Wall clock time and date at job start Mon Mar 8 2021 10:05:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32595 * 1 3 3 C 1.47776 * 119.99866 * 2 1 4 4 C 1.39560 * 120.08033 * 180.02562 * 3 2 1 5 5 C 1.37882 * 119.90733 * 179.70330 * 4 3 2 6 6 C 1.38836 * 120.08776 * 0.52470 * 5 4 3 7 7 O 1.35863 * 119.91570 * 179.76499 * 6 5 4 8 8 C 1.42908 * 116.99970 * 359.73090 * 7 6 5 9 9 C 1.50692 * 109.47246 * 179.97438 * 8 7 6 10 10 C 1.38184 * 119.61840 * 0.02562 * 9 8 7 11 11 C 1.38675 * 119.16617 * 179.97438 * 10 9 8 12 12 C 1.38631 * 118.41792 * 359.97438 * 11 10 9 13 13 C 1.38221 * 119.16077 * 0.25627 * 12 11 10 14 14 N 1.31861 * 120.76518 * 359.45246 * 13 12 11 15 15 C 1.38886 * 120.17076 * 359.49249 * 6 5 4 16 16 C 1.50696 * 119.95293 * 180.25277 * 15 6 5 17 17 O 1.42901 * 109.47217 * 284.99918 * 16 15 6 18 18 Si 1.86298 * 109.46851 * 165.00344 * 16 15 6 19 19 H 1.48500 * 109.47263 * 59.99802 * 18 16 15 20 20 H 1.48505 * 109.47370 * 179.97438 * 18 16 15 21 21 H 1.48499 * 109.47068 * 299.99881 * 18 16 15 22 22 C 1.37830 * 120.08533 * 0.23195 * 15 6 5 23 23 Si 1.86796 * 120.00045 * 180.02562 * 2 1 3 24 24 C 1.86295 * 109.47298 * 240.00020 * 23 2 1 25 25 C 1.86302 * 109.47106 * 359.97438 * 23 2 1 26 26 C 1.86302 * 109.47325 * 119.99625 * 23 2 1 27 27 H 1.07995 * 120.00399 * 180.02562 * 1 2 3 28 28 H 1.08006 * 119.99788 * 359.97438 * 1 2 3 29 29 H 1.07995 * 120.04709 * 359.97438 * 4 3 2 30 30 H 1.08002 * 119.95567 * 180.29580 * 5 4 3 31 31 H 1.09000 * 109.46702 * 59.99566 * 8 7 6 32 32 H 1.08998 * 109.46700 * 299.99515 * 8 7 6 33 33 H 1.08006 * 120.42016 * 359.97438 * 10 9 8 34 34 H 1.07997 * 120.79161 * 180.02562 * 11 10 9 35 35 H 1.08002 * 120.41548 * 179.97438 * 12 11 10 36 36 H 1.08002 * 119.62066 * 179.74470 * 13 12 11 37 37 H 1.08995 * 109.47506 * 44.99853 * 16 15 6 38 38 H 0.96695 * 114.00288 * 60.00079 * 17 16 15 39 39 H 1.07993 * 120.04239 * 179.97438 * 22 15 6 40 40 H 1.09001 * 109.47575 * 59.99501 * 24 23 2 41 41 H 1.08994 * 109.47169 * 180.02562 * 24 23 2 42 42 H 1.08999 * 109.46791 * 299.99886 * 24 23 2 43 43 H 1.09004 * 109.47309 * 59.99559 * 25 23 2 44 44 H 1.08999 * 109.47391 * 179.97438 * 25 23 2 45 45 H 1.09008 * 109.47198 * 300.00160 * 25 23 2 46 46 H 1.08999 * 109.46957 * 59.99996 * 26 23 2 47 47 H 1.08999 * 109.47388 * 180.02562 * 26 23 2 48 48 H 1.09004 * 109.46731 * 300.00221 * 26 23 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3259 0.0000 0.0000 3 6 2.0648 1.2798 0.0000 4 6 3.4604 1.2818 -0.0005 5 6 4.1462 2.4780 -0.0067 6 6 3.4502 3.6793 -0.0014 7 8 4.1295 4.8559 -0.0027 8 6 5.5566 4.7811 -0.0037 9 6 6.1326 6.1736 -0.0057 10 6 5.2836 7.2638 -0.0058 11 6 5.8237 8.5411 -0.0071 12 6 7.2037 8.6738 -0.0077 13 6 7.9896 7.5368 -0.0124 14 7 7.4412 6.3377 -0.0054 15 6 2.0614 3.6814 -0.0005 16 6 1.3109 4.9882 -0.0005 17 8 1.3769 5.5754 1.3006 18 14 -0.4699 4.6816 -0.4537 19 1 -1.0812 3.7596 0.5371 20 1 -1.2097 5.9692 -0.4531 21 1 -0.5386 4.0713 -1.8057 22 6 1.3686 2.4898 0.0000 23 14 2.2599 -1.6177 -0.0007 24 6 3.3310 -1.7171 1.5203 25 6 1.0493 -3.0337 -0.0006 26 6 3.3310 -1.7158 -1.5220 27 1 -0.5400 -0.9352 0.0004 28 1 -0.5400 0.9354 0.0004 29 1 4.0025 0.3477 -0.0005 30 1 5.2262 2.4804 -0.0120 31 1 5.8919 4.2483 -0.8935 32 1 5.8931 4.2497 0.8865 33 1 4.2127 7.1231 -0.0048 34 1 5.1846 9.4116 -0.0068 35 1 7.6588 9.6532 -0.0091 36 1 9.0655 7.6316 -0.0171 37 1 1.7596 5.6649 -0.7276 38 1 2.2763 5.7629 1.6024 39 1 0.2887 2.4922 0.0011 40 1 2.7044 -1.6597 2.4104 41 1 3.8763 -2.6608 1.5196 42 1 4.0393 -0.8886 1.5206 43 1 0.4222 -2.9758 -0.8903 44 1 1.5943 -3.9777 -0.0015 45 1 0.4229 -2.9762 0.8897 46 1 4.0393 -0.8873 -1.5216 47 1 3.8756 -2.6600 -1.5226 48 1 2.7042 -1.6577 -2.4119 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419802.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:05:07 Heat of formation + Delta-G solvation = -31.215163 kcal Electronic energy + Delta-G solvation = -27362.160874 eV Core-core repulsion = 23699.267328 eV Total energy + Delta-G solvation = -3662.893546 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 343.152 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.71621 -40.99324 -38.93942 -37.57775 -34.63054 -33.69946 -33.05982 -32.72937 -29.94598 -29.60952 -28.54607 -28.42875 -28.04548 -26.63184 -24.70259 -24.26420 -23.17300 -22.34536 -20.24963 -19.40007 -18.36432 -18.10386 -17.26128 -17.09867 -17.08338 -16.60954 -16.40713 -16.04499 -15.60089 -15.24760 -15.05909 -14.93768 -14.63124 -14.26289 -14.23540 -14.12802 -14.05700 -13.96357 -13.68828 -13.49876 -13.39582 -13.28854 -13.13096 -13.11650 -12.76154 -12.71501 -12.56549 -12.44381 -12.18724 -11.73428 -11.31447 -11.25878 -11.04152 -10.93448 -10.89725 -10.65520 -10.51918 -10.51501 -10.02974 -9.94343 -8.75918 -0.01455 0.03179 0.24185 0.25063 1.23416 1.31086 1.54393 1.57682 1.68108 1.78780 1.81392 2.00508 2.08691 2.52022 2.71574 2.86663 3.26444 3.58251 3.66902 3.78933 3.83982 3.85969 3.94572 4.00103 4.10491 4.13588 4.15714 4.21651 4.28745 4.41786 4.53707 4.54242 4.66582 4.67257 4.71403 4.72231 4.74483 4.74666 4.75110 4.81127 4.88243 5.02363 5.09601 5.16218 5.24635 5.35096 5.41630 5.45720 5.52281 5.55393 5.62215 5.69295 5.88800 6.26586 6.63333 6.87614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.366 4.366 3 C -0.059 4.059 4 C -0.079 4.079 5 C -0.198 4.198 6 C 0.139 3.861 7 O -0.313 6.313 8 C 0.114 3.886 9 C 0.120 3.880 10 C -0.150 4.150 11 C -0.073 4.073 12 C -0.171 4.171 13 C 0.106 3.894 14 N -0.480 5.480 15 C -0.138 4.138 16 C -0.082 4.082 17 O -0.537 6.537 18 Si 1.009 2.991 19 H -0.252 1.252 20 H -0.255 1.255 21 H -0.247 1.247 22 C -0.085 4.085 23 Si 1.045 2.955 24 C -0.450 4.450 25 C -0.450 4.450 26 C -0.450 4.450 27 H 0.109 0.891 28 H 0.093 0.907 29 H 0.134 0.866 30 H 0.134 0.866 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.144 0.856 34 H 0.138 0.862 35 H 0.138 0.862 36 H 0.161 0.839 37 H 0.076 0.924 38 H 0.368 0.632 39 H 0.132 0.868 40 H 0.071 0.929 41 H 0.071 0.929 42 H 0.070 0.930 43 H 0.071 0.929 44 H 0.073 0.927 45 H 0.071 0.929 46 H 0.070 0.930 47 H 0.071 0.929 48 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.241 -0.285 -0.950 1.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C -0.407 4.407 3 C -0.059 4.059 4 C -0.097 4.097 5 C -0.216 4.216 6 C 0.094 3.906 7 O -0.227 6.227 8 C 0.038 3.962 9 C -0.017 4.017 10 C -0.170 4.170 11 C -0.099 4.099 12 C -0.191 4.191 13 C -0.052 4.052 14 N -0.191 5.191 15 C -0.139 4.139 16 C -0.191 4.191 17 O -0.342 6.342 18 Si 0.829 3.171 19 H -0.176 1.176 20 H -0.179 1.179 21 H -0.171 1.171 22 C -0.103 4.103 23 Si 1.237 2.763 24 C -0.558 4.558 25 C -0.558 4.558 26 C -0.557 4.557 27 H 0.127 0.873 28 H 0.111 0.889 29 H 0.152 0.848 30 H 0.152 0.848 31 H 0.106 0.894 32 H 0.106 0.894 33 H 0.161 0.839 34 H 0.156 0.844 35 H 0.156 0.844 36 H 0.178 0.822 37 H 0.094 0.906 38 H 0.216 0.784 39 H 0.149 0.851 40 H 0.090 0.910 41 H 0.090 0.910 42 H 0.089 0.911 43 H 0.090 0.910 44 H 0.092 0.908 45 H 0.090 0.910 46 H 0.089 0.911 47 H 0.090 0.910 48 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.178 -0.957 -1.207 1.551 hybrid contribution 0.899 0.975 0.183 1.339 sum 1.077 0.018 -1.024 1.486 Atomic orbital electron populations 1.24403 0.95859 1.02047 0.95400 1.28009 1.01093 1.08072 1.03539 1.18792 0.92812 0.92722 1.01614 1.21219 0.93357 0.97808 0.97268 1.21223 1.00498 0.91899 1.08015 1.18695 0.90628 0.84298 0.96964 1.85874 1.19420 1.28504 1.88860 1.21157 0.77905 0.93581 1.03523 1.20576 0.89586 0.94351 0.97185 1.21934 1.02058 0.92561 1.00440 1.21697 0.95392 0.97793 0.95038 1.22248 0.94715 1.00731 1.01394 1.22738 1.00670 0.86885 0.94883 1.67180 1.12080 1.27294 1.12533 1.19502 0.90726 0.96368 1.07262 1.25184 1.13037 0.92082 0.88753 1.86692 1.32841 1.82815 1.31901 0.84552 0.72249 0.80703 0.79643 1.17566 1.17872 1.17069 1.21143 0.99893 0.91023 0.98236 0.78404 0.66502 0.63605 0.67746 1.26204 1.09694 1.04582 1.15273 1.26141 1.11358 1.13661 1.04622 1.26204 1.09691 1.04589 1.15249 0.87322 0.88904 0.84826 0.84790 0.89425 0.89373 0.83861 0.84397 0.84375 0.82162 0.90564 0.78424 0.85068 0.90955 0.90976 0.91080 0.91020 0.90813 0.91007 0.91067 0.90969 0.90964 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.03 13.39 28.83 0.39 0.41 16 2 C -0.37 -0.04 4.70 -37.59 -0.18 -0.22 16 3 C -0.06 -0.09 5.84 -105.00 -0.61 -0.70 16 4 C -0.08 -0.04 8.70 -39.22 -0.34 -0.38 16 5 C -0.20 -0.11 9.02 -39.49 -0.36 -0.47 16 6 C 0.14 0.20 6.62 -39.12 -0.26 -0.06 16 7 O -0.31 -0.19 7.47 -19.31 -0.14 -0.34 16 8 C 0.11 0.00 5.28 36.00 0.19 0.19 16 9 C 0.12 0.17 6.78 -82.59 -0.56 -0.39 16 10 C -0.15 -0.07 9.41 -39.44 -0.37 -0.44 16 11 C -0.07 0.03 10.18 -39.28 -0.40 -0.37 16 12 C -0.17 0.12 10.11 -39.44 -0.40 -0.28 16 13 C 0.11 0.04 11.18 -17.54 -0.20 -0.15 16 14 N -0.48 -1.09 10.27 -9.48 -0.10 -1.19 16 15 C -0.14 -0.28 5.27 -104.53 -0.55 -0.83 16 16 C -0.08 -0.12 2.33 36.00 0.08 -0.03 16 17 O -0.54 -1.13 12.65 -35.23 -0.45 -1.58 16 18 Si 1.01 1.30 25.74 -169.99 -4.38 -3.08 16 19 H -0.25 -0.44 6.73 56.52 0.38 -0.06 16 20 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 21 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 22 C -0.09 -0.18 8.00 -39.22 -0.31 -0.50 16 23 Si 1.05 -2.18 10.79 -169.99 -1.83 -4.01 16 24 C -0.45 0.61 8.65 101.05 0.87 1.48 16 25 C -0.45 0.78 7.86 101.05 0.79 1.57 16 26 C -0.45 0.66 8.65 101.05 0.87 1.54 16 27 H 0.11 -0.21 7.05 -52.49 -0.37 -0.58 16 28 H 0.09 -0.01 6.03 -52.48 -0.32 -0.33 16 29 H 0.13 -0.20 3.69 -52.49 -0.19 -0.39 16 30 H 0.13 -0.19 6.28 -52.49 -0.33 -0.52 16 31 H 0.09 -0.06 7.64 -51.93 -0.40 -0.46 16 32 H 0.09 -0.07 7.67 -51.93 -0.40 -0.47 16 33 H 0.14 -0.07 7.00 -52.48 -0.37 -0.44 16 34 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 35 H 0.14 -0.42 8.06 -52.49 -0.42 -0.84 16 36 H 0.16 -0.33 8.06 -52.49 -0.42 -0.75 16 37 H 0.08 0.02 7.82 -51.93 -0.41 -0.39 16 38 H 0.37 -0.02 8.59 45.56 0.39 0.38 16 39 H 0.13 0.18 2.98 -52.49 -0.16 0.03 16 40 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 41 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 42 H 0.07 -0.10 6.57 -51.93 -0.34 -0.44 16 43 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 44 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 45 H 0.07 -0.12 7.96 -51.92 -0.41 -0.54 16 46 H 0.07 -0.11 6.57 -51.93 -0.34 -0.45 16 47 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 48 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 LS Contribution 387.66 15.07 5.84 5.84 Total: 0.00 -5.51 387.66 -8.60 -14.10 By element: Atomic # 1 Polarization: -3.91 SS G_CDS: -6.21 Total: -10.12 kcal Atomic # 6 Polarization: 1.69 SS G_CDS: -1.33 Total: 0.36 kcal Atomic # 7 Polarization: -1.09 SS G_CDS: -0.10 Total: -1.19 kcal Atomic # 8 Polarization: -1.32 SS G_CDS: -0.59 Total: -1.91 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -6.21 Total: -7.09 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -5.51 -8.60 -14.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419802.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.112 kcal (2) G-P(sol) polarization free energy of solvation -5.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.595 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.104 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds