Wall clock time and date at job start Mon Mar 8 2021 06:48:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86301 * 109.47365 * 2 1 4 4 C 1.50701 * 109.47277 * 120.00128 * 2 1 3 5 5 C 1.37979 * 120.32543 * 245.00183 * 4 2 1 6 6 N 1.32015 * 120.90060 * 180.02562 * 5 4 2 7 7 C 1.32336 * 121.64509 * 359.97438 * 6 5 4 8 8 N 1.39139 * 119.71648 * 179.97438 * 7 6 5 9 9 C 1.46501 * 119.99943 * 359.97438 * 8 7 6 10 10 H 1.08993 * 112.90929 * 336.25239 * 9 8 7 11 11 C 1.53962 * 113.66387 * 107.55451 * 9 8 7 12 12 C 1.53782 * 87.11063 * 139.88885 * 11 9 8 13 13 H 1.09001 * 113.61250 * 220.08565 * 12 11 9 14 14 N 1.46501 * 113.61142 * 89.18830 * 12 11 9 15 15 C 1.36878 * 126.39568 * 142.21580 * 14 12 11 16 16 C 1.34671 * 106.81828 * 179.83981 * 15 14 12 17 17 N 1.34124 * 108.01699 * 0.41717 * 16 15 14 18 18 C 1.30502 * 109.25647 * 359.73752 * 17 16 15 19 19 C 1.53781 * 87.08260 * 334.63747 * 12 11 9 20 20 C 1.39340 * 120.56435 * 0.25992 * 7 6 5 21 21 F 1.35101 * 120.47595 * 179.72067 * 20 7 6 22 22 C 1.38453 * 119.05607 * 359.49131 * 20 7 6 23 23 H 0.96703 * 113.99846 * 300.00178 * 1 2 3 24 24 H 1.09007 * 109.46927 * 240.00117 * 2 1 3 25 25 H 1.48497 * 109.99973 * 178.68219 * 3 2 1 26 26 H 1.48506 * 109.99695 * 300.00135 * 3 2 1 27 27 H 1.07998 * 119.55180 * 0.04175 * 5 4 2 28 28 H 0.97002 * 120.00260 * 180.02562 * 8 7 6 29 29 H 1.08997 * 113.53543 * 25.33559 * 11 9 8 30 30 H 1.08998 * 113.73879 * 254.47157 * 11 9 8 31 31 H 1.08007 * 126.59153 * 359.97438 * 15 14 12 32 32 H 1.07999 * 125.99236 * 180.12061 * 16 15 14 33 33 H 1.07999 * 125.64663 * 180.02562 * 18 17 16 34 34 H 1.09002 * 113.61445 * 139.98212 * 19 12 11 35 35 H 1.09002 * 113.61408 * 270.79943 * 19 12 11 36 36 H 1.07997 * 120.75691 * 180.24221 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6381 -0.0202 2.1937 6 7 3.0839 -0.6313 3.2757 7 6 2.8731 -1.9215 3.4810 8 7 3.3616 -2.5250 4.6355 9 6 4.1063 -1.7327 5.6174 10 1 4.5643 -0.8431 5.1852 11 6 3.3200 -1.4548 6.9116 12 6 4.6348 -1.6995 7.6707 13 1 4.5068 -2.2622 8.5954 14 7 5.4449 -0.4915 7.8457 15 6 6.1821 -0.1610 8.9506 16 6 6.7686 1.0226 8.6880 17 7 6.3921 1.4086 7.4599 18 6 5.5991 0.5067 6.9494 19 6 5.0709 -2.5662 6.4775 20 6 2.1712 -2.6820 2.5480 21 9 1.9618 -4.0003 2.7567 22 6 1.6871 -2.0665 1.4062 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5139 -0.8901 25 1 3.5346 1.7702 0.0321 26 1 1.5615 2.4679 -1.2085 27 1 2.8290 1.0345 2.0609 28 1 3.2098 -3.4705 4.7900 29 1 2.5501 -2.1974 7.1210 30 1 2.9537 -0.4313 6.9913 31 1 6.2772 -0.7394 9.8578 32 1 7.4231 1.5677 9.3519 33 1 5.1423 0.5510 5.9718 34 1 6.1188 -2.4395 6.2058 35 1 4.7809 -3.6129 6.5691 36 1 1.1361 -2.6288 0.6669 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15607998_17656566.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:48:13 Heat of formation + Delta-G solvation = 76.377958 kcal Electronic energy + Delta-G solvation = -22696.801953 eV Core-core repulsion = 19099.957341 eV Total energy + Delta-G solvation = -3596.844612 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.112 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -49.97607 -43.21697 -41.46779 -40.02396 -37.93585 -35.79951 -33.38368 -32.96559 -31.13980 -30.21452 -27.05008 -26.88615 -25.94988 -24.60060 -23.01203 -22.43057 -21.93890 -21.03265 -19.34133 -18.67805 -18.36438 -17.82953 -17.55003 -17.04096 -16.66917 -16.21733 -16.13185 -15.97598 -15.53233 -15.39423 -15.31765 -14.86761 -14.76618 -14.34133 -14.09220 -13.90706 -13.67125 -13.55856 -13.52180 -12.97099 -12.54233 -12.38527 -12.15794 -11.76380 -11.26731 -10.92334 -10.73141 -10.71408 -10.54698 -10.42794 -9.46436 -8.80673 -4.98389 -0.11102 0.07306 1.08902 1.30769 1.65832 1.78137 1.93938 1.99780 2.21114 2.50336 2.99911 3.13629 3.25854 3.37153 3.48501 3.65134 3.66961 3.71115 3.84272 3.87810 3.98322 4.03462 4.30779 4.39424 4.43025 4.48601 4.59017 4.61156 4.70089 4.76511 4.78265 4.86426 4.96986 5.02128 5.33845 5.37855 5.82199 5.91361 6.15841 6.27133 6.78694 6.92032 7.13872 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.057 4.057 3 Si 0.769 3.231 4 C -0.205 4.205 5 C 0.148 3.852 6 N -0.526 5.526 7 C 0.382 3.618 8 N -0.700 5.700 9 C 0.128 3.872 10 H 0.109 0.891 11 C -0.149 4.149 12 C 0.108 3.892 13 H 0.144 0.856 14 N -0.441 5.441 15 C -0.043 4.043 16 C -0.063 4.063 17 N -0.538 5.538 18 C 0.172 3.828 19 C -0.145 4.145 20 C -0.034 4.034 21 F -0.139 7.139 22 C -0.042 4.042 23 H 0.396 0.604 24 H 0.111 0.889 25 H -0.282 1.282 26 H -0.297 1.297 27 H 0.183 0.817 28 H 0.420 0.580 29 H 0.121 0.879 30 H 0.073 0.927 31 H 0.206 0.794 32 H 0.177 0.823 33 H 0.214 0.786 34 H 0.074 0.926 35 H 0.129 0.871 36 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.488 -3.034 3.584 5.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.167 4.167 3 Si 0.675 3.325 4 C -0.210 4.210 5 C -0.009 4.009 6 N -0.243 5.243 7 C 0.143 3.857 8 N -0.333 5.333 9 C 0.022 3.978 10 H 0.127 0.873 11 C -0.188 4.188 12 C 0.004 3.996 13 H 0.161 0.839 14 N -0.123 5.123 15 C -0.176 4.176 16 C -0.210 4.210 17 N -0.257 5.257 18 C -0.110 4.110 19 C -0.183 4.183 20 C -0.061 4.061 21 F -0.118 7.118 22 C -0.068 4.068 23 H 0.246 0.754 24 H 0.129 0.871 25 H -0.209 1.209 26 H -0.225 1.225 27 H 0.200 0.800 28 H 0.258 0.742 29 H 0.139 0.861 30 H 0.092 0.908 31 H 0.222 0.778 32 H 0.194 0.806 33 H 0.230 0.770 34 H 0.092 0.908 35 H 0.147 0.853 36 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -1.203 -1.640 2.988 3.614 hybrid contribution -0.585 -2.297 -0.549 2.433 sum -1.788 -3.938 2.439 4.965 Atomic orbital electron populations 1.86484 1.17148 1.82114 1.50571 1.24943 0.85265 1.10362 0.96170 0.93884 0.78086 0.74999 0.85519 1.20976 1.05422 0.94345 1.00251 1.22672 0.90960 1.00145 0.87087 1.67309 1.25434 1.07443 1.24106 1.18581 0.90616 0.89112 0.87367 1.44532 1.58440 1.12167 1.18145 1.22803 0.92464 0.95641 0.86877 0.87305 1.23949 0.96378 1.04224 0.94296 1.22327 0.91543 0.84240 1.01459 0.83863 1.45454 1.35947 1.17499 1.13451 1.23217 1.00097 1.00182 0.94124 1.22697 1.06029 0.97221 0.95018 1.70280 1.15170 1.29327 1.10935 1.25282 1.01367 0.86012 0.98352 1.23827 1.00278 1.00906 0.93330 1.18110 1.09573 0.79339 0.99035 1.91473 1.93878 1.31456 1.95035 1.21449 0.95357 0.94912 0.95081 0.75383 0.87129 1.20891 1.22468 0.80033 0.74150 0.86119 0.90787 0.77767 0.80565 0.77015 0.90759 0.85323 0.82888 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.16 12.84 -148.98 -1.91 -0.75 16 2 C -0.06 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.77 -3.18 29.83 68.60 2.05 -1.13 16 4 C -0.20 0.37 5.36 -19.77 -0.11 0.26 16 5 C 0.15 -0.27 9.83 84.60 0.83 0.56 16 6 N -0.53 -0.57 9.13 -193.04 -1.76 -2.33 16 7 C 0.38 0.32 7.49 133.09 1.00 1.31 16 8 N -0.70 2.55 5.51 -321.50 -1.77 0.77 16 9 C 0.13 -0.67 3.77 45.58 0.17 -0.50 16 10 H 0.11 -0.21 4.92 -2.39 -0.01 -0.23 16 11 C -0.15 1.09 7.31 31.18 0.23 1.32 16 12 C 0.11 -0.82 4.88 45.52 0.22 -0.60 16 13 H 0.14 -1.72 8.14 -2.39 -0.02 -1.74 16 14 N -0.44 0.37 2.94 -503.80 -1.48 -1.11 16 15 C -0.04 0.00 11.58 83.09 0.96 0.96 16 16 C -0.06 -0.36 11.87 83.52 0.99 0.63 16 17 N -0.54 -5.55 11.25 -200.32 -2.25 -7.80 16 18 C 0.17 0.71 11.19 180.26 2.02 2.73 16 19 C -0.14 1.19 7.53 31.12 0.23 1.43 16 20 C -0.03 -0.06 7.35 22.59 0.17 0.11 16 21 F -0.14 -0.39 16.65 44.97 0.75 0.36 16 22 C -0.04 -0.01 9.82 22.48 0.22 0.21 16 23 H 0.40 -3.98 8.70 -74.06 -0.64 -4.62 16 24 H 0.11 -0.23 7.96 -2.38 -0.02 -0.25 16 25 H -0.28 -0.22 7.11 99.48 0.71 0.48 16 26 H -0.30 -1.11 7.11 99.48 0.71 -0.40 16 27 H 0.18 -1.22 4.91 -2.91 -0.01 -1.23 16 28 H 0.42 -2.69 8.20 -92.71 -0.76 -3.45 16 29 H 0.12 -1.20 8.14 -2.39 -0.02 -1.22 16 30 H 0.07 -0.29 8.02 -2.39 -0.02 -0.31 16 31 H 0.21 -1.47 8.06 -2.91 -0.02 -1.50 16 32 H 0.18 0.41 8.06 -2.91 -0.02 0.39 16 33 H 0.21 0.14 5.87 -2.91 -0.02 0.12 16 34 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 35 H 0.13 -1.60 8.12 -2.39 -0.02 -1.62 16 36 H 0.15 -0.18 8.06 -2.91 -0.02 -0.20 16 Total: 0.00 -19.90 308.46 0.53 -19.37 By element: Atomic # 1 Polarization: -15.94 SS G_CDS: -0.22 Total: -16.16 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: 7.14 Total: 8.79 kcal Atomic # 7 Polarization: -3.20 SS G_CDS: -7.27 Total: -10.47 kcal Atomic # 8 Polarization: 1.16 SS G_CDS: -1.91 Total: -0.75 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.75 Total: 0.36 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.05 Total: -1.13 kcal Total: -19.90 0.53 -19.37 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15607998_17656566.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.751 kcal (2) G-P(sol) polarization free energy of solvation -19.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 75.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.529 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.374 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.378 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds