Wall clock time and date at job start Mon Mar 8 2021 06:48:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86303 * 109.46928 * 2 1 4 4 C 1.50707 * 109.47161 * 240.00380 * 2 1 3 5 5 C 1.38601 * 120.71759 * 299.99869 * 4 2 1 6 6 N 1.32282 * 119.19485 * 179.97438 * 5 4 2 7 7 C 1.32488 * 120.73685 * 359.97438 * 6 5 4 8 8 N 1.38406 * 119.21530 * 179.97438 * 7 6 5 9 9 C 1.46497 * 120.00405 * 180.02562 * 8 7 6 10 10 H 1.09002 * 112.90477 * 336.25221 * 9 8 7 11 11 C 1.53779 * 113.61581 * 107.50394 * 9 8 7 12 12 C 1.53779 * 87.08402 * 139.98450 * 11 9 8 13 13 H 1.08997 * 113.61646 * 220.02209 * 12 11 9 14 14 N 1.46497 * 113.69123 * 89.12592 * 12 11 9 15 15 C 1.36891 * 126.39507 * 142.18304 * 14 12 11 16 16 C 1.34667 * 106.81267 * 179.84158 * 15 14 12 17 17 N 1.34121 * 108.02279 * 0.42210 * 16 15 14 18 18 C 1.30494 * 109.26134 * 359.73107 * 17 16 15 19 19 C 1.53784 * 113.61569 * 205.00175 * 9 8 7 20 20 N 1.32489 * 121.57244 * 0.28019 * 7 6 5 21 21 C 1.32284 * 120.73758 * 359.43942 * 20 7 6 22 22 H 0.96700 * 114.00624 * 59.99418 * 1 2 3 23 23 H 1.08995 * 109.47266 * 120.00245 * 2 1 3 24 24 H 1.48503 * 109.99772 * 60.00532 * 3 2 1 25 25 H 1.48503 * 109.99727 * 181.31907 * 3 2 1 26 26 H 1.08002 * 120.40386 * 359.95694 * 5 4 2 27 27 H 0.97009 * 120.00061 * 0.02562 * 8 7 6 28 28 H 1.09006 * 113.61307 * 25.43652 * 11 9 8 29 29 H 1.09007 * 113.61642 * 254.53409 * 11 9 8 30 30 H 1.07997 * 126.59042 * 359.97438 * 15 14 12 31 31 H 1.08003 * 125.98618 * 180.12090 * 16 15 14 32 32 H 1.08004 * 125.65980 * 180.02562 * 18 17 16 33 33 H 1.09004 * 113.61451 * 105.47149 * 19 9 8 34 34 H 1.08994 * 113.61477 * 334.56451 * 19 9 8 35 35 H 1.07994 * 120.40175 * 180.25803 * 21 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.6056 -2.0370 -1.4647 6 7 2.0626 -2.6309 -2.5549 7 6 2.8224 -1.9717 -3.4171 8 7 3.2838 -2.6241 -4.5473 9 6 4.1256 -1.9120 -5.5118 10 1 3.9902 -0.8310 -5.4762 11 6 5.5995 -2.3495 -5.4842 12 6 5.5767 -2.2482 -7.0185 13 1 6.1219 -3.0496 -7.5172 14 7 5.9281 -0.9196 -7.5260 15 6 6.6679 -0.6471 -8.6450 16 6 6.7460 0.6937 -8.7434 17 7 6.0802 1.2252 -7.7075 18 6 5.5875 0.2649 -6.9741 19 6 4.0610 -2.4943 -6.9337 20 7 3.1560 -0.7047 -3.2204 21 6 2.7278 -0.0506 -2.1533 22 1 -0.3934 0.4418 -0.7650 23 1 1.7923 -0.5138 0.8899 24 1 1.5614 2.4678 1.2086 25 1 3.5345 1.7703 -0.0321 26 1 0.9866 -2.5795 -0.7655 27 1 3.0498 -3.5530 -4.7007 28 1 5.7467 -3.3648 -5.1158 29 1 6.2611 -1.6255 -5.0086 30 1 7.1033 -1.3687 -9.3204 31 1 7.2594 1.2444 -9.5178 32 1 5.0038 0.3956 -6.0748 33 1 3.4806 -1.8871 -7.6283 34 1 3.7877 -3.5491 -6.9616 35 1 2.9997 0.9833 -2.0005 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15607998_12175864.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:04 Heat of formation + Delta-G solvation = 136.475694 kcal Electronic energy + Delta-G solvation = -20478.456022 eV Core-core repulsion = 17288.245508 eV Total energy + Delta-G solvation = -3190.210514 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.117 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -43.24183 -42.14771 -40.25341 -38.10984 -35.94211 -34.76369 -33.24835 -31.87439 -30.20224 -27.28033 -27.15990 -26.12231 -25.42902 -23.31290 -22.48066 -21.98315 -21.13339 -19.47821 -18.94230 -18.16358 -17.92368 -16.93132 -16.66645 -16.30477 -16.22901 -15.85161 -15.72498 -15.48724 -15.23740 -14.78618 -14.64161 -14.14363 -14.07233 -13.81100 -13.79146 -13.36653 -13.01500 -12.54689 -12.23102 -12.01074 -11.90944 -11.81091 -11.40802 -10.83937 -10.63737 -10.53792 -10.08681 -9.42293 -9.22508 -5.13112 -0.01054 0.08931 1.09029 1.19321 1.53174 1.66649 1.67729 1.90088 2.31774 2.72132 2.88897 3.06550 3.14721 3.34863 3.42221 3.54403 3.57451 3.62366 3.65762 3.83258 3.88477 4.10460 4.15993 4.23205 4.26689 4.44140 4.50548 4.55070 4.62075 4.65747 4.76637 4.85329 5.16454 5.32732 5.65877 5.84181 5.89534 6.24181 6.28482 6.47472 7.19486 7.19942 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.046 4.046 3 Si 0.681 3.319 4 C -0.291 4.291 5 C 0.223 3.777 6 N -0.568 5.568 7 C 0.566 3.434 8 N -0.685 5.685 9 C 0.136 3.864 10 H 0.125 0.875 11 C -0.159 4.159 12 C 0.110 3.890 13 H 0.120 0.880 14 N -0.445 5.445 15 C -0.054 4.054 16 C -0.029 4.029 17 N -0.491 5.491 18 C 0.180 3.820 19 C -0.154 4.154 20 N -0.563 5.563 21 C 0.199 3.801 22 H 0.380 0.620 23 H 0.116 0.884 24 H -0.250 1.250 25 H -0.255 1.255 26 H 0.171 0.829 27 H 0.416 0.584 28 H 0.107 0.893 29 H 0.086 0.914 30 H 0.175 0.825 31 H 0.171 0.829 32 H 0.204 0.796 33 H 0.088 0.912 34 H 0.108 0.892 35 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.647 -2.636 -1.525 3.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.159 4.159 3 Si 0.583 3.417 4 C -0.299 4.299 5 C 0.055 3.945 6 N -0.289 5.289 7 C 0.210 3.790 8 N -0.321 5.321 9 C 0.030 3.970 10 H 0.142 0.858 11 C -0.199 4.199 12 C 0.005 3.995 13 H 0.138 0.862 14 N -0.129 5.129 15 C -0.186 4.186 16 C -0.176 4.176 17 N -0.209 5.209 18 C -0.102 4.102 19 C -0.193 4.193 20 N -0.285 5.285 21 C 0.032 3.968 22 H 0.227 0.773 23 H 0.133 0.867 24 H -0.174 1.174 25 H -0.179 1.179 26 H 0.188 0.812 27 H 0.255 0.745 28 H 0.125 0.875 29 H 0.104 0.896 30 H 0.192 0.808 31 H 0.188 0.812 32 H 0.220 0.780 33 H 0.107 0.893 34 H 0.127 0.873 35 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 0.262 -2.023 -1.314 2.427 hybrid contribution -0.147 -1.522 0.680 1.673 sum 0.115 -3.545 -0.635 3.604 Atomic orbital electron populations 1.86509 1.17074 1.81614 1.49341 1.24705 0.85154 1.09639 0.96372 0.94936 0.81068 0.77701 0.88025 1.21745 1.07736 0.98448 1.01988 1.22853 0.90201 0.90598 0.90824 1.67992 1.16001 1.39263 1.05641 1.19403 0.86819 0.85697 0.87100 1.44087 1.53937 1.14385 1.19648 1.22790 0.88863 0.98647 0.86728 0.85769 1.23989 0.98028 1.04356 0.93530 1.22086 0.97387 0.83452 0.96569 0.86222 1.45296 1.39919 1.06667 1.20990 1.22766 1.03715 0.98758 0.93350 1.22381 1.04240 0.91381 0.99623 1.70351 1.13394 1.31383 1.05761 1.25126 1.04042 0.79488 1.01577 1.23860 0.95023 1.03575 0.96847 1.67871 1.28185 1.08509 1.23915 1.22815 0.88425 0.98851 0.86708 0.77305 0.86653 1.17438 1.17937 0.81155 0.74549 0.87495 0.89557 0.80796 0.81199 0.77953 0.89348 0.87345 0.81554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.63 12.79 -35.23 -0.45 0.18 16 2 C -0.05 0.08 2.85 36.01 0.10 0.18 16 3 Si 0.68 -1.48 29.87 -169.99 -5.08 -6.56 16 4 C -0.29 0.21 5.40 -104.35 -0.56 -0.35 16 5 C 0.22 0.07 10.92 -17.22 -0.19 -0.12 16 6 N -0.57 -1.02 10.46 -13.93 -0.15 -1.17 16 7 C 0.57 0.75 8.42 -322.82 -2.72 -1.97 16 8 N -0.68 0.81 5.50 -55.01 -0.30 0.50 16 9 C 0.14 -0.31 3.74 -67.12 -0.25 -0.57 16 10 H 0.12 -0.14 4.87 -51.93 -0.25 -0.40 16 11 C -0.16 0.46 7.30 -25.92 -0.19 0.27 16 12 C 0.11 -0.34 4.87 -67.12 -0.33 -0.66 16 13 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 14 N -0.45 0.09 2.94 -110.59 -0.33 -0.23 16 15 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 16 C -0.03 -0.07 11.87 -17.82 -0.21 -0.28 16 17 N -0.49 -2.16 11.25 -14.67 -0.16 -2.33 16 18 C 0.18 0.30 11.20 -90.38 -1.01 -0.72 16 19 C -0.15 0.57 7.54 -25.91 -0.20 0.37 16 20 N -0.56 -0.65 9.13 -13.93 -0.13 -0.77 16 21 C 0.20 -0.08 9.92 -17.22 -0.17 -0.25 16 22 H 0.38 -1.80 8.70 45.56 0.40 -1.41 16 23 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 24 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 25 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 26 H 0.17 -0.22 8.06 -52.49 -0.42 -0.64 16 27 H 0.42 -1.03 8.84 -40.82 -0.36 -1.39 16 28 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 29 H 0.09 -0.12 8.03 -51.93 -0.42 -0.54 16 30 H 0.17 -0.46 8.06 -52.49 -0.42 -0.88 16 31 H 0.17 0.08 8.06 -52.48 -0.42 -0.34 16 32 H 0.20 -0.06 5.86 -52.48 -0.31 -0.36 16 33 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.11 -0.57 8.12 -51.93 -0.42 -0.99 16 35 H 0.17 -0.45 5.04 -52.49 -0.26 -0.72 16 LS Contribution 297.81 15.07 4.49 4.49 Total: 0.00 -8.61 297.81 -11.80 -20.41 By element: Atomic # 1 Polarization: -6.45 SS G_CDS: -3.78 Total: -10.22 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -5.92 Total: -4.30 kcal Atomic # 7 Polarization: -2.93 SS G_CDS: -1.07 Total: -4.00 kcal Atomic # 8 Polarization: 0.63 SS G_CDS: -0.45 Total: 0.18 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.08 Total: -6.56 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -8.61 -11.80 -20.41 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15607998_12175864.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 156.886 kcal (2) G-P(sol) polarization free energy of solvation -8.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 148.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.411 kcal (6) G-S(sol) free energy of system = (1) + (5) 136.476 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds