Wall clock time and date at job start Mon Mar 8 2021 06:51:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 N 1.30832 * 125.96252 * 2 1 4 4 C 1.33244 * 109.82913 * 180.02562 * 3 2 1 5 5 C 1.50699 * 125.52598 * 180.02562 * 4 3 2 6 6 H 1.09005 * 109.47318 * 0.02562 * 5 4 3 7 7 C 1.52998 * 109.47124 * 120.00214 * 5 4 3 8 8 C 1.53001 * 109.47212 * 179.97438 * 7 5 4 9 9 C 1.52998 * 109.47231 * 299.99939 * 8 7 5 10 10 H 1.09000 * 109.47400 * 300.00385 * 9 8 7 11 11 N 1.46503 * 109.47107 * 179.97438 * 9 8 7 12 12 C 1.38997 * 119.99883 * 155.00017 * 11 9 8 13 13 N 1.32394 * 119.70618 * 180.02562 * 12 11 9 14 14 C 1.31970 * 121.62265 * 180.02562 * 13 12 11 15 15 C 1.38026 * 120.85871 * 0.02562 * 14 13 12 16 16 C 1.50699 * 120.33768 * 180.02562 * 15 14 13 17 17 O 1.42895 * 109.47158 * 119.99603 * 16 15 14 18 18 Si 1.86300 * 109.46944 * 0.02562 * 16 15 14 19 19 C 1.38882 * 119.32679 * 0.27449 * 15 14 13 20 20 C 1.38299 * 118.50654 * 359.45805 * 19 15 14 21 21 C 1.53007 * 109.46651 * 60.00159 * 9 8 7 22 22 C 1.52999 * 109.47201 * 299.99489 * 21 9 8 23 23 N 1.30716 * 108.94495 * 0.26784 * 4 3 2 24 24 N 1.34434 * 125.95989 * 180.02562 * 2 1 3 25 25 H 1.08998 * 109.47472 * 89.99668 * 1 2 3 26 26 H 1.09002 * 109.47231 * 209.99437 * 1 2 3 27 27 H 1.08999 * 109.47042 * 329.99475 * 1 2 3 28 28 H 1.09005 * 109.47099 * 59.99773 * 7 5 4 29 29 H 1.09002 * 109.46977 * 299.99948 * 7 5 4 30 30 H 1.09002 * 109.46651 * 179.97438 * 8 7 5 31 31 H 1.08995 * 109.46790 * 60.00355 * 8 7 5 32 32 H 0.97003 * 119.99989 * 335.01009 * 11 9 8 33 33 H 1.08002 * 119.57410 * 179.97438 * 14 13 12 34 34 H 1.09000 * 109.47247 * 240.00056 * 16 15 14 35 35 H 0.96698 * 114.00355 * 300.00487 * 17 16 15 36 36 H 1.48506 * 110.00048 * 180.02562 * 18 16 15 37 37 H 1.48502 * 109.99996 * 301.31619 * 18 16 15 38 38 H 1.07997 * 120.74872 * 179.70559 * 19 15 14 39 39 H 1.07995 * 120.45669 * 180.23706 * 20 19 15 40 40 H 1.09000 * 109.47034 * 60.00002 * 21 9 8 41 41 H 1.09002 * 109.46655 * 179.97438 * 21 9 8 42 42 H 1.09000 * 109.46991 * 300.00724 * 22 21 9 43 43 H 1.08992 * 109.46970 * 180.02562 * 22 21 9 44 44 H 0.96994 * 126.82090 * 359.97438 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2753 1.0590 0.0000 4 6 3.5553 0.6887 -0.0006 5 6 4.7372 1.6235 -0.0002 6 1 4.3847 2.6550 0.0011 7 6 5.5850 1.3733 1.2486 8 6 6.7854 2.3220 1.2487 9 6 7.6323 2.0730 -0.0009 10 1 7.9844 1.0414 -0.0016 11 7 8.7814 2.9818 -0.0011 12 6 9.9379 2.6396 -0.6921 13 7 10.9731 3.4650 -0.6880 14 6 12.0891 3.1785 -1.3314 15 6 12.2166 1.9991 -2.0370 16 6 13.4967 1.6835 -2.7670 17 8 14.0534 0.4730 -2.2508 18 14 14.7094 3.0768 -2.5248 19 6 11.1515 1.1086 -2.0717 20 6 9.9969 1.4334 -1.3832 21 6 6.7845 2.3233 -1.2498 22 6 5.5841 1.3746 -1.2499 23 7 3.6194 -0.6169 -0.0067 24 7 2.2964 -1.0881 -0.0005 25 1 -0.3634 0.0001 -1.0276 26 1 -0.3634 -0.8900 0.5137 27 1 -0.3633 0.8899 0.5139 28 1 5.9375 0.3418 1.2478 29 1 4.9815 1.5503 2.1389 30 1 7.3890 2.1440 2.1387 31 1 6.4332 3.3535 1.2494 32 1 8.7352 3.8222 0.4811 33 1 12.9131 3.8762 -1.3062 34 1 13.2885 1.5633 -3.8302 35 1 14.2639 0.5077 -1.3076 36 1 15.9759 2.7780 -3.2404 37 1 14.1299 4.3479 -3.0283 38 1 11.2246 0.1814 -2.6206 39 1 9.1509 0.7622 -1.3857 40 1 6.4324 3.3548 -1.2491 41 1 7.3880 2.1463 -2.1400 42 1 5.9364 0.3430 -1.2505 43 1 4.9805 1.5526 -2.1397 44 1 2.0093 -2.0146 -0.0006 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_15608010_13915762.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:51:38 Heat of formation + Delta-G solvation = 86.504529 kcal Electronic energy + Delta-G solvation = -25681.628875 eV Core-core repulsion = 22022.638591 eV Total energy + Delta-G solvation = -3658.990284 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.164 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.22969 -41.48587 -39.90536 -37.91071 -36.30033 -34.02339 -33.38188 -33.35371 -32.01621 -31.68873 -30.06210 -28.65999 -26.36278 -24.96415 -24.40314 -23.64850 -22.68579 -22.10886 -21.36743 -20.63127 -18.92446 -18.61565 -18.44708 -17.63940 -16.74689 -16.56781 -16.48698 -16.06301 -15.82430 -15.54938 -15.48882 -15.20936 -14.99992 -14.60696 -14.32116 -14.09009 -14.01316 -13.94563 -13.68123 -13.50401 -13.34924 -13.25437 -12.84690 -12.46452 -12.35150 -12.16348 -12.09501 -12.04539 -11.79152 -11.44631 -11.14057 -11.09741 -10.95456 -10.73022 -10.45068 -10.40610 -10.36272 -8.67121 -4.98201 0.24319 0.41548 0.54936 1.35284 1.64501 1.69396 1.78704 1.97806 2.09301 2.85166 2.93262 3.49303 3.56510 3.61527 3.67594 3.69645 3.80413 3.81134 3.98126 4.09234 4.10986 4.16903 4.18388 4.34860 4.35719 4.42262 4.45967 4.54570 4.61150 4.65372 4.70524 4.77639 4.78087 4.96074 5.02076 5.03817 5.04955 5.09354 5.13228 5.22273 5.26582 5.31040 5.37118 5.43729 5.56511 6.05122 6.15594 6.58638 6.80746 7.05824 7.16752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 C 0.285 3.715 3 N -0.577 5.577 4 C 0.225 3.775 5 C 0.007 3.993 6 H 0.099 0.901 7 C -0.096 4.096 8 C -0.115 4.115 9 C 0.158 3.842 10 H 0.085 0.915 11 N -0.714 5.714 12 C 0.399 3.601 13 N -0.564 5.564 14 C 0.146 3.854 15 C -0.238 4.238 16 C -0.055 4.055 17 O -0.557 6.557 18 Si 0.767 3.233 19 C -0.013 4.013 20 C -0.244 4.244 21 C -0.125 4.125 22 C -0.097 4.097 23 N -0.337 5.337 24 N -0.479 5.479 25 H 0.106 0.894 26 H 0.110 0.890 27 H 0.099 0.901 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.081 0.919 31 H 0.082 0.918 32 H 0.408 0.592 33 H 0.168 0.832 34 H 0.106 0.894 35 H 0.394 0.606 36 H -0.296 1.296 37 H -0.286 1.286 38 H 0.143 0.857 39 H 0.145 0.855 40 H 0.073 0.927 41 H 0.065 0.935 42 H 0.068 0.932 43 H 0.060 0.940 44 H 0.454 0.546 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.855 -2.194 2.968 6.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.136 4.136 2 C 0.007 3.993 3 N -0.307 5.307 4 C -0.057 4.057 5 C -0.014 4.014 6 H 0.118 0.882 7 C -0.135 4.135 8 C -0.153 4.153 9 C 0.053 3.947 10 H 0.103 0.897 11 N -0.345 5.345 12 C 0.163 3.837 13 N -0.281 5.281 14 C -0.011 4.011 15 C -0.244 4.244 16 C -0.166 4.166 17 O -0.365 6.365 18 Si 0.674 3.326 19 C -0.038 4.038 20 C -0.268 4.268 21 C -0.164 4.164 22 C -0.136 4.136 23 N -0.166 5.166 24 N -0.199 5.199 25 H 0.124 0.876 26 H 0.128 0.872 27 H 0.118 0.882 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.100 0.900 31 H 0.100 0.900 32 H 0.244 0.756 33 H 0.184 0.816 34 H 0.123 0.877 35 H 0.244 0.756 36 H -0.224 1.224 37 H -0.214 1.214 38 H 0.160 0.840 39 H 0.163 0.837 40 H 0.091 0.909 41 H 0.084 0.916 42 H 0.087 0.913 43 H 0.079 0.921 44 H 0.302 0.698 Dipole moment (debyes) X Y Z Total from point charges -4.131 -1.175 2.444 4.942 hybrid contribution -0.855 -1.339 -0.842 1.798 sum -4.985 -2.514 1.602 5.809 Atomic orbital electron populations 1.20630 0.80622 1.06465 1.05913 1.25170 0.98145 0.82280 0.93706 1.70402 1.02007 1.31135 1.27185 1.24549 0.93628 0.90408 0.97161 1.19684 0.88227 0.96402 0.97056 0.88250 1.21409 0.95623 1.00283 0.96219 1.21695 0.95696 1.00867 0.97035 1.21059 0.84483 0.93825 0.95344 0.89728 1.44647 1.10866 1.24025 1.54930 1.18608 0.86786 0.89359 0.88972 1.67158 1.01288 1.34324 1.25352 1.22460 0.94002 0.94218 0.90380 1.21033 0.98894 0.97999 1.06437 1.24853 0.96076 0.96670 0.98963 1.86447 1.83547 1.35371 1.31095 0.93835 0.75461 0.73631 0.89689 1.21369 0.90711 0.98248 0.93506 1.21652 1.01407 0.98634 1.05133 1.21952 0.95907 1.00297 0.98223 1.21410 0.95734 1.00258 0.96179 1.77888 0.98182 1.12587 1.27984 1.48002 1.03652 1.10967 1.57288 0.87556 0.87169 0.88212 0.91329 0.91305 0.90014 0.89957 0.75594 0.81575 0.87661 0.75616 1.22418 1.21352 0.83959 0.83736 0.90878 0.91622 0.91330 0.92099 0.69782 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.64 10.51 71.23 0.75 1.39 16 2 C 0.28 0.29 8.24 138.22 1.14 1.43 16 3 N -0.58 -4.10 11.19 -179.72 -2.01 -6.11 16 4 C 0.23 1.38 6.65 138.63 0.92 2.30 16 5 C 0.01 0.01 2.66 -11.54 -0.03 -0.02 16 6 H 0.10 0.09 8.14 -2.38 -0.02 0.07 16 7 C -0.10 0.15 5.19 30.59 0.16 0.31 16 8 C -0.11 0.51 5.39 30.59 0.16 0.67 16 9 C 0.16 -0.45 2.14 44.99 0.10 -0.36 16 10 H 0.08 -0.21 6.45 -2.39 -0.02 -0.22 16 11 N -0.71 0.08 5.24 -324.53 -1.70 -1.62 16 12 C 0.40 1.63 7.63 133.07 1.02 2.65 16 13 N -0.56 -3.58 10.39 -193.26 -2.01 -5.59 16 14 C 0.15 0.48 9.84 84.62 0.83 1.31 16 15 C -0.24 -0.50 5.40 -19.76 -0.11 -0.61 16 16 C -0.05 -0.03 2.84 71.24 0.20 0.17 16 17 O -0.56 -0.49 12.78 -148.98 -1.90 -2.40 16 18 Si 0.77 -0.76 29.82 68.60 2.05 1.29 16 19 C -0.01 -0.03 9.77 22.44 0.22 0.19 16 20 C -0.24 -0.58 8.83 22.50 0.20 -0.38 16 21 C -0.12 0.25 5.41 30.60 0.17 0.42 16 22 C -0.10 0.03 5.18 30.59 0.16 0.19 16 23 N -0.34 -2.09 12.80 -51.33 -0.66 -2.75 16 24 N -0.48 -0.24 7.45 -50.71 -0.38 -0.62 16 25 H 0.11 -1.10 8.14 -2.39 -0.02 -1.12 16 26 H 0.11 -1.47 8.14 -2.39 -0.02 -1.49 16 27 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 28 H 0.07 0.00 8.14 -2.38 -0.02 -0.02 16 29 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 31 H 0.08 -0.45 8.14 -2.39 -0.02 -0.47 16 32 H 0.41 -0.46 8.73 -92.71 -0.81 -1.27 16 33 H 0.17 -0.15 4.88 -2.91 -0.01 -0.16 16 34 H 0.11 0.16 7.96 -2.39 -0.02 0.14 16 35 H 0.39 -2.67 8.70 -74.06 -0.64 -3.32 16 36 H -0.30 -1.82 7.11 99.48 0.71 -1.11 16 37 H -0.29 -1.15 7.11 99.48 0.71 -0.44 16 38 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 39 H 0.14 -0.08 6.07 -2.91 -0.02 -0.10 16 40 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 41 H 0.07 -0.03 7.65 -2.39 -0.02 -0.04 16 42 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 43 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 44 H 0.45 -2.97 8.96 -213.11 -1.91 -4.88 16 Total: 0.00 -20.87 356.57 -3.00 -23.87 By element: Atomic # 1 Polarization: -13.45 SS G_CDS: -2.27 Total: -15.72 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 5.88 Total: 9.65 kcal Atomic # 7 Polarization: -9.94 SS G_CDS: -6.76 Total: -16.70 kcal Atomic # 8 Polarization: -0.49 SS G_CDS: -1.90 Total: -2.40 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: 2.05 Total: 1.29 kcal Total: -20.87 -3.00 -23.87 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15608010_13915762.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.375 kcal (2) G-P(sol) polarization free energy of solvation -20.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 89.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.870 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds