Wall clock time and date at job start Mon Mar 8 2021 06:48:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33323 * 125.95019 * 2 1 4 4 C 1.50703 * 122.71322 * 0.02562 * 3 2 1 5 5 O 1.42890 * 109.47542 * 113.27552 * 4 3 2 6 6 Si 1.86307 * 109.46777 * 233.27937 * 4 3 2 7 7 N 1.32119 * 114.57876 * 179.74572 * 3 2 1 8 8 C 1.29685 * 116.86617 * 0.25289 * 7 3 2 9 9 N 1.38613 * 124.95303 * 180.02562 * 8 7 3 10 10 C 1.46501 * 120.00128 * 179.97438 * 9 8 7 11 11 H 1.08992 * 112.85105 * 25.33119 * 10 9 8 12 12 C 1.53780 * 113.61073 * 156.53109 * 10 9 8 13 13 C 1.53778 * 87.08168 * 139.97868 * 12 10 9 14 14 H 1.09003 * 113.61671 * 220.01474 * 13 12 10 15 15 N 1.46498 * 113.61664 * 89.19610 * 13 12 10 16 16 C 1.36884 * 126.40002 * 119.71071 * 15 13 12 17 17 C 1.34668 * 106.81900 * 179.84164 * 16 15 13 18 18 N 1.34130 * 108.01975 * 0.42649 * 17 16 15 19 19 C 1.30501 * 109.25608 * 359.73107 * 18 17 16 20 20 C 1.53783 * 113.60952 * 254.13348 * 10 9 8 21 21 S 1.70966 * 110.10007 * 359.97438 * 8 7 3 22 22 H 1.09003 * 109.47051 * 84.91768 * 1 2 3 23 23 H 1.09002 * 109.47559 * 204.91450 * 1 2 3 24 24 H 1.09003 * 109.47842 * 324.92212 * 1 2 3 25 25 H 1.09003 * 109.46562 * 353.27524 * 4 3 2 26 26 H 0.96701 * 114.00536 * 179.97438 * 5 4 3 27 27 H 1.48497 * 109.99758 * 178.67840 * 6 4 3 28 28 H 1.48501 * 109.99824 * 299.99349 * 6 4 3 29 29 H 0.96999 * 119.99581 * 359.97438 * 9 8 7 30 30 H 1.09003 * 113.60994 * 254.52307 * 12 10 9 31 31 H 1.09000 * 113.62185 * 25.42993 * 12 10 9 32 32 H 1.08001 * 126.58665 * 359.97438 * 16 15 13 33 33 H 1.08004 * 125.99146 * 180.11602 * 17 16 15 34 34 H 1.08002 * 125.64592 * 179.97438 * 19 18 17 35 35 H 1.08999 * 113.61861 * 334.56643 * 20 10 9 36 36 H 1.09004 * 113.61258 * 105.47754 * 20 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2897 1.0793 0.0000 4 6 1.7414 2.4830 0.0006 5 8 2.0643 3.1201 1.2381 6 14 2.4932 3.4439 -1.4074 7 7 3.5849 0.8188 0.0053 8 6 3.9314 -0.4309 0.0047 9 7 5.2384 -0.8927 0.0103 10 6 5.5064 -2.3329 0.0095 11 1 4.6934 -2.9145 -0.4249 12 6 6.8925 -2.7012 -0.5456 13 6 6.9758 -3.7505 0.5754 14 1 7.9625 -3.8235 1.0328 15 7 6.4249 -5.0551 0.2002 16 6 7.1021 -6.2443 0.1694 17 6 6.2216 -7.1840 -0.2247 18 7 5.0414 -6.5833 -0.4381 19 6 5.1557 -5.3081 -0.1856 20 6 5.9914 -2.8699 1.3665 21 16 2.5412 -1.4260 -0.0025 22 1 -0.3633 0.0910 -1.0236 23 1 -0.3634 -0.9320 0.4329 24 1 -0.3635 0.8410 0.5906 25 1 0.6585 2.4500 -0.1194 26 1 1.7421 4.0291 1.3085 27 1 1.9368 4.8203 -1.4372 28 1 3.9695 3.4961 -1.2555 29 1 5.9754 -0.2621 0.0147 30 1 6.8615 -3.1327 -1.5461 31 1 7.6274 -1.9018 -0.4509 32 1 8.1420 -6.3995 0.4161 33 1 6.4304 -8.2360 -0.3520 34 1 4.3661 -4.5762 -0.2714 35 1 6.4795 -2.1167 1.9850 36 1 5.2341 -3.4374 1.9074 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15607998_15704122.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:11 Heat of formation + Delta-G solvation = 123.720550 kcal Electronic energy + Delta-G solvation = -20824.500087 eV Core-core repulsion = 17632.777007 eV Total energy + Delta-G solvation = -3191.723080 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.094 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -43.32004 -41.03798 -40.32036 -37.68340 -35.96679 -33.49183 -32.38608 -30.29430 -29.12865 -27.30880 -26.49307 -25.56364 -24.24704 -22.71026 -22.19013 -21.33355 -20.12038 -19.27194 -18.51972 -18.07046 -17.54418 -17.11108 -16.43273 -16.04770 -15.93128 -15.68040 -15.50461 -15.23689 -14.85620 -14.45580 -14.11119 -13.98690 -13.91382 -13.88048 -13.73451 -13.50458 -13.28370 -12.97995 -12.54452 -12.30437 -12.12399 -11.73493 -11.14839 -10.91315 -10.61762 -10.55951 -10.42656 -9.98477 -9.49867 -8.68225 -4.88323 -0.02137 0.15965 0.73179 1.00854 1.31362 1.58454 1.70010 1.79042 1.87025 2.23089 2.24504 2.76371 2.98261 3.23730 3.34438 3.41405 3.58720 3.69789 3.80513 3.92259 4.02475 4.09354 4.16488 4.19487 4.37667 4.41753 4.46536 4.51081 4.60547 4.64143 4.75681 4.89642 4.89780 5.18842 5.24302 5.49450 5.77454 6.15180 6.20039 6.46472 6.98058 7.11601 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 C -0.240 4.240 3 C 0.117 3.883 4 C -0.039 4.039 5 O -0.529 6.529 6 Si 0.695 3.305 7 N -0.531 5.531 8 C 0.313 3.687 9 N -0.684 5.684 10 C 0.124 3.876 11 H 0.110 0.890 12 C -0.147 4.147 13 C 0.110 3.890 14 H 0.123 0.877 15 N -0.445 5.445 16 C -0.050 4.050 17 C -0.028 4.028 18 N -0.488 5.488 19 C 0.175 3.825 20 C -0.160 4.160 21 S 0.104 5.896 22 H 0.078 0.922 23 H 0.070 0.930 24 H 0.078 0.922 25 H 0.081 0.919 26 H 0.379 0.621 27 H -0.260 1.260 28 H -0.247 1.247 29 H 0.414 0.586 30 H 0.091 0.909 31 H 0.112 0.888 32 H 0.176 0.824 33 H 0.172 0.828 34 H 0.199 0.801 35 H 0.113 0.887 36 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.013 0.434 -1.014 1.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.131 4.131 2 C -0.363 4.363 3 C -0.014 4.014 4 C -0.151 4.151 5 O -0.336 6.336 6 Si 0.594 3.406 7 N -0.256 5.256 8 C -0.059 4.059 9 N -0.324 5.324 10 C 0.018 3.982 11 H 0.128 0.872 12 C -0.187 4.187 13 C 0.005 3.995 14 H 0.141 0.859 15 N -0.129 5.129 16 C -0.182 4.182 17 C -0.175 4.175 18 N -0.205 5.205 19 C -0.107 4.107 20 C -0.200 4.200 21 S 0.353 5.647 22 H 0.096 0.904 23 H 0.089 0.911 24 H 0.096 0.904 25 H 0.099 0.901 26 H 0.227 0.773 27 H -0.185 1.185 28 H -0.171 1.171 29 H 0.253 0.747 30 H 0.109 0.891 31 H 0.131 0.869 32 H 0.193 0.807 33 H 0.189 0.811 34 H 0.215 0.785 35 H 0.131 0.869 36 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 1.383 -0.582 -1.363 2.027 hybrid contribution 0.645 2.122 1.364 2.604 sum 2.028 1.540 0.001 2.546 Atomic orbital electron populations 1.20207 0.86638 1.03292 1.02984 1.25068 1.01152 0.92982 1.17136 1.18798 0.86501 0.94544 1.01539 1.24270 1.02031 0.92933 0.95825 1.86628 1.81451 1.31106 1.34382 0.94768 0.81897 0.79525 0.84418 1.66064 1.17546 1.16354 1.25623 1.23325 0.91833 0.91559 0.99138 1.43827 1.02000 1.06057 1.80541 1.22871 0.98123 0.80254 0.96936 0.87246 1.23800 0.96641 0.98449 0.99764 1.22145 0.99225 0.80676 0.97476 0.85906 1.45297 1.10352 1.07296 1.49970 1.22789 1.00050 0.84822 1.10588 1.22402 0.89263 1.00039 1.05835 1.70354 1.25471 1.04541 1.20165 1.24975 0.86874 0.95077 1.03727 1.24080 0.99226 0.99042 0.97657 1.83869 0.96560 1.10251 1.74005 0.90386 0.91135 0.90356 0.90102 0.77268 1.18546 1.17072 0.74699 0.89055 0.86929 0.80662 0.81075 0.78492 0.86895 0.89302 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 0.08 9.71 36.00 0.35 0.43 16 2 C -0.24 -0.38 6.57 -36.03 -0.24 -0.61 16 3 C 0.12 0.36 5.22 -84.18 -0.44 -0.08 16 4 C -0.04 -0.05 2.83 36.01 0.10 0.05 16 5 O -0.53 -1.42 12.86 -35.23 -0.45 -1.87 16 6 Si 0.69 0.61 32.62 -169.99 -5.54 -4.93 16 7 N -0.53 -2.24 9.77 -11.36 -0.11 -2.35 16 8 C 0.31 0.59 8.24 -87.68 -0.72 -0.13 16 9 N -0.68 0.67 5.52 -54.99 -0.30 0.37 16 10 C 0.12 -0.37 3.69 -67.12 -0.25 -0.61 16 11 H 0.11 -0.29 4.61 -51.93 -0.24 -0.52 16 12 C -0.15 0.62 7.54 -25.92 -0.20 0.42 16 13 C 0.11 -0.40 4.88 -67.03 -0.33 -0.73 16 14 H 0.12 -0.63 8.14 -51.93 -0.42 -1.05 16 15 N -0.45 0.38 2.94 -110.49 -0.33 0.06 16 16 C -0.05 0.01 11.58 -16.56 -0.19 -0.18 16 17 C -0.03 -0.05 11.87 -17.81 -0.21 -0.26 16 18 N -0.49 -1.85 11.25 -14.66 -0.16 -2.02 16 19 C 0.18 0.16 11.20 -90.37 -1.01 -0.85 16 20 C -0.16 0.56 7.31 -25.82 -0.19 0.37 16 21 S 0.10 0.07 21.71 -107.50 -2.33 -2.27 16 22 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 23 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 24 H 0.08 -0.12 7.17 -51.93 -0.37 -0.49 16 25 H 0.08 -0.10 6.34 -51.93 -0.33 -0.43 16 26 H 0.38 -0.69 8.74 45.56 0.40 -0.29 16 27 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 28 H -0.25 -1.26 7.11 56.52 0.40 -0.86 16 29 H 0.41 -0.70 8.84 -40.82 -0.36 -1.06 16 30 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.11 -0.63 8.11 -51.93 -0.42 -1.05 16 32 H 0.18 -0.56 8.06 -52.49 -0.42 -0.98 16 33 H 0.17 0.00 8.06 -52.48 -0.42 -0.43 16 34 H 0.20 -0.27 5.86 -52.49 -0.31 -0.58 16 35 H 0.11 -0.46 8.14 -51.93 -0.42 -0.88 16 36 H 0.09 -0.22 8.03 -51.93 -0.42 -0.64 16 LS Contribution 316.05 15.07 4.76 4.76 Total: 0.00 -9.67 316.05 -12.00 -21.67 By element: Atomic # 1 Polarization: -7.03 SS G_CDS: -4.21 Total: -11.24 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: -3.32 Total: -2.18 kcal Atomic # 7 Polarization: -3.04 SS G_CDS: -0.90 Total: -3.94 kcal Atomic # 8 Polarization: -1.42 SS G_CDS: -0.45 Total: -1.87 kcal Atomic # 14 Polarization: 0.61 SS G_CDS: -5.54 Total: -4.93 kcal Atomic # 16 Polarization: 0.07 SS G_CDS: -2.33 Total: -2.27 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -9.67 -12.00 -21.67 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15607998_15704122.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 145.391 kcal (2) G-P(sol) polarization free energy of solvation -9.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 135.722 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.001 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.670 kcal (6) G-S(sol) free energy of system = (1) + (5) 123.721 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds