Wall clock time and date at job start Mon Mar 8 2021 06:48:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47365 * 2 1 4 4 C 1.50701 * 109.47277 * 120.00128 * 2 1 3 5 5 C 1.37979 * 120.32543 * 245.00183 * 4 2 1 6 6 N 1.32015 * 120.90060 * 180.02562 * 5 4 2 7 7 C 1.32336 * 121.64509 * 359.97438 * 6 5 4 8 8 N 1.39139 * 119.71648 * 179.97438 * 7 6 5 9 9 C 1.46501 * 119.99943 * 359.97438 * 8 7 6 10 10 H 1.08993 * 112.90929 * 336.25239 * 9 8 7 11 11 C 1.53962 * 113.66387 * 107.55451 * 9 8 7 12 12 C 1.53782 * 87.11063 * 139.88885 * 11 9 8 13 13 H 1.09001 * 113.61250 * 220.08565 * 12 11 9 14 14 N 1.46501 * 113.61142 * 89.18830 * 12 11 9 15 15 C 1.36878 * 126.39568 * 142.21580 * 14 12 11 16 16 C 1.34671 * 106.81828 * 179.83981 * 15 14 12 17 17 N 1.34124 * 108.01699 * 0.41717 * 16 15 14 18 18 C 1.30502 * 109.25647 * 359.73752 * 17 16 15 19 19 C 1.53781 * 87.08260 * 334.63747 * 12 11 9 20 20 C 1.39340 * 120.56435 * 0.25992 * 7 6 5 21 21 F 1.35101 * 120.47595 * 179.72067 * 20 7 6 22 22 C 1.38453 * 119.05607 * 359.49131 * 20 7 6 23 23 H 0.96703 * 113.99846 * 300.00178 * 1 2 3 24 24 H 1.09007 * 109.46927 * 240.00117 * 2 1 3 25 25 H 1.48497 * 109.99973 * 178.68219 * 3 2 1 26 26 H 1.48506 * 109.99695 * 300.00135 * 3 2 1 27 27 H 1.07998 * 119.55180 * 0.04175 * 5 4 2 28 28 H 0.97002 * 120.00260 * 180.02562 * 8 7 6 29 29 H 1.08997 * 113.53543 * 25.33559 * 11 9 8 30 30 H 1.08998 * 113.73879 * 254.47157 * 11 9 8 31 31 H 1.08007 * 126.59153 * 359.97438 * 15 14 12 32 32 H 1.07999 * 125.99236 * 180.12061 * 16 15 14 33 33 H 1.07999 * 125.64663 * 180.02562 * 18 17 16 34 34 H 1.09002 * 113.61445 * 139.98212 * 19 12 11 35 35 H 1.09002 * 113.61408 * 270.79943 * 19 12 11 36 36 H 1.07997 * 120.75691 * 180.24221 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6381 -0.0202 2.1937 6 7 3.0839 -0.6313 3.2757 7 6 2.8731 -1.9215 3.4810 8 7 3.3616 -2.5250 4.6355 9 6 4.1063 -1.7327 5.6174 10 1 4.5643 -0.8431 5.1852 11 6 3.3200 -1.4548 6.9116 12 6 4.6348 -1.6995 7.6707 13 1 4.5068 -2.2622 8.5954 14 7 5.4449 -0.4915 7.8457 15 6 6.1821 -0.1610 8.9506 16 6 6.7686 1.0226 8.6880 17 7 6.3921 1.4086 7.4599 18 6 5.5991 0.5067 6.9494 19 6 5.0709 -2.5662 6.4775 20 6 2.1712 -2.6820 2.5480 21 9 1.9618 -4.0003 2.7567 22 6 1.6871 -2.0665 1.4062 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5139 -0.8901 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.8290 1.0345 2.0609 28 1 3.2098 -3.4705 4.7900 29 1 2.5501 -2.1974 7.1210 30 1 2.9537 -0.4313 6.9913 31 1 6.2772 -0.7394 9.8578 32 1 7.4231 1.5677 9.3519 33 1 5.1423 0.5510 5.9718 34 1 6.1188 -2.4395 6.2058 35 1 4.7809 -3.6129 6.5691 36 1 1.1361 -2.6288 0.6669 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15607998_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:14 Heat of formation + Delta-G solvation = 74.028825 kcal Electronic energy + Delta-G solvation = -22696.903819 eV Core-core repulsion = 19099.957341 eV Total energy + Delta-G solvation = -3596.946478 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.95364 -43.22775 -41.53190 -40.16833 -38.03432 -35.90012 -33.41812 -32.98089 -31.20446 -30.18689 -27.21518 -27.07827 -26.05063 -24.65708 -23.06574 -22.45809 -21.93970 -21.12407 -19.41599 -18.77356 -18.41707 -17.94923 -17.63420 -17.05679 -16.81645 -16.27577 -16.18538 -16.06707 -15.63441 -15.42785 -15.35016 -14.91572 -14.75472 -14.37053 -14.12254 -13.97171 -13.79554 -13.77108 -13.60233 -13.13824 -12.64573 -12.52942 -12.11441 -11.96935 -11.39061 -10.83524 -10.76789 -10.76136 -10.53157 -10.51600 -9.41804 -8.89957 -5.11330 -0.15465 0.02989 1.09631 1.19037 1.56529 1.67996 1.80488 1.91866 2.32176 2.45110 2.90350 2.96263 3.13203 3.17403 3.35554 3.43234 3.52460 3.58693 3.74930 3.77032 3.86104 3.93796 4.12798 4.24102 4.27201 4.34020 4.38996 4.51704 4.55805 4.62130 4.63745 4.77255 4.86715 4.90395 5.28415 5.33478 5.78262 5.85010 6.03000 6.24961 6.48167 6.82848 7.20166 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.055 4.055 3 Si 0.683 3.317 4 C -0.206 4.206 5 C 0.150 3.850 6 N -0.512 5.512 7 C 0.389 3.611 8 N -0.706 5.706 9 C 0.133 3.867 10 H 0.124 0.876 11 C -0.159 4.159 12 C 0.110 3.890 13 H 0.119 0.881 14 N -0.445 5.445 15 C -0.054 4.054 16 C -0.029 4.029 17 N -0.491 5.491 18 C 0.180 3.820 19 C -0.156 4.156 20 C -0.018 4.018 21 F -0.133 7.133 22 C -0.037 4.037 23 H 0.380 0.620 24 H 0.116 0.884 25 H -0.253 1.253 26 H -0.251 1.251 27 H 0.165 0.835 28 H 0.414 0.586 29 H 0.106 0.894 30 H 0.087 0.913 31 H 0.175 0.825 32 H 0.171 0.829 33 H 0.204 0.796 34 H 0.087 0.913 35 H 0.107 0.893 36 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.998 -2.078 2.640 3.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.167 4.167 3 Si 0.584 3.416 4 C -0.211 4.211 5 C -0.007 4.007 6 N -0.229 5.229 7 C 0.151 3.849 8 N -0.339 5.339 9 C 0.027 3.973 10 H 0.141 0.859 11 C -0.198 4.198 12 C 0.005 3.995 13 H 0.137 0.863 14 N -0.128 5.128 15 C -0.186 4.186 16 C -0.176 4.176 17 N -0.209 5.209 18 C -0.102 4.102 19 C -0.195 4.195 20 C -0.044 4.044 21 F -0.112 7.112 22 C -0.064 4.064 23 H 0.227 0.773 24 H 0.133 0.867 25 H -0.177 1.177 26 H -0.175 1.175 27 H 0.181 0.819 28 H 0.252 0.748 29 H 0.124 0.876 30 H 0.105 0.895 31 H 0.192 0.808 32 H 0.188 0.812 33 H 0.221 0.779 34 H 0.105 0.895 35 H 0.125 0.875 36 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.693 -0.649 2.008 2.221 hybrid contribution -0.728 -2.600 -0.215 2.709 sum -1.421 -3.249 1.793 3.974 Atomic orbital electron populations 1.86521 1.17012 1.81659 1.49317 1.24869 0.85271 1.09953 0.96585 0.94890 0.81287 0.77463 0.87926 1.20958 1.05448 0.94628 1.00112 1.22337 0.91607 0.99291 0.87505 1.67246 1.24876 1.07271 1.23492 1.18423 0.90615 0.89036 0.86853 1.44484 1.58907 1.11851 1.18643 1.22772 0.91935 0.95792 0.86775 0.85859 1.24004 0.96202 1.04561 0.95050 1.22092 0.92094 0.85196 1.00142 0.86300 1.45286 1.36257 1.17181 1.14096 1.22763 1.01557 1.00892 0.93418 1.22380 1.04538 0.95708 0.95004 1.70357 1.13523 1.27464 1.09565 1.25123 1.01589 0.85764 0.97741 1.23856 1.01398 0.99973 0.94270 1.17996 1.08580 0.79450 0.98406 1.91497 1.93724 1.31047 1.94941 1.21310 0.95440 0.94455 0.95147 0.77271 0.86680 1.17736 1.17509 0.81861 0.74839 0.87600 0.89482 0.80818 0.81212 0.77945 0.89484 0.87514 0.83248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.50 12.84 -35.23 -0.45 0.05 16 2 C -0.06 0.08 2.82 36.01 0.10 0.18 16 3 Si 0.68 -1.48 29.83 -169.99 -5.07 -6.55 16 4 C -0.21 0.19 5.36 -104.47 -0.56 -0.37 16 5 C 0.15 -0.14 9.83 -17.57 -0.17 -0.31 16 6 N -0.51 -0.21 9.13 -12.37 -0.11 -0.32 16 7 C 0.39 0.12 7.49 -154.86 -1.16 -1.04 16 8 N -0.71 1.19 5.51 -52.97 -0.29 0.89 16 9 C 0.13 -0.33 3.77 -67.02 -0.25 -0.58 16 10 H 0.12 -0.15 4.92 -51.93 -0.26 -0.41 16 11 C -0.16 0.50 7.31 -25.82 -0.19 0.31 16 12 C 0.11 -0.34 4.88 -67.12 -0.33 -0.66 16 13 H 0.12 -0.54 8.14 -51.93 -0.42 -0.96 16 14 N -0.44 0.09 2.94 -110.59 -0.33 -0.23 16 15 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 16 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 17 N -0.49 -2.17 11.25 -14.67 -0.17 -2.34 16 18 C 0.18 0.29 11.19 -90.38 -1.01 -0.72 16 19 C -0.16 0.55 7.53 -25.92 -0.20 0.35 16 20 C -0.02 -0.01 7.35 -39.09 -0.29 -0.30 16 21 F -0.13 -0.16 16.65 2.25 0.04 -0.13 16 22 C -0.04 0.00 9.82 -39.26 -0.39 -0.38 16 23 H 0.38 -1.80 8.70 45.56 0.40 -1.40 16 24 H 0.12 -0.13 7.96 -51.93 -0.41 -0.55 16 25 H -0.25 -0.05 7.11 56.52 0.40 0.35 16 26 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 27 H 0.16 -0.52 4.91 -52.49 -0.26 -0.78 16 28 H 0.41 -1.20 8.20 -40.82 -0.33 -1.53 16 29 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 30 H 0.09 -0.16 8.02 -51.93 -0.42 -0.58 16 31 H 0.17 -0.45 8.06 -52.48 -0.42 -0.87 16 32 H 0.17 0.09 8.06 -52.49 -0.42 -0.34 16 33 H 0.20 -0.07 5.87 -52.49 -0.31 -0.38 16 34 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 35 H 0.11 -0.54 8.12 -51.93 -0.42 -0.96 16 36 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 LS Contribution 308.46 15.07 4.65 4.65 Total: 0.00 -7.99 308.46 -10.32 -18.31 By element: Atomic # 1 Polarization: -6.58 SS G_CDS: -3.74 Total: -10.33 kcal Atomic # 6 Polarization: 0.85 SS G_CDS: -4.84 Total: -4.00 kcal Atomic # 7 Polarization: -1.10 SS G_CDS: -0.90 Total: -2.00 kcal Atomic # 8 Polarization: 0.50 SS G_CDS: -0.45 Total: 0.05 kcal Atomic # 9 Polarization: -0.16 SS G_CDS: 0.04 Total: -0.13 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.07 Total: -6.55 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -7.99 -10.32 -18.31 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15607998_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.337 kcal (2) G-P(sol) polarization free energy of solvation -7.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.320 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.308 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.029 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds