Wall clock time and date at job start Mon Mar 8 2021 10:12:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32599 * 1 3 3 C 1.47745 * 120.00285 * 2 1 4 4 C 1.39826 * 120.14193 * 46.30817 * 3 2 1 5 5 O 1.35926 * 120.14854 * 359.97438 * 4 3 2 6 6 C 1.42898 * 116.99760 * 92.04639 * 5 4 3 7 7 F 1.39897 * 109.47449 * 300.00503 * 6 5 4 8 8 F 1.39908 * 109.47021 * 60.00115 * 6 5 4 9 9 C 1.39002 * 119.70119 * 179.79684 * 4 3 2 10 10 O 1.36003 * 120.00312 * 180.20895 * 9 4 3 11 11 C 1.42898 * 116.99944 * 180.25167 * 10 9 4 12 12 C 1.52999 * 109.47464 * 179.97438 * 11 10 9 13 13 C 1.38580 * 119.99108 * 0.45660 * 9 4 3 14 14 C 1.38413 * 120.29486 * 359.79303 * 13 9 4 15 15 C 1.50703 * 119.85210 * 179.97438 * 14 13 9 16 16 O 1.42895 * 109.47035 * 120.01966 * 15 14 13 17 17 Si 1.86299 * 109.46971 * 0.02562 * 15 14 13 18 18 H 1.48497 * 109.47335 * 299.99813 * 17 15 14 19 19 H 1.48499 * 109.47223 * 60.00250 * 17 15 14 20 20 H 1.48498 * 109.46965 * 180.02562 * 17 15 14 21 21 C 1.37915 * 120.29757 * 359.97438 * 14 13 9 22 22 Si 1.86805 * 119.99947 * 180.27419 * 2 1 3 23 23 C 1.86298 * 109.46955 * 90.50025 * 22 2 1 24 24 C 1.86302 * 109.47099 * 210.49593 * 22 2 1 25 25 C 1.86298 * 109.47110 * 330.50043 * 22 2 1 26 26 H 1.07999 * 120.00254 * 357.26358 * 1 2 3 27 27 H 1.07997 * 119.99966 * 177.25991 * 1 2 3 28 28 H 1.09001 * 109.47605 * 179.97438 * 6 5 4 29 29 H 1.08998 * 109.47406 * 299.99885 * 11 10 9 30 30 H 1.09010 * 109.47107 * 59.99652 * 11 10 9 31 31 H 1.09001 * 109.47040 * 59.99629 * 12 11 10 32 32 H 1.08998 * 109.47702 * 179.97438 * 12 11 10 33 33 H 1.08998 * 109.47042 * 300.00509 * 12 11 10 34 34 H 1.08002 * 119.85470 * 179.76950 * 13 9 4 35 35 H 1.08993 * 109.46663 * 240.02296 * 15 14 13 36 36 H 0.96701 * 113.99813 * 179.97438 * 16 15 14 37 37 H 1.07993 * 120.00098 * 180.02562 * 21 14 13 38 38 H 1.09002 * 109.47308 * 59.99886 * 23 22 2 39 39 H 1.09001 * 109.47294 * 179.97438 * 23 22 2 40 40 H 1.08995 * 109.47413 * 299.99849 * 23 22 2 41 41 H 1.09007 * 109.46882 * 54.85463 * 24 22 2 42 42 H 1.09002 * 109.47180 * 174.84799 * 24 22 2 43 43 H 1.08994 * 109.47751 * 294.85387 * 24 22 2 44 44 H 1.08995 * 109.47121 * 60.00235 * 25 22 2 45 45 H 1.09007 * 109.46917 * 180.02562 * 25 22 2 46 46 H 1.08997 * 109.46714 * 299.99690 * 25 22 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3260 0.0000 0.0000 3 6 2.0648 1.2795 0.0000 4 6 1.6925 2.3052 0.8743 5 8 0.6491 2.1298 1.7276 6 6 0.9538 1.6277 3.0303 7 9 1.5611 0.3726 2.9161 8 9 1.8250 2.5101 3.6782 9 6 2.3966 3.5037 0.8696 10 8 2.0425 4.5039 1.7203 11 6 2.8063 5.7100 1.6574 12 6 2.2641 6.7110 2.6796 13 6 3.4562 3.6811 -0.0058 14 6 3.8212 2.6675 -0.8748 15 6 4.9748 2.8714 -1.8229 16 8 5.9821 1.8911 -1.5652 17 14 5.6881 4.5745 -1.5758 18 1 4.6414 5.5933 -1.8435 19 1 6.1669 4.7124 -0.1769 20 1 6.8244 4.7756 -2.5104 21 6 3.1340 1.4717 -0.8769 22 14 2.2600 -1.6178 -0.0077 23 6 2.5837 -2.1394 -1.7666 24 6 3.8812 -1.4031 0.8847 25 6 1.2466 -2.9240 0.8509 26 1 -0.5400 0.9342 0.0447 27 1 -0.5400 -0.9342 -0.0447 28 1 0.0343 1.5355 3.6085 29 1 3.8503 5.4911 1.8812 30 1 2.7308 6.1360 0.6568 31 1 2.3392 6.2852 3.6802 32 1 2.8470 7.6308 2.6319 33 1 1.2202 6.9299 2.4553 34 1 3.9994 4.6145 -0.0102 35 1 4.6233 2.7701 -2.8497 36 1 6.7562 1.9621 -2.1404 37 1 3.4231 0.6840 -1.5567 38 1 3.1767 -1.3751 -2.2691 39 1 3.1291 -3.0832 -1.7712 40 1 1.6353 -2.2650 -2.2888 41 1 3.6963 -1.0104 1.8846 42 1 4.3848 -2.3669 0.9603 43 1 4.5111 -0.7065 0.3315 44 1 0.2981 -3.0496 0.3287 45 1 1.7918 -3.8679 0.8468 46 1 1.0572 -2.6188 1.8800 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419812.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:12:06 Heat of formation + Delta-G solvation = -214.659272 kcal Electronic energy + Delta-G solvation = -30744.063511 eV Core-core repulsion = 26393.955562 eV Total energy + Delta-G solvation = -4350.107950 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 346.137 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -49.84244 -47.96243 -41.62393 -39.34295 -38.81466 -37.19269 -34.73363 -32.94118 -31.09005 -30.47832 -29.43883 -28.34168 -28.18269 -27.54930 -25.79537 -24.97368 -23.22810 -22.71861 -20.47294 -19.62654 -18.96633 -18.73854 -18.58244 -18.34489 -17.47894 -17.09097 -16.78467 -16.10651 -15.79210 -15.65341 -15.33338 -14.88625 -14.68764 -14.54990 -14.38758 -14.34182 -14.07968 -13.97473 -13.87457 -13.81768 -13.78848 -13.57235 -13.35947 -13.21508 -13.16593 -13.08712 -13.01157 -12.93565 -12.70288 -12.60498 -12.32919 -12.25202 -11.92697 -11.81304 -11.75778 -11.20395 -10.80880 -10.74830 -10.45105 -10.30994 -9.34934 -9.10514 -0.16455 0.27164 1.02884 1.21225 1.33053 1.39664 1.76422 1.80584 1.94457 1.99381 2.13742 2.21288 2.63937 2.79082 2.83104 3.24570 3.63587 3.69571 3.74280 3.89826 3.92137 3.95699 4.08275 4.20433 4.23614 4.27749 4.31886 4.55107 4.67118 4.76251 4.77457 4.81257 4.81491 4.82522 4.91502 4.94534 4.98020 4.98520 5.11468 5.18276 5.31898 5.42964 5.51340 5.60933 5.61535 5.73024 5.78934 5.98124 6.44150 6.51031 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.377 4.377 3 C 0.018 3.982 4 C 0.034 3.966 5 O -0.313 6.313 6 C 0.402 3.598 7 F -0.201 7.201 8 F -0.200 7.200 9 C 0.146 3.854 10 O -0.298 6.298 11 C 0.048 3.952 12 C -0.151 4.151 13 C -0.219 4.219 14 C -0.021 4.021 15 C -0.083 4.083 16 O -0.540 6.540 17 Si 0.937 3.063 18 H -0.249 1.249 19 H -0.246 1.246 20 H -0.252 1.252 21 C -0.121 4.121 22 Si 1.048 2.952 23 C -0.447 4.447 24 C -0.446 4.446 25 C -0.447 4.447 26 H 0.101 0.899 27 H 0.106 0.894 28 H 0.170 0.830 29 H 0.063 0.937 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.080 0.920 33 H 0.068 0.932 34 H 0.130 0.870 35 H 0.083 0.917 36 H 0.382 0.618 37 H 0.140 0.860 38 H 0.070 0.930 39 H 0.071 0.929 40 H 0.069 0.931 41 H 0.069 0.931 42 H 0.068 0.932 43 H 0.074 0.926 44 H 0.068 0.932 45 H 0.071 0.929 46 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.209 0.592 -1.978 2.075 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.418 4.418 3 C 0.017 3.983 4 C -0.010 4.010 5 O -0.232 6.232 6 C 0.312 3.688 7 F -0.183 7.183 8 F -0.182 7.182 9 C 0.100 3.900 10 O -0.211 6.211 11 C -0.027 4.027 12 C -0.208 4.208 13 C -0.238 4.238 14 C -0.021 4.021 15 C -0.193 4.193 16 O -0.346 6.346 17 Si 0.759 3.241 18 H -0.173 1.173 19 H -0.169 1.169 20 H -0.176 1.176 21 C -0.140 4.140 22 Si 1.239 2.761 23 C -0.555 4.555 24 C -0.555 4.555 25 C -0.555 4.555 26 H 0.120 0.880 27 H 0.124 0.876 28 H 0.186 0.814 29 H 0.081 0.919 30 H 0.081 0.919 31 H 0.088 0.912 32 H 0.099 0.901 33 H 0.087 0.913 34 H 0.147 0.853 35 H 0.101 0.899 36 H 0.229 0.771 37 H 0.157 0.843 38 H 0.089 0.911 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.089 0.911 42 H 0.087 0.913 43 H 0.093 0.907 44 H 0.088 0.912 45 H 0.091 0.909 46 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.219 1.361 -1.258 1.866 hybrid contribution 0.610 0.067 -0.402 0.733 sum 0.391 1.428 -1.660 2.224 Atomic orbital electron populations 1.24395 0.95403 1.02202 0.92449 1.27876 1.01117 1.07106 1.05712 1.19059 0.93695 0.91861 0.93686 1.17852 0.94003 0.91803 0.97295 1.86708 1.30876 1.83316 1.22324 1.23558 0.89489 0.72575 0.83153 1.93059 1.86358 1.43098 1.95745 1.93101 1.73849 1.69637 1.81574 1.19013 0.92510 0.88517 0.90007 1.86199 1.56045 1.22830 1.55978 1.22921 0.95399 0.83663 1.00684 1.21765 1.02542 0.97441 0.99048 1.20921 1.01053 1.01257 1.00565 1.18984 0.94595 0.93723 0.94828 1.24715 0.90644 1.03999 0.99955 1.86512 1.30726 1.54568 1.62805 0.85879 0.80688 0.75541 0.81998 1.17251 1.16904 1.17554 1.20868 0.95123 0.97521 1.00444 0.78394 0.66611 0.63376 0.67712 1.26139 1.04977 1.05753 1.18596 1.26101 1.16252 1.04613 1.08486 1.26114 1.09057 1.12113 1.08168 0.88045 0.87629 0.81375 0.91893 0.91887 0.91229 0.90134 0.91277 0.85254 0.89889 0.77053 0.84274 0.91087 0.90996 0.91159 0.91140 0.91304 0.90705 0.91240 0.90936 0.90914 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.04 12.73 28.83 0.37 0.32 16 2 C -0.38 -0.42 3.22 -37.60 -0.12 -0.54 16 3 C 0.02 0.05 5.15 -104.90 -0.54 -0.49 16 4 C 0.03 0.14 5.18 -38.70 -0.20 -0.06 16 5 O -0.31 -1.02 8.07 -34.10 -0.28 -1.30 16 6 C 0.40 0.67 6.35 101.05 0.64 1.31 16 7 F -0.20 -0.51 16.05 2.25 0.04 -0.47 16 8 F -0.20 -0.79 16.17 2.25 0.04 -0.75 16 9 C 0.15 0.61 6.40 -39.17 -0.25 0.36 16 10 O -0.30 -1.17 9.12 -34.34 -0.31 -1.48 16 11 C 0.05 0.05 5.46 37.16 0.20 0.25 16 12 C -0.15 0.07 10.28 37.16 0.38 0.45 16 13 C -0.22 -0.64 7.66 -39.39 -0.30 -0.94 16 14 C -0.02 -0.05 5.42 -104.67 -0.57 -0.61 16 15 C -0.08 0.02 2.81 36.01 0.10 0.12 16 16 O -0.54 0.09 12.74 -35.23 -0.45 -0.36 16 17 Si 0.94 -0.34 25.06 -169.99 -4.26 -4.60 16 18 H -0.25 0.00 7.11 56.52 0.40 0.40 16 19 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 20 H -0.25 0.15 7.11 56.52 0.40 0.56 16 21 C -0.12 -0.27 8.46 -39.19 -0.33 -0.60 16 22 Si 1.05 -0.57 11.18 -169.99 -1.90 -2.47 16 23 C -0.45 0.29 8.65 101.05 0.87 1.16 16 24 C -0.45 -0.52 8.65 101.05 0.87 0.35 16 25 C -0.45 0.22 8.51 101.05 0.86 1.08 16 26 H 0.10 0.12 7.09 -52.49 -0.37 -0.25 16 27 H 0.11 -0.17 7.28 -52.49 -0.38 -0.55 16 28 H 0.17 -0.45 8.14 -51.93 -0.42 -0.87 16 29 H 0.06 0.03 7.66 -51.93 -0.40 -0.37 16 30 H 0.06 0.00 7.66 -51.92 -0.40 -0.40 16 31 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.13 0.19 3.07 -52.49 -0.16 0.02 16 35 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 36 H 0.38 -1.76 8.74 45.56 0.40 -1.37 16 37 H 0.14 0.08 6.56 -52.49 -0.34 -0.27 16 38 H 0.07 -0.05 7.20 -51.93 -0.37 -0.42 16 39 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 40 H 0.07 -0.06 7.96 -51.93 -0.41 -0.48 16 41 H 0.07 0.16 7.96 -51.92 -0.41 -0.25 16 42 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 43 H 0.07 0.14 7.73 -51.93 -0.40 -0.27 16 44 H 0.07 -0.08 7.64 -51.93 -0.40 -0.48 16 45 H 0.07 -0.05 7.96 -51.92 -0.41 -0.47 16 46 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 LS Contribution 383.56 15.07 5.78 5.78 Total: 0.00 -6.56 383.56 -5.56 -12.12 By element: Atomic # 1 Polarization: -2.43 SS G_CDS: -6.21 Total: -8.64 kcal Atomic # 6 Polarization: 0.18 SS G_CDS: 1.99 Total: 2.17 kcal Atomic # 8 Polarization: -2.10 SS G_CDS: -1.04 Total: -3.14 kcal Atomic # 9 Polarization: -1.29 SS G_CDS: 0.07 Total: -1.22 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -6.16 Total: -7.07 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -6.56 -5.56 -12.12 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419812.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -202.540 kcal (2) G-P(sol) polarization free energy of solvation -6.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -209.095 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.119 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds