0.26 -0.94 7.11 56.52 0.40 -0.54 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.09 0.06 6.61 -51.93 -0.34 -0.28 16 40 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 41 H 0.11 -0.43 7.85 -51.93 -0.41 -0.84 16 LS Contribution 361.14 15.07 5.44 5.44 Total: 0.00 -6.94 361.14 -10.68 -17.62 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -5.74 Total: -11.95 kcal Atomic # 6 Polarization: 1.15 SS G_CDS: -1.07 Total: 0.08 kcal Atomic # 7 Polarization: -0.86 SS G_CDS: -0.45 Total: -1.31 kcal Atomic # 8 Polarization: -2.23 SS G_CDS: -1.04 Total: -3.28 kcal Atomic # 9 Polarization: 0.15 SS G_CDS: 0.04 Total: 0.19 kcal Atomic # 14 Polarization: 1.00 SS G_CDS: -5.45 Total: -4.45 kcal Atomic # 16 Polarization: 0.06 SS G_CDS: -2.40 Total: -2.34 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -6.94 -10.68 -17.62 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15509218_15704122.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.393 kcal (2) G-P(sol) polarization free energy of solvation -6.938 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.619 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.012 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds