Wall clock time and date at job start Mon Mar 8 2021 06:26:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35250 * 117.00107 * 2 1 4 4 O 1.21773 * 120.00355 * 359.97438 * 3 2 1 5 5 C 1.40015 * 119.99742 * 179.97438 * 3 2 1 6 6 S 1.55351 * 120.00217 * 179.97438 * 5 3 2 7 7 O 1.52198 * 103.00145 * 286.87607 * 6 5 3 8 8 C 1.76197 * 103.00542 * 179.97438 * 6 5 3 9 9 C 1.38319 * 119.88188 * 210.00022 * 8 6 5 10 10 C 1.38021 * 120.11754 * 180.23515 * 9 8 6 11 11 C 1.39330 * 119.87848 * 359.51158 * 10 9 8 12 12 C 1.48402 * 120.11714 * 180.23017 * 11 10 9 13 13 C 1.39331 * 120.10389 * 123.76925 * 12 11 10 14 14 C 1.38051 * 119.92612 * 179.79147 * 13 12 11 15 15 C 1.38254 * 120.14692 * 0.48630 * 14 13 12 16 16 C 1.38569 * 120.22035 * 359.74200 * 15 14 13 17 17 F 1.35104 * 119.96184 * 179.97438 * 16 15 14 18 18 C 1.38216 * 120.06609 * 0.02650 * 16 15 14 19 19 C 1.50700 * 120.07025 * 179.97438 * 18 16 15 20 20 O 1.42900 * 109.47347 * 296.15463 * 19 18 16 21 21 Si 1.86308 * 109.47258 * 56.15688 * 19 18 16 22 22 H 1.48496 * 109.46877 * 53.60243 * 21 19 18 23 23 H 1.48500 * 109.46879 * 173.60233 * 21 19 18 24 24 H 1.48497 * 109.46965 * 293.60177 * 21 19 18 25 25 C 1.39327 * 119.76150 * 0.49177 * 11 10 9 26 26 C 1.38023 * 119.87884 * 359.73883 * 25 11 10 27 27 H 1.08998 * 109.46780 * 300.00626 * 1 2 3 28 28 H 1.09005 * 109.46958 * 60.00057 * 1 2 3 29 29 H 1.08988 * 109.47515 * 180.02562 * 1 2 3 30 30 H 1.08007 * 120.00026 * 359.97438 * 5 3 2 31 31 H 1.07995 * 119.93850 * 359.95792 * 9 8 6 32 32 H 1.08000 * 120.05523 * 179.72984 * 10 9 8 33 33 H 1.08003 * 120.03674 * 359.97438 * 13 12 11 34 34 H 1.08002 * 119.91970 * 180.20848 * 14 13 12 35 35 H 1.08006 * 119.88715 * 179.72233 * 15 14 13 36 36 H 1.09000 * 109.47143 * 176.15668 * 19 18 16 37 37 H 0.96703 * 114.00474 * 179.97438 * 20 19 18 38 38 H 1.08005 * 120.06601 * 179.76764 * 25 11 10 39 39 H 1.07994 * 119.93853 * 180.02562 * 26 25 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0431 1.2051 0.0000 4 8 1.3799 2.2264 -0.0005 5 6 3.4413 1.2783 0.0005 6 16 4.1467 2.6624 -0.0001 7 8 3.9192 3.1620 -1.4196 8 6 5.8563 2.2361 0.0017 9 6 6.7758 3.0777 0.6014 10 6 8.1167 2.7509 0.6014 11 6 8.5424 1.5659 0.0048 12 6 9.9823 1.2069 0.0062 13 6 10.3990 -0.0085 0.5451 14 6 11.7389 -0.3407 0.5406 15 6 12.6694 0.5344 0.0116 16 6 12.2623 1.7469 -0.5217 17 9 13.1761 2.5983 -1.0368 18 6 10.9225 2.0864 -0.5261 19 6 10.4797 3.4053 -1.1055 20 8 11.0320 4.4739 -0.3341 21 14 11.0721 3.5401 -2.8667 22 1 10.6261 2.3479 -3.6315 23 1 10.5071 4.7656 -3.4865 24 1 12.5551 3.6142 -2.8859 25 6 7.6120 0.7220 -0.5979 26 6 6.2740 1.0608 -0.5963 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0275 0.0005 30 1 4.0295 0.3724 0.0014 31 1 6.4443 3.9942 1.0665 32 1 8.8343 3.4109 1.0661 33 1 9.6741 -0.6913 0.9632 34 1 12.0614 -1.2843 0.9553 35 1 13.7172 0.2722 0.0143 36 1 9.3916 3.4652 -1.0825 37 1 10.7883 5.3545 -0.6508 38 1 7.9370 -0.1959 -1.0652 39 1 5.5519 0.4072 -1.0629 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_13569790_11652898.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:26:18 Heat of formation + Delta-G solvation = -190.614463 kcal Electronic energy + Delta-G solvation = -27769.869244 eV Core-core repulsion = 23455.341624 eV Total energy + Delta-G solvation = -4314.527620 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 351.071 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -49.10000 -39.99936 -38.48674 -38.00236 -36.76719 -34.70615 -32.87902 -31.71868 -31.40488 -30.61985 -29.06870 -28.47170 -26.03827 -25.93707 -23.62657 -22.26559 -21.61754 -20.96029 -19.89984 -17.79931 -17.69008 -17.12571 -16.87047 -16.18585 -15.87536 -15.72032 -15.38255 -15.03059 -14.88138 -14.72985 -14.44772 -14.39543 -14.17138 -13.74780 -13.56411 -13.32378 -13.07064 -12.70686 -12.51724 -12.28170 -12.16766 -12.00931 -11.92483 -11.69494 -11.44053 -11.33666 -10.99479 -10.84483 -10.67110 -10.55235 -10.33982 -9.73894 -9.38483 -9.17282 -8.76616 -8.67178 -8.50488 -8.39872 -8.09738 -7.15401 -5.80351 0.75910 0.93405 1.65423 1.81522 2.00428 2.27558 2.38148 2.77727 3.33407 3.51382 3.98292 4.10112 4.19086 4.50657 4.53301 4.61129 4.70720 4.78200 4.95282 5.09742 5.12553 5.29924 5.36742 5.38958 5.56409 5.77003 5.85378 5.90220 5.95827 5.99182 6.03811 6.07707 6.21388 6.22440 6.24645 6.34836 6.46742 6.58340 6.74259 6.78972 6.97923 7.35462 7.39693 7.48791 7.60163 8.31032 9.85231 Molecular weight = 351.07amu Principal moments of inertia in cm(-1) A = 0.019348 B = 0.002785 C = 0.002580 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1446.860613 B =10053.229997 C =10849.331923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 O -0.383 6.383 3 C 0.539 3.461 4 O -0.620 6.620 5 C -1.039 5.039 6 S 1.463 4.537 7 O -0.925 6.925 8 C -0.402 4.402 9 C -0.063 4.063 10 C -0.118 4.118 11 C -0.060 4.060 12 C 0.010 3.990 13 C -0.118 4.118 14 C -0.086 4.086 15 C -0.160 4.160 16 C 0.111 3.889 17 F -0.129 7.129 18 C -0.102 4.102 19 C -0.085 4.085 20 O -0.540 6.540 21 Si 0.928 3.072 22 H -0.249 1.249 23 H -0.250 1.250 24 H -0.238 1.238 25 C -0.119 4.119 26 C -0.063 4.063 27 H 0.043 0.957 28 H 0.042 0.958 29 H 0.075 0.925 30 H 0.114 0.886 31 H 0.132 0.868 32 H 0.127 0.873 33 H 0.135 0.865 34 H 0.135 0.865 35 H 0.136 0.864 36 H 0.092 0.908 37 H 0.379 0.621 38 H 0.117 0.883 39 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 18.246 -0.608 4.376 18.773 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.051 4.051 2 O -0.303 6.303 3 C 0.404 3.596 4 O -0.525 6.525 5 C -1.166 5.166 6 S 1.664 4.336 7 O -0.921 6.921 8 C -0.494 4.494 9 C -0.083 4.083 10 C -0.137 4.137 11 C -0.060 4.060 12 C 0.010 3.990 13 C -0.136 4.136 14 C -0.104 4.104 15 C -0.178 4.178 16 C 0.092 3.908 17 F -0.107 7.107 18 C -0.103 4.103 19 C -0.195 4.195 20 O -0.346 6.346 21 Si 0.748 3.252 22 H -0.173 1.173 23 H -0.174 1.174 24 H -0.161 1.161 25 C -0.138 4.138 26 C -0.081 4.081 27 H 0.062 0.938 28 H 0.060 0.940 29 H 0.094 0.906 30 H 0.132 0.868 31 H 0.150 0.850 32 H 0.145 0.855 33 H 0.153 0.847 34 H 0.153 0.847 35 H 0.154 0.846 36 H 0.110 0.890 37 H 0.227 0.773 38 H 0.135 0.865 39 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 18.265 0.057 3.799 18.656 hybrid contribution 0.135 -1.826 -1.510 2.373 sum 18.400 -1.769 2.289 18.626 Atomic orbital electron populations 1.22392 0.81214 1.00637 1.00831 1.86265 1.19832 1.36536 1.87652 1.17870 0.87880 0.79625 0.74240 1.90678 1.67679 1.35000 1.59168 1.26390 0.99806 1.19429 1.71004 1.66751 0.75454 0.85136 1.06241 1.94519 1.82339 1.79023 1.36230 1.28822 1.21994 0.98704 0.99868 1.20742 0.91823 0.98567 0.97124 1.21274 0.96265 0.95907 1.00227 1.18589 0.90373 0.96067 1.00964 1.18551 0.92057 0.93279 0.95147 1.21325 0.96166 0.96099 1.00051 1.20964 0.92433 0.99142 0.97882 1.21143 1.01175 0.93445 1.02085 1.17405 0.85740 0.88962 0.98711 1.91479 1.65631 1.69583 1.84036 1.19293 0.91573 0.96312 1.03084 1.24690 1.02431 0.86383 1.05995 1.86479 1.75416 1.16218 1.56447 0.86107 0.81719 0.82385 0.74968 1.17259 1.17353 1.16055 1.21231 0.93233 0.99086 1.00248 1.21225 0.94984 0.96219 0.95705 0.93807 0.93968 0.90643 0.86812 0.84990 0.85524 0.84741 0.84715 0.84622 0.88986 0.77336 0.86475 0.85664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.95 10.45 101.05 1.06 2.01 16 2 O -0.38 -10.29 10.47 -42.03 -0.44 -10.73 16 3 C 0.54 16.08 7.63 31.40 0.24 16.32 16 4 O -0.62 -19.38 16.06 -19.47 -0.31 -19.70 16 5 C -1.04 -29.31 8.46 31.40 0.27 -29.04 16 6 S 1.46 36.25 12.77 -107.50 -1.37 34.88 16 7 O -0.93 -29.61 18.25 -35.23 -0.64 -30.26 16 8 C -0.40 -8.39 5.68 -39.52 -0.22 -8.62 16 9 C -0.06 -1.06 9.74 -39.63 -0.39 -1.44 16 10 C -0.12 -1.79 7.58 -39.26 -0.30 -2.09 16 11 C -0.06 -0.93 4.62 -104.90 -0.48 -1.41 16 12 C 0.01 0.14 5.40 -104.90 -0.57 -0.43 16 13 C -0.12 -1.35 9.62 -39.24 -0.38 -1.72 16 14 C -0.09 -0.82 10.03 -39.64 -0.40 -1.22 16 15 C -0.16 -1.65 10.02 -39.45 -0.40 -2.04 16 16 C 0.11 1.41 6.61 -39.47 -0.26 1.15 16 17 F -0.13 -1.71 13.98 2.25 0.03 -1.68 16 18 C -0.10 -1.37 4.61 -104.23 -0.48 -1.85 16 19 C -0.09 -1.08 2.00 36.01 0.07 -1.01 16 20 O -0.54 -6.15 12.67 -35.23 -0.45 -6.59 16 21 Si 0.93 11.25 26.39 -169.99 -4.49 6.76 16 22 H -0.25 -3.37 7.11 56.52 0.40 -2.97 16 23 H -0.25 -2.91 7.11 56.52 0.40 -2.51 16 24 H -0.24 -2.94 6.08 56.52 0.34 -2.60 16 25 C -0.12 -2.04 9.62 -39.26 -0.38 -2.41 16 26 C -0.06 -1.30 8.92 -39.63 -0.35 -1.65 16 27 H 0.04 0.87 8.13 -51.93 -0.42 0.45 16 28 H 0.04 0.89 8.13 -51.93 -0.42 0.47 16 29 H 0.08 1.25 8.14 -51.94 -0.42 0.83 16 30 H 0.11 3.15 6.08 -45.46 -0.28 2.88 16 31 H 0.13 1.74 8.06 -52.49 -0.42 1.31 16 32 H 0.13 1.67 7.73 -52.49 -0.41 1.27 16 33 H 0.13 1.37 8.06 -52.48 -0.42 0.95 16 34 H 0.13 0.87 8.06 -52.49 -0.42 0.45 16 35 H 0.14 1.07 8.06 -52.48 -0.42 0.64 16 36 H 0.09 1.22 4.94 -51.93 -0.26 0.97 16 37 H 0.38 2.62 8.74 45.56 0.40 3.02 16 38 H 0.12 1.74 8.06 -52.48 -0.42 1.32 16 39 H 0.13 2.83 6.48 -52.49 -0.34 2.49 16 LS Contribution 350.55 15.07 5.28 5.28 Total: -1.00 -40.06 350.55 -8.47 -48.54 By element: Atomic # 1 Polarization: 12.07 SS G_CDS: -3.12 Total: 8.96 kcal Atomic # 6 Polarization: -32.50 SS G_CDS: -2.97 Total: -35.47 kcal Atomic # 8 Polarization: -65.43 SS G_CDS: -1.84 Total: -67.27 kcal Atomic # 9 Polarization: -1.71 SS G_CDS: 0.03 Total: -1.68 kcal Atomic # 14 Polarization: 11.25 SS G_CDS: -4.49 Total: 6.76 kcal Atomic # 16 Polarization: 36.25 SS G_CDS: -1.37 Total: 34.88 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -40.06 -8.47 -48.54 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_13569790_11652898.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.078 kcal (2) G-P(sol) polarization free energy of solvation -40.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.143 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.472 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.536 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds