Wall clock time and date at job start Mon Mar 8 2021 06:48:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86297 * 109.46878 * 2 1 4 4 C 1.50700 * 109.47285 * 240.00001 * 2 1 3 5 5 C 1.33328 * 125.95341 * 300.02701 * 4 2 1 6 6 N 1.32114 * 114.58139 * 179.75565 * 5 4 2 7 7 C 1.29696 * 116.86485 * 0.46392 * 6 5 4 8 8 N 1.38606 * 124.94803 * 179.81481 * 7 6 5 9 9 C 1.46498 * 120.00185 * 359.70473 * 8 7 6 10 10 H 1.09000 * 112.84860 * 336.19432 * 9 8 7 11 11 C 1.54046 * 113.69915 * 107.46379 * 9 8 7 12 12 C 1.53777 * 86.98822 * 139.98946 * 11 9 8 13 13 H 1.08999 * 113.61845 * 219.97997 * 12 11 9 14 14 N 1.46499 * 113.61475 * 89.16275 * 12 11 9 15 15 C 1.36887 * 126.39910 * 140.86669 * 14 12 11 16 16 C 1.34672 * 106.81700 * 179.97438 * 15 14 12 17 17 N 1.34127 * 108.01948 * 0.22851 * 16 15 14 18 18 C 1.30502 * 109.25683 * 359.61488 * 17 16 15 19 19 C 1.53775 * 87.17265 * 334.57057 * 12 11 9 20 20 S 1.70965 * 110.09868 * 359.55683 * 7 6 5 21 21 H 0.96700 * 114.00418 * 59.99958 * 1 2 3 22 22 H 1.08997 * 109.46825 * 120.00029 * 2 1 3 23 23 H 1.48496 * 110.00221 * 298.68066 * 3 2 1 24 24 H 1.48497 * 110.00034 * 59.99876 * 3 2 1 25 25 H 1.08000 * 122.70665 * 359.97438 * 5 4 2 26 26 H 0.96996 * 119.99667 * 179.69533 * 8 7 6 27 27 H 1.08997 * 113.61539 * 25.48284 * 11 9 8 28 28 H 1.09008 * 113.69913 * 254.50545 * 11 9 8 29 29 H 1.07997 * 126.58796 * 359.97438 * 15 14 12 30 30 H 1.08002 * 125.98510 * 179.97438 * 16 15 14 31 31 H 1.08003 * 125.64479 * 180.14464 * 18 17 16 32 32 H 1.09008 * 113.61814 * 140.01927 * 19 12 11 33 33 H 1.08993 * 113.61801 * 270.84288 * 19 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.6831 -1.9787 -1.5583 6 7 2.2336 -2.3707 -2.6935 7 6 2.9429 -1.4941 -3.3344 8 7 3.5960 -1.7255 -4.5348 9 6 3.5179 -3.0437 -5.1691 10 1 3.2980 -3.8421 -4.4603 11 6 2.6296 -3.0738 -6.4273 12 6 3.6888 -3.9958 -7.0541 13 1 3.8850 -3.7842 -8.1052 14 7 3.4561 -5.4186 -6.7941 15 6 3.6477 -6.4475 -7.6764 16 6 3.3153 -7.5816 -7.0306 17 7 2.9265 -7.2535 -5.7895 18 6 3.0131 -5.9601 -5.6391 19 6 4.7053 -3.3527 -6.0961 20 16 2.9489 -0.0097 -2.4863 21 1 -0.3934 0.4417 -0.7650 22 1 1.7923 -0.5138 0.8900 23 1 1.5878 2.4586 -1.2242 24 1 1.5613 2.4679 1.2084 25 1 1.0779 -2.6317 -0.9471 26 1 4.1047 -1.0145 -4.9550 27 1 2.5431 -2.1073 -6.9239 28 1 1.6657 -3.5585 -6.2717 29 1 3.9980 -6.3655 -8.6947 30 1 3.3513 -8.5797 -7.4415 31 1 2.7671 -5.4131 -4.7409 32 1 5.4163 -4.0625 -5.6731 33 1 5.1864 -2.4632 -6.5027 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15607998_15704118.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:09 Heat of formation + Delta-G solvation = 126.523129 kcal Electronic energy + Delta-G solvation = -18886.075811 eV Core-core repulsion = 15850.011878 eV Total energy + Delta-G solvation = -3036.063933 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.078 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -43.23506 -40.95882 -40.01552 -38.01583 -35.77497 -32.96415 -31.22863 -30.19840 -27.28790 -27.11553 -26.10071 -24.41320 -22.64414 -22.22509 -21.22110 -20.76153 -19.74804 -18.43101 -17.94629 -17.28007 -16.85248 -16.51328 -16.24318 -15.95607 -15.76750 -15.45557 -15.28559 -14.97457 -14.77659 -14.08449 -13.90752 -13.82125 -13.79775 -13.23582 -12.91940 -12.53981 -12.39773 -12.07052 -11.99531 -11.29859 -10.95260 -10.83075 -10.54061 -10.31918 -10.24873 -9.42040 -8.84946 -5.09568 -0.10410 -0.03950 0.63018 1.08895 1.20768 1.51737 1.66802 1.87409 1.95815 1.99086 2.32273 2.87436 3.10485 3.30284 3.38701 3.50433 3.57383 3.80986 3.86075 3.89624 4.08849 4.21201 4.23031 4.48517 4.50758 4.54431 4.61618 4.68794 4.72378 4.83444 5.07678 5.32366 5.68632 5.84543 5.90412 6.24287 6.32469 6.92029 7.20284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.018 4.018 3 Si 0.654 3.346 4 C -0.302 4.302 5 C 0.119 3.881 6 N -0.549 5.549 7 C 0.321 3.679 8 N -0.682 5.682 9 C 0.136 3.864 10 H 0.122 0.878 11 C -0.159 4.159 12 C 0.110 3.890 13 H 0.120 0.880 14 N -0.445 5.445 15 C -0.054 4.054 16 C -0.029 4.029 17 N -0.491 5.491 18 C 0.180 3.820 19 C -0.154 4.154 20 S 0.093 5.907 21 H 0.377 0.623 22 H 0.126 0.874 23 H -0.244 1.244 24 H -0.237 1.237 25 H 0.177 0.823 26 H 0.416 0.584 27 H 0.107 0.893 28 H 0.086 0.914 29 H 0.175 0.825 30 H 0.171 0.829 31 H 0.204 0.796 32 H 0.088 0.912 33 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.139 4.863 -3.549 7.307 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.131 4.131 3 Si 0.553 3.447 4 C -0.425 4.425 5 C -0.032 4.032 6 N -0.274 5.274 7 C -0.049 4.049 8 N -0.321 5.321 9 C 0.029 3.971 10 H 0.140 0.860 11 C -0.199 4.199 12 C 0.005 3.995 13 H 0.138 0.862 14 N -0.129 5.129 15 C -0.186 4.186 16 C -0.176 4.176 17 N -0.209 5.209 18 C -0.102 4.102 19 C -0.193 4.193 20 S 0.342 5.658 21 H 0.225 0.775 22 H 0.144 0.856 23 H -0.168 1.168 24 H -0.160 1.160 25 H 0.194 0.806 26 H 0.254 0.746 27 H 0.125 0.875 28 H 0.105 0.895 29 H 0.192 0.808 30 H 0.188 0.812 31 H 0.220 0.780 32 H 0.107 0.893 33 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 4.146 5.271 -2.870 7.294 hybrid contribution -1.031 0.088 -0.952 1.406 sum 3.116 5.358 -3.822 7.282 Atomic orbital electron populations 1.86624 1.17441 1.79885 1.49216 1.24089 0.83501 1.09798 0.95705 0.95232 0.91626 0.75229 0.82598 1.25558 1.13062 0.99209 1.04659 1.21341 0.97173 0.93106 0.91603 1.66461 1.16772 1.33671 1.10454 1.23769 0.95198 0.93649 0.92275 1.43958 1.54648 1.13970 1.19546 1.22877 0.95580 0.85618 0.93065 0.86021 1.24033 0.98958 1.00260 0.96652 1.22085 0.98126 0.78164 1.01114 0.86223 1.45292 1.49261 1.06347 1.11999 1.22762 1.10678 0.87497 0.97684 1.22391 1.05225 0.98685 0.91314 1.70363 1.20058 1.11464 1.18969 1.25131 1.03214 0.90309 0.91529 1.23856 0.97216 1.02010 0.96247 1.84012 1.51222 1.13343 1.17217 0.77543 0.85638 1.16783 1.16038 0.80564 0.74642 0.87504 0.89540 0.80775 0.81184 0.78007 0.89324 0.87361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.42 12.87 -35.23 -0.45 -0.87 16 2 C -0.02 0.01 2.99 36.01 0.11 0.12 16 3 Si 0.65 -0.67 31.05 -169.99 -5.28 -5.95 16 4 C -0.30 -0.03 5.74 -36.02 -0.21 -0.24 16 5 C 0.12 0.15 11.22 -19.15 -0.21 -0.06 16 6 N -0.55 -1.06 9.83 -15.21 -0.15 -1.21 16 7 C 0.32 0.02 8.09 -87.68 -0.71 -0.69 16 8 N -0.68 1.73 5.52 -54.86 -0.30 1.43 16 9 C 0.14 -0.36 3.86 -66.98 -0.26 -0.61 16 10 H 0.12 -0.09 5.11 -51.93 -0.27 -0.36 16 11 C -0.16 0.50 7.33 -25.78 -0.19 0.31 16 12 C 0.11 -0.35 4.87 -67.12 -0.33 -0.68 16 13 H 0.12 -0.58 8.14 -51.93 -0.42 -1.00 16 14 N -0.45 0.02 2.94 -110.60 -0.33 -0.30 16 15 C -0.05 -0.03 11.58 -16.56 -0.19 -0.22 16 16 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 17 N -0.49 -2.42 11.25 -14.66 -0.16 -2.58 16 18 C 0.18 0.38 11.24 -90.38 -1.02 -0.63 16 19 C -0.15 0.63 7.52 -25.92 -0.19 0.44 16 20 S 0.09 -0.08 20.57 -107.50 -2.21 -2.30 16 21 H 0.38 -0.69 8.70 45.56 0.40 -0.29 16 22 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 23 H -0.24 -0.20 7.11 56.52 0.40 0.21 16 24 H -0.24 -0.41 7.11 56.52 0.40 -0.01 16 25 H 0.18 0.07 8.06 -52.49 -0.42 -0.36 16 26 H 0.42 -2.04 8.85 -40.82 -0.36 -2.40 16 27 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 28 H 0.09 -0.11 8.06 -51.92 -0.42 -0.53 16 29 H 0.18 -0.45 8.06 -52.49 -0.42 -0.87 16 30 H 0.17 0.13 8.06 -52.49 -0.42 -0.29 16 31 H 0.20 0.11 5.80 -52.48 -0.30 -0.20 16 32 H 0.09 -0.24 8.14 -51.92 -0.42 -0.66 16 33 H 0.11 -0.66 8.12 -51.93 -0.42 -1.08 16 LS Contribution 295.77 15.07 4.46 4.46 Total: 0.00 -7.87 295.77 -11.36 -19.23 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -3.52 Total: -9.33 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -3.41 Total: -2.57 kcal Atomic # 7 Polarization: -1.73 SS G_CDS: -0.94 Total: -2.67 kcal Atomic # 8 Polarization: -0.42 SS G_CDS: -0.45 Total: -0.87 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.28 Total: -5.95 kcal Atomic # 16 Polarization: -0.08 SS G_CDS: -2.21 Total: -2.30 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -7.87 -11.36 -19.23 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15607998_15704118.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.755 kcal (2) G-P(sol) polarization free energy of solvation -7.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 137.887 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.364 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.232 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds