Wall clock time and date at job start Mon Mar 8 2021 05:19:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.39144 * 110.99967 * 2 1 4 4 N 1.32343 * 119.71551 * 236.02490 * 3 2 1 5 5 C 1.32008 * 121.64098 * 179.68315 * 4 3 2 6 6 C 1.37982 * 120.90206 * 0.62523 * 5 4 3 7 7 C 1.50699 * 120.32332 * 179.68380 * 6 5 4 8 8 O 1.42903 * 109.47152 * 244.72813 * 7 6 5 9 9 Si 1.86305 * 109.47184 * 4.72285 * 7 6 5 10 10 C 1.38903 * 119.34945 * 359.41138 * 6 5 4 11 11 C 1.38441 * 118.48245 * 0.27069 * 10 6 5 12 12 F 1.35096 * 120.47143 * 180.02562 * 11 10 6 13 13 C 1.46897 * 110.99913 * 236.04310 * 2 1 3 14 14 H 1.08998 * 109.47370 * 178.95473 * 13 2 1 15 15 C 1.53004 * 109.47168 * 298.95186 * 13 2 1 16 16 C 1.52996 * 109.47091 * 179.97438 * 15 13 2 17 17 C 1.53006 * 109.47304 * 300.00431 * 16 15 13 18 18 H 1.09002 * 109.46979 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.46809 * 299.99739 * 17 16 15 20 20 C 1.53003 * 109.47030 * 59.99782 * 17 16 15 21 21 C 1.52996 * 109.47079 * 58.95609 * 13 2 1 22 22 H 1.08994 * 109.47412 * 60.00142 * 1 2 3 23 23 H 1.08998 * 109.47143 * 180.02562 * 1 2 3 24 24 H 1.09006 * 109.47019 * 299.99873 * 1 2 3 25 25 H 1.08005 * 119.54357 * 180.33569 * 5 4 3 26 26 H 1.08997 * 109.47198 * 124.72491 * 7 6 5 27 27 H 0.96700 * 114.00311 * 180.02562 * 8 7 6 28 28 H 1.48499 * 109.99670 * 178.68093 * 9 7 6 29 29 H 1.48497 * 110.00233 * 300.00062 * 9 7 6 30 30 H 1.07998 * 120.75510 * 180.25095 * 10 6 5 31 31 H 1.08996 * 109.47337 * 300.00425 * 15 13 2 32 32 H 1.09003 * 109.46567 * 60.00360 * 15 13 2 33 33 H 1.09003 * 109.46953 * 60.00017 * 16 15 13 34 34 H 1.08999 * 109.47315 * 180.02562 * 16 15 13 35 35 H 0.96696 * 113.99641 * 180.02562 * 19 17 16 36 36 H 1.08998 * 109.46946 * 60.00361 * 20 17 16 37 37 H 1.08996 * 109.46968 * 179.97438 * 20 17 16 38 38 H 1.09008 * 109.47185 * 299.99618 * 21 13 2 39 39 H 1.08999 * 109.47255 * 59.99614 * 21 13 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9676 1.2990 0.0000 4 7 2.8024 1.6813 -0.9532 5 6 3.2935 2.9059 -0.9934 6 6 2.9615 3.8347 -0.0285 7 6 3.5354 5.2271 -0.0832 8 8 4.3747 5.4413 1.0533 9 14 4.5374 5.4250 -1.6412 10 6 2.0886 3.4754 0.9905 11 6 1.5841 2.1862 1.0038 12 9 0.7319 1.7940 1.9758 13 6 1.9954 -0.7660 -1.1375 14 1 3.0848 -0.7343 -1.1240 15 6 1.5263 -2.2188 -1.0350 16 6 2.0740 -3.0164 -2.2201 17 6 1.5618 -2.4060 -3.5262 18 1 1.9524 -2.9740 -4.3705 19 8 0.1335 -2.4476 -3.5434 20 6 2.0310 -0.9533 -3.6287 21 6 1.4837 -0.1558 -2.4439 22 1 -0.3634 0.5138 -0.8899 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5138 0.8900 25 1 3.9681 3.1833 -1.7900 26 1 2.7240 5.9549 -0.0781 27 1 4.7788 6.3193 1.0840 28 1 5.0826 6.8039 -1.7227 29 1 5.6470 4.4382 -1.6604 30 1 1.8101 4.1854 1.7551 31 1 1.8908 -2.6535 -0.1043 32 1 0.4368 -2.2505 -1.0486 33 1 3.1635 -2.9846 -2.2070 34 1 1.7394 -4.0512 -2.1473 35 1 -0.2612 -2.0765 -4.3444 36 1 3.1204 -0.9216 -3.6156 37 1 1.6664 -0.5185 -4.5594 38 1 0.3942 -0.1876 -2.4575 39 1 1.8179 0.8791 -2.5169 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15557738_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:19:04 Heat of formation + Delta-G solvation = -61.543346 kcal Electronic energy + Delta-G solvation = -23577.599718 eV Core-core repulsion = 20016.084821 eV Total energy + Delta-G solvation = -3561.514896 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -49.93160 -41.97499 -40.32633 -38.47147 -37.55298 -35.02154 -33.56779 -31.94709 -31.71847 -29.70252 -28.03478 -25.84241 -24.98362 -23.72710 -23.00872 -22.06198 -20.42055 -18.89776 -18.61100 -18.46025 -18.01754 -17.73165 -16.91798 -16.81461 -16.21637 -15.87488 -15.79794 -15.66452 -15.30868 -15.03218 -14.54611 -14.44329 -14.29236 -14.09556 -13.92361 -13.63308 -13.17564 -13.04509 -13.01611 -12.68439 -12.52987 -12.28111 -12.05238 -11.97937 -11.43000 -11.19132 -10.98433 -10.90370 -10.63057 -10.48632 -10.33275 -9.05400 -5.10242 -0.21279 0.00169 1.11135 1.46846 1.82975 2.25644 2.45074 3.08829 3.11375 3.25865 3.35294 3.56676 3.74198 3.76696 3.80618 3.98692 4.02666 4.12217 4.15485 4.24344 4.32400 4.36771 4.48189 4.52594 4.58037 4.61155 4.63246 4.79389 4.87172 4.90825 4.96810 5.04491 5.12328 5.21647 5.24001 5.31000 5.42074 5.55496 5.68514 6.06202 6.29740 6.72867 6.73418 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 N -0.470 5.470 3 C 0.297 3.703 4 N -0.482 5.482 5 C 0.121 3.879 6 C -0.129 4.129 7 C -0.068 4.068 8 O -0.535 6.535 9 Si 0.682 3.318 10 C -0.059 4.059 11 C 0.033 3.967 12 F -0.122 7.122 13 C 0.097 3.903 14 H 0.093 0.907 15 C -0.113 4.113 16 C -0.109 4.109 17 C 0.102 3.898 18 H 0.054 0.946 19 O -0.564 6.564 20 C -0.144 4.144 21 C -0.145 4.145 22 H 0.046 0.954 23 H 0.091 0.909 24 H 0.086 0.914 25 H 0.164 0.836 26 H 0.081 0.919 27 H 0.383 0.617 28 H -0.256 1.256 29 H -0.250 1.250 30 H 0.151 0.849 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.076 0.924 34 H 0.073 0.927 35 H 0.376 0.624 36 H 0.074 0.926 37 H 0.064 0.936 38 H 0.064 0.936 39 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.921 2.750 -4.234 5.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 N -0.185 5.185 3 C 0.064 3.936 4 N -0.195 5.195 5 C -0.036 4.036 6 C -0.132 4.132 7 C -0.178 4.178 8 O -0.343 6.343 9 Si 0.582 3.418 10 C -0.086 4.086 11 C 0.009 3.991 12 F -0.100 7.100 13 C -0.010 4.010 14 H 0.111 0.889 15 C -0.151 4.151 16 C -0.147 4.147 17 C 0.043 3.957 18 H 0.072 0.928 19 O -0.369 6.369 20 C -0.182 4.182 21 C -0.184 4.184 22 H 0.064 0.936 23 H 0.109 0.891 24 H 0.104 0.896 25 H 0.181 0.819 26 H 0.099 0.901 27 H 0.231 0.769 28 H -0.181 1.181 29 H -0.175 1.175 30 H 0.169 0.831 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.095 0.905 34 H 0.091 0.909 35 H 0.222 0.778 36 H 0.092 0.908 37 H 0.083 0.917 38 H 0.083 0.917 39 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.098 1.102 -4.011 4.161 hybrid contribution -0.132 1.823 0.716 1.963 sum -0.034 2.925 -3.296 4.407 Atomic orbital electron populations 1.22784 0.83635 1.04603 1.02695 1.59345 1.09640 1.07202 1.42281 1.20056 0.94102 0.89508 0.89960 1.67880 1.12082 1.17730 1.21825 1.22473 0.96251 0.87654 0.97236 1.19978 0.99756 0.96332 0.97138 1.24632 0.98595 0.95336 0.99265 1.86597 1.65456 1.38917 1.43316 0.95143 0.83672 0.81026 0.81962 1.21382 0.94694 0.94313 0.98212 1.18078 0.97036 0.93972 0.90008 1.91479 1.67400 1.90962 1.60175 1.21697 1.00456 0.92241 0.86622 0.88920 1.21596 1.02006 0.93284 0.98235 1.21505 1.00390 0.99719 0.93106 1.21827 0.81159 0.94942 0.97794 0.92764 1.86512 1.19538 1.85385 1.45504 1.22131 1.01820 0.95775 0.98505 1.22183 1.00850 1.01148 0.94196 0.93567 0.89084 0.89550 0.81920 0.90125 0.76878 1.18067 1.17450 0.83149 0.91233 0.90608 0.90495 0.90877 0.77760 0.90781 0.91708 0.91708 0.89458 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 8.41 60.06 0.51 0.51 16 2 N -0.47 -1.08 4.74 -173.34 -0.82 -1.90 16 3 C 0.30 0.83 6.04 -154.85 -0.93 -0.11 16 4 N -0.48 -1.04 6.48 -12.36 -0.08 -1.12 16 5 C 0.12 0.08 9.83 -17.57 -0.17 -0.09 16 6 C -0.13 -0.07 5.39 -104.47 -0.56 -0.64 16 7 C -0.07 0.09 2.81 36.01 0.10 0.19 16 8 O -0.54 -0.10 12.82 -35.23 -0.45 -0.55 16 9 Si 0.68 -1.47 29.87 -169.99 -5.08 -6.55 16 10 C -0.06 -0.08 9.82 -39.26 -0.39 -0.47 16 11 C 0.03 0.09 7.00 -39.10 -0.27 -0.18 16 12 F -0.12 -0.40 14.80 2.25 0.03 -0.37 16 13 C 0.10 0.13 1.86 -67.71 -0.13 0.00 16 14 H 0.09 0.22 7.75 -51.93 -0.40 -0.18 16 15 C -0.11 -0.09 4.86 -26.73 -0.13 -0.22 16 16 C -0.11 0.00 5.66 -26.73 -0.15 -0.15 16 17 C 0.10 -0.05 3.77 -26.73 -0.10 -0.15 16 18 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 19 O -0.56 -0.14 11.97 -35.23 -0.42 -0.57 16 20 C -0.14 0.12 5.63 -26.76 -0.15 -0.03 16 21 C -0.15 -0.06 4.30 -26.76 -0.12 -0.18 16 22 H 0.05 0.03 6.51 -51.93 -0.34 -0.31 16 23 H 0.09 0.03 6.13 -51.93 -0.32 -0.29 16 24 H 0.09 0.10 5.73 -51.93 -0.30 -0.19 16 25 H 0.16 -0.25 4.87 -52.48 -0.26 -0.50 16 26 H 0.08 -0.25 7.96 -51.93 -0.41 -0.67 16 27 H 0.38 -1.47 8.74 45.56 0.40 -1.07 16 28 H -0.26 0.04 7.11 56.52 0.40 0.44 16 29 H -0.25 -0.22 7.06 56.52 0.40 0.17 16 30 H 0.15 0.00 8.06 -52.49 -0.42 -0.42 16 31 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 32 H 0.08 0.12 5.88 -51.93 -0.31 -0.19 16 33 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.38 -1.16 9.08 45.56 0.41 -0.75 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 38 H 0.06 0.06 6.01 -51.92 -0.31 -0.25 16 39 H 0.09 0.10 5.65 -51.93 -0.29 -0.19 16 LS Contribution 301.46 15.07 4.54 4.54 Total: 0.00 -6.08 301.46 -9.06 -15.13 By element: Atomic # 1 Polarization: -2.83 SS G_CDS: -4.28 Total: -7.11 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -2.50 Total: -1.51 kcal Atomic # 7 Polarization: -2.12 SS G_CDS: -0.90 Total: -3.02 kcal Atomic # 8 Polarization: -0.24 SS G_CDS: -0.87 Total: -1.12 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.03 Total: -0.37 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.08 Total: -6.55 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -6.08 -9.06 -15.13 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15557738_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.411 kcal (2) G-P(sol) polarization free energy of solvation -6.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.133 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds