Wall clock time and date at job start Mon Mar 8 2021 05:54:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47312 * 2 1 4 4 C 1.50703 * 109.47409 * 120.00500 * 2 1 3 5 5 C 1.38226 * 120.06999 * 294.96951 * 4 2 1 6 6 F 1.35097 * 119.96604 * 0.04553 * 5 4 2 7 7 C 1.38566 * 120.06648 * 180.02562 * 5 4 2 8 8 C 1.38258 * 120.22009 * 0.02562 * 7 5 4 9 9 C 1.38061 * 120.14632 * 359.74070 * 8 7 5 10 10 C 1.39317 * 119.92608 * 0.50889 * 9 8 7 11 11 C 1.48389 * 120.10660 * 179.76820 * 10 9 8 12 12 C 1.39337 * 120.12079 * 303.58682 * 11 10 9 13 13 C 1.38022 * 119.87795 * 179.97438 * 12 11 10 14 14 C 1.38323 * 120.12262 * 359.97438 * 13 12 11 15 15 C 1.50699 * 119.87920 * 180.02562 * 14 13 12 16 16 H 1.08994 * 112.90837 * 348.75299 * 15 14 13 17 17 C 1.53780 * 113.61164 * 120.00031 * 15 14 13 18 18 C 1.53780 * 87.08046 * 139.98182 * 17 15 14 19 19 H 1.09001 * 113.61505 * 89.11358 * 18 17 15 20 20 O 1.42895 * 113.61427 * 220.01682 * 18 17 15 21 21 C 1.53777 * 87.08079 * 334.56507 * 18 17 15 22 22 C 1.38324 * 120.24027 * 0.27415 * 14 13 12 23 23 C 1.38023 * 120.12196 * 359.45419 * 22 14 13 24 24 H 0.96698 * 114.00260 * 183.25099 * 1 2 3 25 25 H 1.09005 * 109.46713 * 240.00222 * 2 1 3 26 26 H 1.48506 * 109.99992 * 53.93983 * 3 2 1 27 27 H 1.48500 * 110.00138 * 175.25543 * 3 2 1 28 28 H 1.08000 * 119.88965 * 179.97438 * 7 5 4 29 29 H 1.07995 * 119.92801 * 179.97438 * 8 7 5 30 30 H 1.07995 * 120.03116 * 180.25734 * 9 8 7 31 31 H 1.08003 * 120.06293 * 359.95618 * 12 11 10 32 32 H 1.08005 * 119.94261 * 180.02562 * 13 12 11 33 33 H 1.09005 * 113.61677 * 254.52617 * 17 15 14 34 34 H 1.08996 * 113.61660 * 25.43409 * 17 15 14 35 35 H 0.96705 * 113.99864 * 179.97438 * 20 18 17 36 36 H 1.09001 * 113.61796 * 270.88407 * 21 18 17 37 37 H 1.08999 * 113.69168 * 139.99111 * 21 18 17 38 38 H 1.08002 * 119.93598 * 179.70173 * 22 14 13 39 39 H 1.07997 * 120.06078 * 180.25402 * 23 22 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6862 -0.1821 2.4839 6 9 0.9946 0.9719 2.6063 7 6 2.1486 -0.8352 3.6152 8 6 2.8570 -2.0166 3.4960 9 6 3.1028 -2.5548 2.2486 10 6 2.6452 -1.9006 1.1069 11 6 2.9116 -2.4728 -0.2361 12 6 4.2197 -2.7377 -0.6363 13 6 4.4618 -3.2705 -1.8863 14 6 3.4086 -3.5419 -2.7410 15 6 3.6791 -4.1242 -4.1044 16 1 4.7353 -4.1032 -4.3728 17 6 3.0122 -5.4907 -4.3339 18 6 2.6952 -5.0085 -5.7593 19 1 3.4825 -5.2291 -6.4802 20 8 1.3974 -5.3923 -6.2181 21 6 2.7532 -3.5760 -5.2031 22 6 2.1084 -3.2762 -2.3508 23 6 1.8545 -2.7486 -1.1009 24 1 -0.3933 -0.8819 0.0501 25 1 1.7922 -0.5138 -0.8901 26 1 1.4449 2.5091 1.1281 27 1 3.5304 1.7717 0.1154 28 1 1.9558 -0.4196 4.5932 29 1 3.2156 -2.5214 4.3808 30 1 3.6527 -3.4798 2.1579 31 1 5.0428 -2.5263 0.0303 32 1 5.4753 -3.4766 -2.1975 33 1 3.7096 -6.3279 -4.3013 34 1 2.1259 -5.6526 -3.7205 35 1 1.1921 -5.0914 -7.1139 36 1 1.7961 -3.2144 -4.8272 37 1 3.2410 -2.8662 -5.8711 38 1 1.2902 -3.4856 -3.0239 39 1 0.8387 -2.5453 -0.7956 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_13569790_13419902.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 05:54:39 Heat of formation + Delta-G solvation = -45.532389 kcal Electronic energy + Delta-G solvation = -24030.225732 eV Core-core repulsion = 20398.427621 eV Total energy + Delta-G solvation = -3631.798111 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.115 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -50.01053 -41.52072 -40.57803 -38.94893 -37.58839 -36.14633 -33.72050 -32.33264 -31.91543 -30.30592 -27.03943 -26.79554 -26.05118 -23.97156 -23.56801 -22.65350 -21.93983 -20.33608 -19.12027 -18.69943 -18.34877 -17.64836 -17.03937 -16.97920 -16.63975 -16.56176 -16.15472 -15.78360 -15.44644 -15.41388 -15.11461 -14.72350 -14.52530 -14.40772 -14.06120 -13.89075 -13.64251 -13.45862 -13.31432 -13.12870 -12.75711 -12.62830 -12.31741 -12.11875 -11.82582 -11.78666 -11.46179 -11.44017 -11.07966 -10.81858 -10.28745 -9.95706 -9.78938 -9.31936 -4.79983 -0.30179 -0.01690 0.35757 0.40476 1.42767 1.73271 2.13457 2.35936 2.63800 3.06923 3.15461 3.35863 3.46683 3.50307 3.56174 3.75336 3.81346 3.81795 3.84993 3.87538 3.93175 3.98849 4.02414 4.17439 4.33128 4.36666 4.44051 4.54411 4.57368 4.69891 4.71521 4.78056 4.88571 4.89963 4.95686 5.01346 5.04935 5.12381 5.19572 5.25393 5.35715 5.47525 5.60926 5.72566 5.89415 6.51469 6.64808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.082 4.082 3 Si 0.735 3.265 4 C -0.147 4.147 5 C 0.111 3.889 6 F -0.122 7.122 7 C -0.153 4.153 8 C -0.082 4.082 9 C -0.117 4.117 10 C -0.005 4.005 11 C -0.060 4.060 12 C -0.099 4.099 13 C -0.112 4.112 14 C -0.060 4.060 15 C -0.075 4.075 16 H 0.102 0.898 17 C -0.120 4.120 18 C 0.075 3.925 19 H 0.083 0.917 20 O -0.560 6.560 21 C -0.163 4.163 22 C -0.112 4.112 23 C -0.098 4.098 24 H 0.362 0.638 25 H 0.085 0.915 26 H -0.238 1.238 27 H -0.255 1.255 28 H 0.140 0.860 29 H 0.139 0.861 30 H 0.135 0.865 31 H 0.126 0.874 32 H 0.127 0.873 33 H 0.077 0.923 34 H 0.093 0.907 35 H 0.380 0.620 36 H 0.095 0.905 37 H 0.073 0.927 38 H 0.129 0.871 39 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.617 -2.089 -2.910 4.437 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.190 4.190 3 Si 0.632 3.368 4 C -0.149 4.149 5 C 0.092 3.908 6 F -0.100 7.100 7 C -0.172 4.172 8 C -0.100 4.100 9 C -0.135 4.135 10 C -0.005 4.005 11 C -0.060 4.060 12 C -0.116 4.116 13 C -0.130 4.130 14 C -0.060 4.060 15 C -0.094 4.094 16 H 0.120 0.880 17 C -0.157 4.157 18 C 0.016 3.984 19 H 0.101 0.899 20 O -0.365 6.365 21 C -0.201 4.201 22 C -0.130 4.130 23 C -0.116 4.116 24 H 0.209 0.791 25 H 0.103 0.897 26 H -0.162 1.162 27 H -0.179 1.179 28 H 0.158 0.842 29 H 0.157 0.843 30 H 0.153 0.847 31 H 0.144 0.856 32 H 0.145 0.855 33 H 0.095 0.905 34 H 0.111 0.889 35 H 0.227 0.773 36 H 0.113 0.887 37 H 0.092 0.908 38 H 0.147 0.853 39 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 3.078 -1.060 -1.902 3.771 hybrid contribution -0.047 -1.182 0.398 1.248 sum 3.031 -2.242 -1.504 4.059 Atomic orbital electron populations 1.86800 1.16614 1.33059 1.96884 1.25332 0.84920 1.13684 0.95099 0.93725 0.78576 0.76082 0.88408 1.20365 1.03290 0.96724 0.94497 1.17494 0.95367 0.84167 0.93797 1.91501 1.76712 1.45608 1.96187 1.21292 1.00748 0.97062 0.98077 1.21056 0.96484 0.94442 0.98031 1.21335 1.00444 1.00431 0.91303 1.18504 0.96414 0.92670 0.92936 1.18630 0.93851 1.00886 0.92679 1.21179 0.95533 0.98428 0.96509 1.21013 0.99026 0.99311 0.93642 1.19725 0.93185 0.97864 0.95237 1.21333 1.00039 0.96361 0.91623 0.87962 1.23171 1.00957 0.96360 0.95199 1.23351 0.85490 0.94232 0.95354 0.89876 1.86535 1.33473 1.80060 1.36476 1.23840 1.00616 0.97748 0.97860 1.20987 0.96645 0.99285 0.96067 1.21139 0.98267 0.98650 0.93497 0.79080 0.89666 1.16204 1.17932 0.84211 0.84306 0.84705 0.85646 0.85528 0.90481 0.88861 0.77275 0.88699 0.90803 0.85325 0.86003 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.07 12.55 -35.23 -0.44 -1.51 16 2 C -0.08 -0.15 1.96 36.01 0.07 -0.08 16 3 Si 0.74 1.55 31.29 -169.99 -5.32 -3.77 16 4 C -0.15 -0.36 4.57 -104.22 -0.48 -0.84 16 5 C 0.11 0.37 6.62 -39.46 -0.26 0.11 16 6 F -0.12 -0.64 13.91 2.25 0.03 -0.61 16 7 C -0.15 -0.21 10.02 -39.45 -0.40 -0.60 16 8 C -0.08 0.01 10.03 -39.64 -0.40 -0.39 16 9 C -0.12 -0.03 9.62 -39.24 -0.38 -0.40 16 10 C 0.00 -0.01 5.40 -104.91 -0.57 -0.57 16 11 C -0.06 -0.05 4.60 -104.90 -0.48 -0.53 16 12 C -0.10 -0.02 9.62 -39.25 -0.38 -0.39 16 13 C -0.11 0.04 9.69 -39.63 -0.38 -0.34 16 14 C -0.06 0.02 5.29 -104.56 -0.55 -0.53 16 15 C -0.08 0.11 3.98 -90.96 -0.36 -0.25 16 16 H 0.10 -0.25 8.09 -51.93 -0.42 -0.67 16 17 C -0.12 0.09 7.38 -25.92 -0.19 -0.10 16 18 C 0.07 -0.09 5.21 -25.92 -0.14 -0.22 16 19 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 20 O -0.56 -0.10 13.67 -35.23 -0.48 -0.58 16 21 C -0.16 0.26 7.28 -25.92 -0.19 0.07 16 22 C -0.11 0.01 8.60 -39.63 -0.34 -0.33 16 23 C -0.10 -0.02 7.62 -39.25 -0.30 -0.32 16 24 H 0.36 -0.31 8.42 45.56 0.38 0.07 16 25 H 0.09 0.07 5.00 -51.93 -0.26 -0.19 16 26 H -0.24 -1.20 6.05 56.52 0.34 -0.86 16 27 H -0.25 -0.97 7.11 56.52 0.40 -0.56 16 28 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 29 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 30 H 0.14 -0.19 8.06 -52.49 -0.42 -0.62 16 31 H 0.13 -0.12 8.06 -52.48 -0.42 -0.54 16 32 H 0.13 -0.26 8.05 -52.48 -0.42 -0.68 16 33 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.09 0.03 7.73 -51.93 -0.40 -0.37 16 35 H 0.38 -1.44 9.12 45.56 0.42 -1.02 16 36 H 0.09 -0.10 6.29 -51.93 -0.33 -0.42 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 38 H 0.13 -0.11 6.63 -52.49 -0.35 -0.46 16 39 H 0.12 -0.11 7.13 -52.49 -0.37 -0.49 16 LS Contribution 325.18 15.07 4.90 4.90 Total: 0.00 -6.08 325.18 -11.00 -17.08 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -3.97 Total: -9.79 kcal Atomic # 6 Polarization: 0.00 SS G_CDS: -5.72 Total: -5.72 kcal Atomic # 8 Polarization: -1.17 SS G_CDS: -0.92 Total: -2.09 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.03 Total: -0.61 kcal Atomic # 14 Polarization: 1.55 SS G_CDS: -5.32 Total: -3.77 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -6.08 -11.00 -17.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_13569790_13419902.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.450 kcal (2) G-P(sol) polarization free energy of solvation -6.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.999 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.532 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds