Wall clock time and date at job start Mon Mar 8 2021 08:04:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32597 * 1 3 3 C 1.47776 * 119.99791 * 2 1 4 4 C 1.39555 * 120.08411 * 180.02562 * 3 2 1 5 5 C 1.37880 * 119.91545 * 179.97438 * 4 3 2 6 6 C 1.38835 * 120.08232 * 359.97438 * 5 4 3 7 7 O 1.35865 * 119.91296 * 180.02562 * 6 5 4 8 8 C 1.42899 * 116.99998 * 0.02562 * 7 6 5 9 9 F 1.39898 * 109.46823 * 299.99972 * 8 7 6 10 10 F 1.39905 * 109.47259 * 59.99728 * 8 7 6 11 11 C 1.38882 * 120.17727 * 0.04038 * 6 5 4 12 12 C 1.50696 * 119.96218 * 179.97438 * 11 6 5 13 13 O 1.42900 * 109.46984 * 285.00514 * 12 11 6 14 14 Si 1.86295 * 109.47479 * 165.00613 * 12 11 6 15 15 H 1.48498 * 109.46989 * 59.99653 * 14 12 11 16 16 H 1.48494 * 109.47513 * 180.02562 * 14 12 11 17 17 H 1.48503 * 109.46934 * 300.00279 * 14 12 11 18 18 C 1.37839 * 120.08017 * 359.70819 * 11 6 5 19 19 Si 1.86801 * 119.99996 * 179.97438 * 2 1 3 20 20 C 1.86300 * 109.46957 * 359.97438 * 19 2 1 21 21 C 1.86298 * 109.47026 * 120.00101 * 19 2 1 22 22 C 1.86301 * 109.47053 * 240.00115 * 19 2 1 23 23 H 1.08002 * 120.00233 * 180.02562 * 1 2 3 24 24 H 1.08005 * 119.99999 * 359.72499 * 1 2 3 25 25 H 1.08008 * 120.04338 * 359.97438 * 4 3 2 26 26 H 1.07994 * 119.95739 * 180.02562 * 5 4 3 27 27 H 1.08997 * 109.47460 * 179.97438 * 8 7 6 28 28 H 1.09005 * 109.46792 * 45.00121 * 12 11 6 29 29 H 0.96703 * 113.99991 * 300.00157 * 13 12 11 30 30 H 1.07996 * 120.04068 * 180.29552 * 18 11 6 31 31 H 1.09003 * 109.46704 * 60.00197 * 20 19 2 32 32 H 1.09003 * 109.46993 * 180.02562 * 20 19 2 33 33 H 1.08999 * 109.47326 * 299.99568 * 20 19 2 34 34 H 1.08998 * 109.47156 * 60.00082 * 21 19 2 35 35 H 1.08995 * 109.46874 * 180.02562 * 21 19 2 36 36 H 1.08997 * 109.46887 * 299.99740 * 21 19 2 37 37 H 1.09004 * 109.47199 * 59.99984 * 22 19 2 38 38 H 1.08998 * 109.47265 * 180.02562 * 22 19 2 39 39 H 1.09007 * 109.47146 * 300.00054 * 22 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3260 0.0000 0.0000 3 6 2.0648 1.2798 0.0000 4 6 3.4603 1.2819 -0.0005 5 6 4.1462 2.4780 -0.0011 6 6 3.4502 3.6793 -0.0016 7 8 4.1295 4.8559 -0.0027 8 6 5.5565 4.7812 -0.0037 9 9 5.9885 4.0987 1.1385 10 9 5.9868 4.0976 -1.1460 11 6 2.0613 3.6815 -0.0008 12 6 1.3107 4.9882 -0.0008 13 8 1.3768 5.5754 1.3003 14 14 -0.4700 4.6816 -0.4540 15 1 -1.0812 3.7596 0.5368 16 1 -1.2095 5.9693 -0.4546 17 1 -0.5386 4.0712 -1.8061 18 6 1.3686 2.4898 -0.0055 19 14 2.2600 -1.6177 0.0007 20 6 1.0493 -3.0337 0.0021 21 6 3.3310 -1.7171 -1.5203 22 6 3.3310 -1.7157 1.5219 23 1 -0.5400 -0.9353 0.0004 24 1 -0.5400 0.9353 0.0045 25 1 4.0025 0.3477 -0.0005 26 1 5.2261 2.4804 -0.0019 27 1 5.9731 5.7884 -0.0050 28 1 1.7595 5.6649 -0.7280 29 1 0.9949 5.0269 1.9992 30 1 0.2887 2.4922 -0.0096 31 1 0.4223 -2.9765 -0.8877 32 1 1.5943 -3.9777 0.0030 33 1 0.4230 -2.9755 0.8923 34 1 4.0393 -0.8886 -1.5207 35 1 3.8757 -2.6612 -1.5201 36 1 2.7044 -1.6598 -2.4103 37 1 2.7043 -1.6576 2.4119 38 1 3.8764 -2.6595 1.5222 39 1 4.0394 -0.8872 1.5216 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419796.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:04:24 Heat of formation + Delta-G solvation = -173.827574 kcal Electronic energy + Delta-G solvation = -23327.497415 eV Core-core repulsion = 19608.917491 eV Total energy + Delta-G solvation = -3718.579925 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 302.106 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -50.36194 -48.34317 -41.33000 -38.87914 -37.70105 -34.59922 -32.90327 -30.24348 -29.63805 -28.44909 -28.44227 -27.21703 -26.69608 -24.18040 -22.81116 -20.67621 -20.11122 -19.01104 -18.91958 -17.98563 -17.32644 -17.12908 -16.33002 -15.96691 -15.73354 -15.41123 -15.07406 -14.90251 -14.83353 -14.66341 -14.64525 -14.24729 -14.17704 -14.08624 -13.80191 -13.59848 -13.52832 -13.38699 -13.19591 -13.10562 -13.08833 -12.89694 -12.45750 -12.19366 -12.00592 -11.73181 -11.42324 -10.96439 -10.79770 -10.60070 -10.38409 -10.05841 -8.91350 -0.11688 0.16808 1.11229 1.23331 1.36622 1.49160 1.52757 1.64550 1.78643 1.87773 2.03974 2.45869 2.49247 2.77432 3.27627 3.45266 3.60716 3.65479 3.74199 3.78738 4.04515 4.16172 4.33949 4.54988 4.63449 4.65282 4.69552 4.69892 4.72327 4.73123 4.76855 4.80753 4.96144 5.12568 5.25620 5.36264 5.40705 5.51235 5.51944 5.53549 5.78338 6.02108 6.57580 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.367 4.367 3 C -0.050 4.050 4 C -0.080 4.080 5 C -0.185 4.185 6 C 0.129 3.871 7 O -0.308 6.308 8 C 0.410 3.590 9 F -0.198 7.198 10 F -0.199 7.199 11 C -0.132 4.132 12 C -0.072 4.072 13 O -0.533 6.533 14 Si 0.944 3.056 15 H -0.251 1.251 16 H -0.250 1.250 17 H -0.247 1.247 18 C -0.097 4.097 19 Si 1.045 2.955 20 C -0.449 4.449 21 C -0.451 4.451 22 C -0.451 4.451 23 H 0.110 0.890 24 H 0.092 0.908 25 H 0.137 0.863 26 H 0.138 0.862 27 H 0.183 0.817 28 H 0.118 0.882 29 H 0.374 0.626 30 H 0.133 0.867 31 H 0.071 0.929 32 H 0.073 0.927 33 H 0.071 0.929 34 H 0.070 0.930 35 H 0.072 0.928 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.072 0.928 39 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.371 -1.466 -0.165 1.521 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.408 4.408 3 C -0.050 4.050 4 C -0.097 4.097 5 C -0.204 4.204 6 C 0.085 3.915 7 O -0.225 6.225 8 C 0.320 3.680 9 F -0.179 7.179 10 F -0.181 7.181 11 C -0.133 4.133 12 C -0.182 4.182 13 O -0.337 6.337 14 Si 0.766 3.234 15 H -0.175 1.175 16 H -0.173 1.173 17 H -0.170 1.170 18 C -0.115 4.115 19 Si 1.237 2.763 20 C -0.557 4.557 21 C -0.558 4.558 22 C -0.558 4.558 23 H 0.128 0.872 24 H 0.110 0.890 25 H 0.154 0.846 26 H 0.156 0.844 27 H 0.200 0.800 28 H 0.136 0.864 29 H 0.221 0.779 30 H 0.151 0.849 31 H 0.090 0.910 32 H 0.092 0.908 33 H 0.090 0.910 34 H 0.089 0.911 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.091 0.909 39 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges -1.027 -0.901 -0.728 1.548 hybrid contribution 0.474 -0.475 0.386 0.774 sum -0.553 -1.376 -0.341 1.522 Atomic orbital electron populations 1.24409 0.95799 1.02072 0.95178 1.28034 1.01120 1.08062 1.03599 1.18829 0.92787 0.92782 1.00648 1.21231 0.93338 0.97802 0.97352 1.21539 1.00940 0.91907 1.05963 1.18633 0.91041 0.83899 0.97890 1.86696 1.17959 1.29836 1.88044 1.23448 0.79218 0.93593 0.71788 1.93107 1.89558 1.83238 1.52031 1.93108 1.89631 1.83247 1.52074 1.19566 0.90838 0.96199 1.06715 1.24868 1.09879 0.93914 0.89572 1.86555 1.84617 1.46587 1.15955 0.85805 0.75178 0.80985 0.81399 1.17487 1.17325 1.17013 1.21170 0.99864 0.91065 0.99359 0.78411 0.66506 0.63533 0.67804 1.26134 1.11328 1.13662 1.04613 1.26208 1.09722 1.04658 1.15233 1.26210 1.09709 1.04661 1.15222 0.87212 0.88950 0.84588 0.84418 0.80026 0.86385 0.77945 0.84924 0.91005 0.90761 0.91007 0.91055 0.90907 0.90940 0.90942 0.90909 0.91066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.10 13.39 28.83 0.39 0.49 16 2 C -0.37 0.07 4.70 -37.59 -0.18 -0.11 16 3 C -0.05 -0.07 5.84 -105.00 -0.61 -0.68 16 4 C -0.08 -0.10 8.70 -39.22 -0.34 -0.44 16 5 C -0.19 -0.40 8.24 -39.49 -0.33 -0.72 16 6 C 0.13 0.34 6.46 -39.12 -0.25 0.09 16 7 O -0.31 -0.58 9.75 -19.32 -0.19 -0.77 16 8 C 0.41 -0.23 5.98 101.05 0.60 0.37 16 9 F -0.20 -0.22 15.57 2.25 0.04 -0.19 16 10 F -0.20 -0.17 15.57 2.25 0.04 -0.14 16 11 C -0.13 -0.26 5.27 -104.53 -0.55 -0.81 16 12 C -0.07 -0.07 2.37 36.00 0.09 0.02 16 13 O -0.53 -0.77 12.88 -35.23 -0.45 -1.22 16 14 Si 0.94 0.07 25.48 -169.99 -4.33 -4.26 16 15 H -0.25 0.10 6.74 56.52 0.38 0.48 16 16 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 17 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 18 C -0.10 -0.15 8.00 -39.22 -0.31 -0.46 16 19 Si 1.05 -2.25 10.79 -169.99 -1.83 -4.09 16 20 C -0.45 0.87 7.86 101.05 0.79 1.66 16 21 C -0.45 0.59 8.65 101.05 0.87 1.47 16 22 C -0.45 0.60 8.65 101.05 0.87 1.47 16 23 H 0.11 -0.26 7.05 -52.49 -0.37 -0.63 16 24 H 0.09 -0.08 6.03 -52.48 -0.32 -0.40 16 25 H 0.14 -0.11 3.69 -52.48 -0.19 -0.30 16 26 H 0.14 0.21 5.07 -52.49 -0.27 -0.05 16 27 H 0.18 -0.91 8.14 -51.93 -0.42 -1.34 16 28 H 0.12 0.07 7.82 -51.93 -0.41 -0.33 16 29 H 0.37 -0.67 8.70 45.56 0.40 -0.27 16 30 H 0.13 0.02 2.98 -52.49 -0.16 -0.14 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 32 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 33 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 34 H 0.07 -0.08 6.57 -51.93 -0.34 -0.42 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 36 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 37 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 38 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 39 H 0.07 -0.08 6.57 -51.92 -0.34 -0.42 16 LS Contribution 323.48 15.07 4.87 4.87 Total: 0.00 -5.73 323.48 -4.95 -10.67 By element: Atomic # 1 Polarization: -3.10 SS G_CDS: -4.13 Total: -7.23 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: 1.04 Total: 2.35 kcal Atomic # 8 Polarization: -1.35 SS G_CDS: -0.64 Total: -1.99 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.07 Total: -0.32 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: -6.17 Total: -8.35 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -5.73 -4.95 -10.67 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419796.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -163.154 kcal (2) G-P(sol) polarization free energy of solvation -5.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -10.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.828 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds