Wall clock time and date at job start Mon Mar 8 2021 06:51:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 N 1.30831 * 125.96144 * 2 1 4 4 C 1.33232 * 109.82860 * 180.02562 * 3 2 1 5 5 C 1.50712 * 125.52564 * 180.02562 * 4 3 2 6 6 H 1.09000 * 109.46559 * 359.97438 * 5 4 3 7 7 C 1.52996 * 109.47086 * 119.99670 * 5 4 3 8 8 C 1.53002 * 109.46972 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.46817 * 299.99733 * 8 7 5 10 10 H 1.09001 * 109.47502 * 300.00518 * 9 8 7 11 11 N 1.46500 * 109.47007 * 180.02562 * 9 8 7 12 12 C 1.39142 * 120.00129 * 85.00355 * 11 9 8 13 13 N 1.32335 * 119.71656 * 359.97438 * 12 11 9 14 14 C 1.32013 * 121.64665 * 179.97438 * 13 12 11 15 15 C 1.37987 * 120.89770 * 0.02562 * 14 13 12 16 16 C 1.50703 * 120.32267 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.46772 * 244.99520 * 16 15 14 18 18 Si 1.86302 * 109.47292 * 4.99423 * 16 15 14 19 19 C 1.38896 * 119.34868 * 359.97438 * 15 14 13 20 20 C 1.38445 * 118.48609 * 359.75635 * 19 15 14 21 21 F 1.35105 * 120.47563 * 180.26595 * 20 19 15 22 22 C 1.53006 * 109.47127 * 60.00361 * 9 8 7 23 23 C 1.52997 * 109.46964 * 239.99563 * 5 4 3 24 24 N 1.30705 * 108.94992 * 0.25836 * 4 3 2 25 25 N 1.34429 * 125.96238 * 180.02562 * 2 1 3 26 26 H 1.09003 * 109.46702 * 90.00326 * 1 2 3 27 27 H 1.09004 * 109.46765 * 210.00212 * 1 2 3 28 28 H 1.08998 * 109.46848 * 330.00110 * 1 2 3 29 29 H 1.08996 * 109.47452 * 59.99790 * 7 5 4 30 30 H 1.09000 * 109.47054 * 299.99950 * 7 5 4 31 31 H 1.09002 * 109.47070 * 179.97438 * 8 7 5 32 32 H 1.08996 * 109.47407 * 59.99513 * 8 7 5 33 33 H 0.97002 * 120.00030 * 265.00025 * 11 9 8 34 34 H 1.07997 * 119.54842 * 179.97438 * 14 13 12 35 35 H 1.08997 * 109.47125 * 124.99436 * 16 15 14 36 36 H 0.96703 * 114.00433 * 60.00192 * 17 16 15 37 37 H 1.48498 * 109.99820 * 58.68322 * 18 16 15 38 38 H 1.48499 * 109.99908 * 180.02562 * 18 16 15 39 39 H 1.08002 * 120.76046 * 180.02562 * 19 15 14 40 40 H 1.08993 * 109.46955 * 60.00011 * 22 9 8 41 41 H 1.09000 * 109.47050 * 179.97438 * 22 9 8 42 42 H 1.09002 * 109.47153 * 60.00001 * 23 5 4 43 43 H 1.08993 * 109.47194 * 300.00289 * 23 5 4 44 44 H 0.97004 * 126.82041 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.2754 1.0590 0.0000 4 6 3.5552 0.6888 -0.0006 5 6 4.7373 1.6237 -0.0002 6 1 4.3847 2.6551 0.0001 7 6 5.5850 1.3736 1.2487 8 6 6.7846 2.3232 1.2494 9 6 7.6320 2.0752 -0.0002 10 1 7.9848 1.0438 -0.0012 11 7 8.7810 2.9840 0.0007 12 6 9.9391 2.6406 0.6914 13 7 9.9963 1.4919 1.3460 14 6 11.0757 1.1279 2.0132 15 6 12.1914 1.9389 2.0526 16 6 13.4169 1.5102 2.8178 17 8 13.6332 2.4052 3.9106 18 14 13.1694 -0.2174 3.4695 19 6 12.1743 3.1535 1.3791 20 6 11.0307 3.5066 0.6832 21 9 10.9722 4.6763 0.0096 22 6 6.7842 2.3253 -1.2492 23 6 5.5845 1.3751 -1.2497 24 7 3.6195 -0.6167 -0.0065 25 7 2.2965 -1.0881 -0.0005 26 1 -0.3633 -0.0001 -1.0277 27 1 -0.3633 -0.8900 0.5139 28 1 -0.3633 0.8900 0.5138 29 1 5.9375 0.3422 1.2480 30 1 4.9814 1.5506 2.1389 31 1 7.3883 2.1453 2.1393 32 1 6.4318 3.3544 1.2502 33 1 8.7345 3.8251 -0.4802 34 1 11.0853 0.1829 2.5359 35 1 14.2831 1.5284 2.1563 36 1 12.9009 2.4403 4.5412 37 1 12.9119 -1.1524 2.3450 38 1 14.3709 -0.6516 4.2267 39 1 13.0349 3.8058 1.3944 40 1 6.4314 3.3566 -1.2482 41 1 7.3880 2.1491 -2.1394 42 1 4.9805 1.5533 -2.1395 43 1 5.9369 0.3438 -1.2505 44 1 2.0094 -2.0146 -0.0006 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_15608010_17656566.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:51:48 Heat of formation + Delta-G solvation = 40.760680 kcal Electronic energy + Delta-G solvation = -28221.697750 eV Core-core repulsion = 24091.269888 eV Total energy + Delta-G solvation = -4130.427861 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.155 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.81156 -43.13982 -41.42269 -39.86780 -37.97550 -36.31812 -34.02965 -33.31779 -33.16733 -31.94141 -31.78748 -30.05001 -28.69564 -26.50034 -25.29204 -23.98959 -23.72804 -22.82119 -22.21352 -21.35594 -20.61036 -19.23249 -18.82178 -18.44568 -18.25979 -17.54514 -16.90784 -16.69002 -16.66896 -16.09923 -15.91580 -15.78054 -15.41288 -15.32596 -15.23151 -14.93745 -14.51823 -14.29431 -14.17505 -14.15622 -13.94693 -13.75527 -13.58058 -13.37074 -13.21372 -12.85349 -12.59889 -12.36939 -12.18361 -12.10127 -12.05101 -11.79624 -11.37018 -11.12943 -10.95220 -10.90515 -10.61628 -10.61129 -10.42047 -10.35723 -8.70852 -5.06852 -0.01643 0.17565 0.62709 1.24940 1.60861 1.66570 1.90828 1.95599 1.99675 2.60885 2.91644 3.10198 3.30139 3.44639 3.54467 3.62398 3.67524 3.70868 3.79923 3.87702 4.02828 4.07992 4.18815 4.24287 4.33383 4.39220 4.43128 4.44324 4.48161 4.49465 4.54168 4.71971 4.72427 4.79595 4.81235 5.00504 5.02474 5.07185 5.14394 5.17183 5.30239 5.30583 5.38362 5.46804 5.54841 6.02089 6.07025 6.23662 6.55011 7.01456 7.15526 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C 0.283 3.717 3 N -0.540 5.540 4 C 0.236 3.764 5 C 0.006 3.994 6 H 0.099 0.901 7 C -0.105 4.105 8 C -0.126 4.126 9 C 0.156 3.844 10 H 0.094 0.906 11 N -0.713 5.713 12 C 0.393 3.607 13 N -0.510 5.510 14 C 0.149 3.851 15 C -0.212 4.212 16 C -0.054 4.054 17 O -0.541 6.541 18 Si 0.683 3.317 19 C -0.037 4.037 20 C -0.022 4.022 21 F -0.134 7.134 22 C -0.127 4.127 23 C -0.104 4.104 24 N -0.310 5.310 25 N -0.484 5.484 26 H 0.093 0.907 27 H 0.084 0.916 28 H 0.099 0.901 29 H 0.074 0.926 30 H 0.068 0.932 31 H 0.074 0.926 32 H 0.065 0.935 33 H 0.411 0.589 34 H 0.162 0.838 35 H 0.115 0.885 36 H 0.379 0.621 37 H -0.254 1.254 38 H -0.252 1.252 39 H 0.148 0.852 40 H 0.072 0.928 41 H 0.074 0.926 42 H 0.070 0.930 43 H 0.075 0.925 44 H 0.441 0.559 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.990 -2.049 0.977 5.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C 0.005 3.995 3 N -0.269 5.269 4 C -0.047 4.047 5 C -0.015 4.015 6 H 0.117 0.883 7 C -0.144 4.144 8 C -0.165 4.165 9 C 0.051 3.949 10 H 0.112 0.888 11 N -0.345 5.345 12 C 0.155 3.845 13 N -0.227 5.227 14 C -0.008 4.008 15 C -0.217 4.217 16 C -0.166 4.166 17 O -0.346 6.346 18 Si 0.585 3.415 19 C -0.064 4.064 20 C -0.048 4.048 21 F -0.113 7.113 22 C -0.165 4.165 23 C -0.143 4.143 24 N -0.138 5.138 25 N -0.202 5.202 26 H 0.112 0.888 27 H 0.103 0.897 28 H 0.118 0.882 29 H 0.093 0.907 30 H 0.086 0.914 31 H 0.092 0.908 32 H 0.084 0.916 33 H 0.248 0.752 34 H 0.179 0.821 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.179 1.179 38 H -0.176 1.176 39 H 0.166 0.834 40 H 0.090 0.910 41 H 0.092 0.908 42 H 0.089 0.911 43 H 0.093 0.907 44 H 0.286 0.714 Dipole moment (debyes) X Y Z Total from point charges -4.461 -3.444 0.605 5.668 hybrid contribution 0.442 0.825 -0.812 1.239 sum -4.018 -2.619 -0.207 4.801 Atomic orbital electron populations 1.20432 0.83505 1.05209 1.04747 1.24448 0.96713 0.82858 0.95464 1.70393 1.01437 1.29560 1.25526 1.24177 0.93068 0.90116 0.97322 1.19638 0.88558 0.96749 0.96587 0.88298 1.21506 0.95694 1.00706 0.96465 1.21924 0.96161 0.99730 0.98650 1.21024 0.84510 0.94763 0.94584 0.88764 1.44707 1.11509 1.23694 1.54582 1.18429 0.86149 0.89256 0.90691 1.67308 1.28064 1.14946 1.12405 1.22310 0.87010 0.97979 0.93506 1.20909 0.98599 0.96818 1.05418 1.24847 0.96651 1.04884 0.90183 1.86512 1.46082 1.65688 1.36310 0.94883 0.87098 0.74414 0.85130 1.21268 0.96594 0.96135 0.92380 1.18013 0.96617 0.85922 1.04291 1.91492 1.96711 1.44750 1.78333 1.21818 0.96519 1.00560 0.97567 1.21488 0.95490 1.00432 0.96851 1.77988 0.96537 1.12372 1.26917 1.48036 1.04392 1.10132 1.57672 0.88839 0.89730 0.88206 0.90710 0.91369 0.90759 0.91629 0.75164 0.82120 0.86793 0.77310 1.17850 1.17641 0.83426 0.90973 0.90780 0.91108 0.90673 0.71383 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 0.28 10.51 36.01 0.38 0.65 16 2 C 0.28 0.21 8.24 -155.69 -1.28 -1.08 16 3 N -0.54 -1.87 11.19 -8.16 -0.09 -1.96 16 4 C 0.24 0.71 6.65 -156.86 -1.04 -0.33 16 5 C 0.01 0.00 2.66 -91.77 -0.24 -0.24 16 6 H 0.10 0.05 8.14 -51.93 -0.42 -0.37 16 7 C -0.10 -0.02 5.19 -26.73 -0.14 -0.16 16 8 C -0.13 0.04 5.51 -26.73 -0.15 -0.10 16 9 C 0.16 -0.06 2.47 -67.93 -0.17 -0.22 16 10 H 0.09 0.10 7.54 -51.93 -0.39 -0.29 16 11 N -0.71 -0.12 5.23 -53.85 -0.28 -0.40 16 12 C 0.39 0.67 7.47 -154.86 -1.16 -0.49 16 13 N -0.51 -0.87 9.20 -12.36 -0.11 -0.98 16 14 C 0.15 0.01 9.84 -17.57 -0.17 -0.16 16 15 C -0.21 0.00 5.36 -104.47 -0.56 -0.55 16 16 C -0.05 0.04 2.82 36.01 0.10 0.14 16 17 O -0.54 0.13 12.84 -35.23 -0.45 -0.32 16 18 Si 0.68 -1.11 29.83 -169.99 -5.07 -6.18 16 19 C -0.04 -0.04 9.82 -39.26 -0.39 -0.42 16 20 C -0.02 -0.04 7.35 -39.09 -0.29 -0.33 16 21 F -0.13 -0.33 16.65 2.25 0.04 -0.30 16 22 C -0.13 0.17 5.39 -26.70 -0.14 0.03 16 23 C -0.10 0.03 5.19 -26.71 -0.14 -0.11 16 24 N -0.31 -0.97 12.80 32.42 0.41 -0.55 16 25 N -0.48 -0.22 7.45 32.62 0.24 0.02 16 26 H 0.09 -0.41 8.14 -51.93 -0.42 -0.84 16 27 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 28 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 29 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.06 -0.03 8.14 -51.93 -0.42 -0.46 16 33 H 0.41 -0.36 8.07 -40.82 -0.33 -0.69 16 34 H 0.16 -0.37 4.91 -52.49 -0.26 -0.63 16 35 H 0.11 -0.05 7.96 -51.93 -0.41 -0.47 16 36 H 0.38 -1.53 8.70 45.56 0.40 -1.14 16 37 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 38 H -0.25 -0.43 7.11 56.52 0.40 -0.02 16 39 H 0.15 0.02 8.06 -52.49 -0.42 -0.40 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 41 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 42 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 43 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 44 H 0.44 -1.30 8.96 -182.33 -1.63 -2.93 16 LS Contribution 365.75 15.07 5.51 5.51 Total: 0.00 -8.65 365.75 -12.51 -21.17 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -7.32 Total: -12.62 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -5.39 Total: -3.38 kcal Atomic # 7 Polarization: -4.05 SS G_CDS: 0.17 Total: -3.87 kcal Atomic # 8 Polarization: 0.13 SS G_CDS: -0.45 Total: -0.32 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -1.11 SS G_CDS: -5.07 Total: -6.18 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -8.65 -12.51 -21.17 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_15608010_17656566.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.926 kcal (2) G-P(sol) polarization free energy of solvation -8.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.514 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.166 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds