Wall clock time and date at job start Mon Mar 8 2021 05:22:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52991 * 109.47490 * 2 1 4 4 C 1.52999 * 109.47203 * 239.99430 * 2 1 3 5 5 O 1.45209 * 109.46854 * 119.99790 * 2 1 3 6 6 C 1.34634 * 116.99600 * 59.99786 * 5 2 1 7 7 O 1.21513 * 120.00426 * 359.97438 * 6 5 2 8 8 N 1.34775 * 119.99961 * 179.97438 * 6 5 2 9 9 C 1.46497 * 120.00610 * 179.97438 * 8 6 5 10 10 H 1.09004 * 112.84569 * 23.80716 * 9 8 6 11 11 C 1.53787 * 113.61922 * 154.99871 * 9 8 6 12 12 C 1.53783 * 87.07868 * 89.11831 * 11 9 8 13 13 H 1.08998 * 113.61170 * 270.80113 * 12 11 9 14 14 C 1.50695 * 113.61311 * 139.98468 * 12 11 9 15 15 C 1.37933 * 119.92759 * 121.83165 * 14 12 11 16 16 C 1.39614 * 119.84936 * 180.25212 * 15 14 12 17 17 C 1.47788 * 120.14462 * 179.74307 * 16 15 14 18 18 C 1.35958 * 125.92912 * 179.43949 * 17 16 15 19 19 C 1.40931 * 106.73683 * 180.26373 * 18 17 16 20 20 C 1.34734 * 107.03349 * 359.97438 * 19 18 17 21 21 C 1.50695 * 125.66493 * 180.02562 * 20 19 18 22 22 O 1.42898 * 109.47430 * 65.00058 * 21 20 19 23 23 Si 1.86295 * 109.47383 * 185.00426 * 21 20 19 24 24 O 1.34301 * 108.67336 * 0.02562 * 20 19 18 25 25 C 1.39574 * 119.70650 * 359.47110 * 16 15 14 26 26 C 1.37972 * 119.85496 * 0.24865 * 25 16 15 27 27 C 1.38339 * 120.14192 * 0.02562 * 26 25 16 28 28 C 1.53779 * 87.17224 * 25.39299 * 12 11 9 29 29 H 1.08994 * 109.47099 * 300.00551 * 1 2 3 30 30 H 1.09005 * 109.46654 * 60.00160 * 1 2 3 31 31 H 1.08993 * 109.47391 * 180.02562 * 1 2 3 32 32 H 1.09006 * 109.47358 * 179.97438 * 3 2 1 33 33 H 1.09005 * 109.47042 * 299.99603 * 3 2 1 34 34 H 1.09000 * 109.47817 * 59.99804 * 3 2 1 35 35 H 1.09003 * 109.47510 * 300.00713 * 4 2 1 36 36 H 1.09005 * 109.46981 * 60.00610 * 4 2 1 37 37 H 1.08992 * 109.47435 * 180.02562 * 4 2 1 38 38 H 0.97005 * 119.99682 * 359.97438 * 8 6 5 39 39 H 1.09002 * 113.61103 * 334.56960 * 11 9 8 40 40 H 1.08991 * 113.69188 * 203.67907 * 11 9 8 41 41 H 1.07999 * 120.07351 * 359.97438 * 15 14 12 42 42 H 1.08001 * 126.63016 * 0.23063 * 18 17 16 43 43 H 1.07997 * 126.48312 * 179.97438 * 19 18 17 44 44 H 1.09005 * 109.47056 * 305.00375 * 21 20 19 45 45 H 0.96704 * 113.99759 * 59.99672 * 22 21 20 46 46 H 1.48504 * 110.00017 * 58.67931 * 23 21 20 47 47 H 1.48506 * 110.00284 * 180.02562 * 23 21 20 48 48 H 1.08003 * 120.07320 * 180.23496 * 25 16 15 49 49 H 1.08001 * 119.93211 * 179.97438 * 26 25 16 50 50 H 1.07999 * 119.84945 * 179.97438 * 27 26 25 51 51 H 1.09001 * 113.61501 * 89.15695 * 28 12 11 52 52 H 1.09009 * 113.61184 * 220.06011 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7214 -1.2492 5 8 2.0139 -0.6845 1.1857 6 6 1.6521 -1.9723 1.3384 7 8 0.9507 -2.5094 0.5041 8 7 2.0678 -2.6657 2.4167 9 6 1.6736 -4.0668 2.5834 10 1 1.4205 -4.5503 1.6398 11 6 2.6471 -4.8816 3.4514 12 6 1.8072 -4.4457 4.6636 13 1 2.1380 -3.5076 5.1093 14 6 1.6048 -5.5380 5.6819 15 6 2.0192 -5.3503 6.9840 16 6 1.8357 -6.3654 7.9248 17 6 2.2824 -6.1734 9.3205 18 6 2.1532 -7.0743 10.3305 19 6 2.7058 -6.4762 11.4808 20 6 3.1407 -5.2532 11.1196 21 6 3.8057 -4.2530 12.0297 22 8 5.0614 -4.7725 12.4719 23 14 4.0839 -2.6603 11.1043 24 8 2.8831 -5.0735 9.8139 25 6 1.2233 -7.5600 7.5429 26 6 0.8082 -7.7326 6.2384 27 6 0.9983 -6.7249 5.3099 28 6 0.6269 -4.2835 3.6913 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3634 -1.0276 0.0005 32 1 3.1301 1.4424 0.0005 33 1 1.6768 1.9562 -0.8901 34 1 1.6768 1.9564 0.8899 35 1 1.6766 -1.7490 -1.2492 36 1 1.6767 -0.2075 -2.1392 37 1 3.1299 -0.7218 -1.2490 38 1 2.6280 -2.2370 3.0826 39 1 3.6624 -4.4852 3.4583 40 1 2.6127 -5.9539 3.2592 41 1 2.4887 -4.4219 7.2741 42 1 1.7120 -8.0578 10.2643 43 1 2.7687 -6.9152 12.4655 44 1 3.1662 -4.0652 12.8922 45 1 5.6822 -4.9635 11.7555 46 1 2.7887 -2.1262 10.6117 47 1 4.7399 -1.6656 11.9908 48 1 1.0749 -8.3477 8.2667 49 1 0.3346 -8.6566 5.9414 50 1 0.6719 -6.8652 4.2900 51 1 0.0380 -5.1919 3.5640 52 1 0.0137 -3.4048 3.8918 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_12175800_14315990.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:22:21 Heat of formation + Delta-G solvation = -44.221921 kcal Electronic energy + Delta-G solvation = -32968.183889 eV Core-core repulsion = 28480.955809 eV Total energy + Delta-G solvation = -4487.228081 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.182 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.63617 -41.92722 -41.06864 -39.42470 -38.00888 -37.70573 -35.29054 -34.47026 -33.96210 -33.09331 -31.94907 -30.34324 -28.32106 -28.27960 -26.88139 -26.53843 -26.48843 -24.05925 -23.57274 -23.13007 -22.01827 -21.32298 -21.06427 -20.11976 -19.26917 -18.83807 -18.02935 -17.52171 -17.43654 -17.10732 -17.01773 -16.74233 -16.50619 -16.12486 -15.81137 -15.72320 -15.40269 -15.24889 -14.87288 -14.66682 -14.42796 -14.29481 -14.25425 -14.01822 -13.90499 -13.75082 -13.59953 -13.43578 -13.41452 -13.06682 -12.91332 -12.87209 -12.82081 -12.81579 -12.50075 -12.40681 -12.24252 -12.11127 -11.88557 -11.83661 -11.35089 -11.27869 -11.01937 -10.95570 -10.67474 -10.47393 -10.17392 -9.78282 -8.87256 -5.07573 -0.29130 0.32064 0.94703 1.12879 1.17001 1.47889 1.66797 1.79612 1.88250 1.90795 2.74472 3.10483 3.23831 3.31015 3.37841 3.54521 3.59219 3.78450 3.79086 3.84088 3.88391 3.92243 3.97992 4.00083 4.04430 4.11663 4.26177 4.29709 4.42626 4.46821 4.56868 4.59328 4.60053 4.63551 4.63820 4.78176 4.78904 4.79460 4.85280 4.87385 4.88377 4.90833 4.94013 4.98305 5.00508 5.03640 5.09850 5.32037 5.34329 5.37479 5.42255 5.47850 5.50750 5.57648 5.63510 5.87355 6.06582 6.38581 6.41749 7.43509 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.653 3.347 7 O -0.564 6.564 8 N -0.695 5.695 9 C 0.137 3.863 10 H 0.110 0.890 11 C -0.135 4.135 12 C -0.075 4.075 13 H 0.100 0.900 14 C -0.067 4.067 15 C -0.097 4.097 16 C -0.016 4.016 17 C 0.038 3.962 18 C -0.193 4.193 19 C -0.171 4.171 20 C -0.055 4.055 21 C -0.027 4.027 22 O -0.531 6.531 23 Si 0.701 3.299 24 O -0.164 6.164 25 C -0.099 4.099 26 C -0.111 4.111 27 C -0.108 4.108 28 C -0.145 4.145 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.407 0.593 39 H 0.080 0.920 40 H 0.103 0.897 41 H 0.128 0.872 42 H 0.153 0.847 43 H 0.153 0.847 44 H 0.132 0.868 45 H 0.383 0.617 46 H -0.253 1.253 47 H -0.246 1.246 48 H 0.128 0.872 49 H 0.131 0.869 50 H 0.128 0.872 51 H 0.099 0.901 52 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.802 -0.402 -1.330 2.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.101 3.899 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.280 6.280 6 C 0.406 3.594 7 O -0.453 6.453 8 N -0.354 5.354 9 C 0.032 3.968 10 H 0.128 0.872 11 C -0.173 4.173 12 C -0.093 4.093 13 H 0.118 0.882 14 C -0.067 4.067 15 C -0.115 4.115 16 C -0.017 4.017 17 C -0.012 4.012 18 C -0.212 4.212 19 C -0.190 4.190 20 C -0.105 4.105 21 C -0.137 4.137 22 O -0.337 6.337 23 Si 0.600 3.400 24 O -0.062 6.062 25 C -0.117 4.117 26 C -0.129 4.129 27 C -0.126 4.126 28 C -0.184 4.184 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.242 0.758 39 H 0.099 0.901 40 H 0.121 0.879 41 H 0.146 0.854 42 H 0.171 0.829 43 H 0.171 0.829 44 H 0.149 0.851 45 H 0.231 0.769 46 H -0.177 1.177 47 H -0.171 1.171 48 H 0.146 0.854 49 H 0.148 0.852 50 H 0.146 0.854 51 H 0.117 0.883 52 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 1.064 0.621 -1.436 1.892 hybrid contribution -0.261 -0.465 0.896 1.043 sum 0.803 0.155 -0.540 0.980 Atomic orbital electron populations 1.22522 0.93841 1.05069 1.02708 1.22119 0.94446 0.91545 0.81836 1.21880 1.02344 0.92360 1.03340 1.22523 1.01617 1.03454 0.96534 1.86307 1.71504 1.23394 1.46764 1.18068 0.78663 0.80639 0.82004 1.90919 1.40781 1.70369 1.43234 1.44371 1.55374 1.11857 1.23752 1.21852 0.95822 0.79499 0.99626 0.87204 1.23461 0.98715 1.01176 0.93904 1.21633 0.97762 0.97031 0.92904 0.88211 1.19577 0.98262 0.95160 0.93707 1.21150 0.99488 0.98563 0.92268 1.17718 1.00623 0.95428 0.87891 1.20466 1.01175 0.85838 0.93749 1.21851 1.05975 1.01322 0.92007 1.21556 1.02411 0.94608 1.00408 1.22880 1.06349 0.98944 0.82334 1.24391 0.86830 1.03093 0.99431 1.86559 1.23485 1.86834 1.36776 0.94273 0.85966 0.74926 0.84796 1.83919 1.61149 1.37962 1.23123 1.21065 0.97930 0.95970 0.96773 1.21060 0.99764 0.99380 0.92696 1.21159 0.98513 0.92938 0.99966 1.23649 0.96491 1.03387 0.94830 0.92141 0.90925 0.89399 0.91378 0.89919 0.91407 0.89414 0.90924 0.92102 0.75832 0.90126 0.87905 0.85397 0.82945 0.82946 0.85058 0.76861 1.17728 1.17055 0.85395 0.85150 0.85443 0.88314 0.90498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.24 8.37 37.16 0.31 0.07 16 2 C 0.14 0.17 1.13 -90.63 -0.10 0.07 16 3 C -0.14 0.11 8.85 37.15 0.33 0.44 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.83 9.94 -40.31 -0.40 -1.23 16 6 C 0.65 1.67 8.06 54.05 0.44 2.11 16 7 O -0.56 -2.75 11.48 -19.28 -0.22 -2.97 16 8 N -0.70 0.28 5.26 -57.84 -0.30 -0.02 16 9 C 0.14 -0.18 4.33 -67.03 -0.29 -0.47 16 10 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 11 C -0.13 0.38 7.29 -25.91 -0.19 0.19 16 12 C -0.08 0.17 3.85 -90.96 -0.35 -0.18 16 13 H 0.10 -0.28 8.08 -51.93 -0.42 -0.70 16 14 C -0.07 0.06 5.28 -104.68 -0.55 -0.50 16 15 C -0.10 -0.03 9.38 -39.18 -0.37 -0.40 16 16 C -0.02 -0.02 5.87 -104.98 -0.62 -0.63 16 17 C 0.04 0.07 7.03 -36.50 -0.26 -0.18 16 18 C -0.19 -0.26 10.26 -39.38 -0.40 -0.67 16 19 C -0.17 -0.26 10.78 -39.80 -0.43 -0.69 16 20 C -0.06 -0.07 6.20 -35.55 -0.22 -0.29 16 21 C -0.03 0.00 2.98 36.00 0.11 0.11 16 22 O -0.53 0.05 12.88 -35.23 -0.45 -0.41 16 23 Si 0.70 -0.52 32.11 -169.99 -5.46 -5.98 16 24 O -0.16 -0.32 8.81 4.66 0.04 -0.28 16 25 C -0.10 0.01 9.56 -39.18 -0.37 -0.36 16 26 C -0.11 0.11 10.03 -39.64 -0.40 -0.29 16 27 C -0.11 0.13 8.53 -39.49 -0.34 -0.20 16 28 C -0.14 0.25 7.26 -25.83 -0.19 0.06 16 29 H 0.06 0.07 8.14 -51.93 -0.42 -0.36 16 30 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 31 H 0.09 0.30 5.88 -51.93 -0.31 -0.01 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 35 H 0.09 0.29 5.88 -51.93 -0.31 -0.02 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 38 H 0.41 -0.95 8.81 -40.82 -0.36 -1.31 16 39 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 40 H 0.10 -0.33 7.63 -51.93 -0.40 -0.73 16 41 H 0.13 -0.05 7.90 -52.49 -0.41 -0.47 16 42 H 0.15 -0.09 7.26 -52.49 -0.38 -0.47 16 43 H 0.15 0.06 8.06 -52.49 -0.42 -0.36 16 44 H 0.13 -0.07 7.96 -51.93 -0.41 -0.48 16 45 H 0.38 -1.46 8.70 45.56 0.40 -1.07 16 46 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 47 H -0.25 -0.40 7.11 56.52 0.40 0.01 16 48 H 0.13 -0.21 6.99 -52.48 -0.37 -0.57 16 49 H 0.13 -0.37 8.06 -52.49 -0.42 -0.80 16 50 H 0.13 -0.37 6.71 -52.49 -0.35 -0.72 16 51 H 0.10 -0.22 6.39 -51.93 -0.33 -0.56 16 52 H 0.08 -0.04 8.14 -51.92 -0.42 -0.47 16 LS Contribution 423.19 15.07 6.38 6.38 Total: 0.00 -7.43 423.19 -11.89 -19.31 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -7.89 Total: -13.06 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -3.58 Total: -1.74 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.30 Total: -0.02 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -1.03 Total: -4.89 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.46 Total: -5.98 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -7.43 -11.89 -19.31 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_12175800_14315990.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.909 kcal (2) G-P(sol) polarization free energy of solvation -7.426 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.335 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.887 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.222 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds