Wall clock time and date at job start Mon Mar 8 2021 10:21:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32563 * 1 3 3 C 1.47808 * 120.00396 * 2 1 4 4 C 1.39511 * 120.14251 * 312.83658 * 3 2 1 5 5 C 1.37991 * 119.86061 * 179.97438 * 4 3 2 6 6 C 1.50700 * 119.93476 * 180.02562 * 5 4 3 7 7 O 1.42900 * 109.46914 * 299.99989 * 6 5 4 8 8 Si 1.86305 * 109.47330 * 180.02562 * 6 5 4 9 9 H 1.48497 * 109.46824 * 179.97438 * 8 6 5 10 10 H 1.48494 * 109.47039 * 300.00062 * 8 6 5 11 11 H 1.48501 * 109.46857 * 59.99825 * 8 6 5 12 12 C 1.38328 * 120.14064 * 0.27673 * 5 4 3 13 13 C 1.38378 * 120.28259 * 359.44886 * 12 5 4 14 14 C 1.50700 * 119.92897 * 180.27368 * 13 12 5 15 15 F 1.39891 * 109.47259 * 270.27567 * 14 13 12 16 16 F 1.39901 * 109.46825 * 30.27455 * 14 13 12 17 17 F 1.39901 * 109.46975 * 150.27260 * 14 13 12 18 18 C 1.37946 * 120.13922 * 0.55110 * 13 12 5 19 19 Si 1.86805 * 119.99675 * 180.02562 * 2 1 3 20 20 C 1.86300 * 109.46892 * 174.67938 * 19 2 1 21 21 C 1.86295 * 109.47207 * 294.67853 * 19 2 1 22 22 C 1.86304 * 109.47106 * 54.68212 * 19 2 1 23 23 H 1.08003 * 120.00197 * 179.97438 * 1 2 3 24 24 H 1.07999 * 119.99862 * 359.97438 * 1 2 3 25 25 H 1.08001 * 120.07349 * 0.02562 * 4 3 2 26 26 H 1.08993 * 109.46889 * 59.99890 * 6 5 4 27 27 H 0.96696 * 114.00187 * 300.00102 * 7 6 5 28 28 H 1.07993 * 119.85998 * 179.70467 * 12 5 4 29 29 H 1.08006 * 120.07336 * 179.75022 * 18 13 12 30 30 H 1.08997 * 109.47352 * 68.28151 * 20 19 2 31 31 H 1.09004 * 109.46946 * 188.28313 * 20 19 2 32 32 H 1.08993 * 109.47189 * 308.27816 * 20 19 2 33 33 H 1.09004 * 109.46978 * 60.00053 * 21 19 2 34 34 H 1.09004 * 109.47235 * 179.97438 * 21 19 2 35 35 H 1.08998 * 109.47153 * 300.00064 * 21 19 2 36 36 H 1.08993 * 109.47155 * 59.99678 * 22 19 2 37 37 H 1.09001 * 109.46943 * 180.02562 * 22 19 2 38 38 H 1.09004 * 109.46953 * 299.99868 * 22 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3256 0.0000 0.0000 3 6 2.0648 1.2800 0.0000 4 6 1.7047 2.2969 -0.8847 5 6 2.3984 3.4897 -0.8793 6 6 2.0105 4.5895 -1.8339 7 8 2.1384 4.1208 -3.1778 8 14 3.1304 6.0565 -1.5793 9 1 2.7485 7.1398 -2.5204 10 1 2.9982 6.5437 -0.1828 11 1 4.5375 5.6548 -1.8323 12 6 3.4525 3.6763 -0.0032 13 6 3.8110 2.6738 0.8807 14 6 4.9567 2.8880 1.8359 15 9 6.1491 2.4710 1.2350 16 9 5.0472 4.2463 2.1585 17 9 4.7372 2.1456 3.0012 18 6 3.1255 1.4767 0.8853 19 14 2.2596 -1.6178 -0.0007 20 6 4.0846 -1.2812 -0.1634 21 6 1.9349 -2.5230 1.5948 22 6 1.6906 -2.6627 -1.4344 23 1 -0.5400 -0.9353 -0.0004 24 1 -0.5400 0.9353 0.0004 25 1 0.8843 2.1511 -1.5718 26 1 0.9776 4.8839 -1.6485 27 1 3.0335 3.8411 -3.4133 28 1 3.9953 4.6099 -0.0062 29 1 3.4089 0.6935 1.5729 30 1 4.4473 -0.7981 0.7438 31 1 4.6158 -2.2214 -0.3116 32 1 4.2587 -0.6271 -1.0178 33 1 0.8671 -2.7200 1.6900 34 1 2.4795 -3.4673 1.5942 35 1 2.2678 -1.9117 2.4336 36 1 1.8805 -2.1331 -2.3679 37 1 2.2352 -3.6069 -1.4345 38 1 0.6227 -2.8596 -1.3392 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419818.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:21:25 Heat of formation + Delta-G solvation = -187.246208 kcal Electronic energy + Delta-G solvation = -23475.746362 eV Core-core repulsion = 19605.812779 eV Total energy + Delta-G solvation = -3869.933584 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 304.097 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -51.12589 -48.64321 -48.58109 -40.97503 -37.91115 -35.40365 -33.31059 -31.16163 -29.63868 -28.49968 -28.43266 -27.15008 -26.97271 -24.29569 -22.53345 -20.66933 -19.45557 -19.34853 -19.12710 -17.81530 -17.55779 -16.63283 -16.55056 -16.31750 -15.49172 -15.47539 -15.34209 -15.07555 -14.96133 -14.75488 -14.73443 -14.69502 -14.26760 -14.05767 -13.97311 -13.79314 -13.67958 -13.40806 -13.37442 -13.29507 -13.23526 -13.03246 -12.69427 -12.32788 -12.14629 -11.81848 -11.56414 -11.11127 -10.96636 -10.71776 -10.50814 -10.18962 -9.57249 -0.26886 -0.12808 0.95601 1.02452 1.34510 1.42128 1.58582 1.63795 1.76334 1.83067 1.96628 2.34764 2.52236 2.68716 2.97378 3.28213 3.42304 3.52094 3.56446 3.80113 4.05118 4.05511 4.34874 4.44417 4.55933 4.62115 4.63757 4.66922 4.68512 4.69126 4.70353 4.75011 4.88475 5.02426 5.14283 5.26203 5.39009 5.46895 5.48921 5.53288 5.67413 6.40640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.378 4.378 3 C -0.029 4.029 4 C -0.057 4.057 5 C -0.116 4.116 6 C -0.077 4.077 7 O -0.535 6.535 8 Si 0.936 3.064 9 H -0.248 1.248 10 H -0.246 1.246 11 H -0.248 1.248 12 C -0.087 4.087 13 C -0.171 4.171 14 C 0.507 3.493 15 F -0.174 7.174 16 F -0.176 7.176 17 F -0.174 7.174 18 C -0.065 4.065 19 Si 1.048 2.952 20 C -0.450 4.450 21 C -0.449 4.449 22 C -0.447 4.447 23 H 0.108 0.892 24 H 0.097 0.903 25 H 0.138 0.862 26 H 0.123 0.877 27 H 0.378 0.622 28 H 0.131 0.869 29 H 0.141 0.859 30 H 0.069 0.931 31 H 0.073 0.927 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.070 0.930 36 H 0.071 0.929 37 H 0.072 0.928 38 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.943 -1.948 -1.197 3.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.419 4.419 3 C -0.029 4.029 4 C -0.075 4.075 5 C -0.117 4.117 6 C -0.188 4.188 7 O -0.340 6.340 8 Si 0.758 3.242 9 H -0.171 1.171 10 H -0.169 1.169 11 H -0.171 1.171 12 C -0.104 4.104 13 C -0.173 4.173 14 C 0.453 3.547 15 F -0.155 7.155 16 F -0.158 7.158 17 F -0.156 7.156 18 C -0.083 4.083 19 Si 1.239 2.761 20 C -0.557 4.557 21 C -0.556 4.556 22 C -0.555 4.555 23 H 0.126 0.874 24 H 0.115 0.885 25 H 0.156 0.844 26 H 0.141 0.859 27 H 0.225 0.775 28 H 0.149 0.851 29 H 0.159 0.841 30 H 0.088 0.912 31 H 0.092 0.908 32 H 0.090 0.910 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.038 -1.013 -1.056 2.509 hybrid contribution 0.444 -0.284 0.253 0.585 sum -1.593 -1.297 -0.804 2.206 Atomic orbital electron populations 1.24310 0.95325 1.02227 0.93406 1.27970 1.01114 1.07592 1.05233 1.18953 0.94963 0.94008 0.95021 1.21419 0.98182 0.91102 0.96826 1.20225 0.96245 0.97087 0.98127 1.24949 1.09460 1.01515 0.82906 1.86529 1.35213 1.86267 1.26039 0.85856 0.78922 0.77720 0.81719 1.17113 1.16941 1.17098 1.20823 0.96779 0.98215 0.94625 1.19763 0.98839 0.97994 1.00661 1.18293 0.82544 0.74075 0.79816 1.93245 1.48987 1.90002 1.83267 1.93207 1.96544 1.32742 1.93271 1.93208 1.94683 1.76853 1.50825 1.21103 0.93789 0.95530 0.97851 0.78389 0.66335 0.63484 0.67863 1.26226 1.19488 1.05230 1.04802 1.26132 1.05130 1.08296 1.16078 1.26105 1.06010 1.09411 1.13948 0.87410 0.88518 0.84394 0.85917 0.77456 0.85135 0.84100 0.91209 0.90834 0.90996 0.91104 0.90836 0.91048 0.90988 0.90858 0.91156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.25 13.32 28.82 0.38 0.64 16 2 C -0.38 0.63 4.41 -37.58 -0.17 0.46 16 3 C -0.03 0.01 5.22 -105.02 -0.55 -0.54 16 4 C -0.06 0.02 8.90 -39.20 -0.35 -0.33 16 5 C -0.12 0.03 5.38 -104.68 -0.56 -0.53 16 6 C -0.08 0.10 2.82 36.01 0.10 0.20 16 7 O -0.54 0.39 12.76 -35.23 -0.45 -0.06 16 8 Si 0.94 -0.68 25.06 -169.99 -4.26 -4.94 16 9 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 10 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 11 H -0.25 0.10 7.11 56.52 0.40 0.50 16 12 C -0.09 -0.05 8.02 -39.50 -0.32 -0.37 16 13 C -0.17 -0.19 5.45 -104.68 -0.57 -0.76 16 14 C 0.51 0.99 3.36 36.01 0.12 1.11 16 15 F -0.17 -0.44 17.30 2.25 0.04 -0.40 16 16 F -0.18 -0.46 16.46 2.25 0.04 -0.42 16 17 F -0.17 -0.38 16.46 2.25 0.04 -0.34 16 18 C -0.06 -0.01 7.57 -39.20 -0.30 -0.31 16 19 Si 1.05 -3.05 11.58 -169.99 -1.97 -5.02 16 20 C -0.45 0.73 7.82 101.05 0.79 1.52 16 21 C -0.45 0.96 8.65 101.05 0.87 1.83 16 22 C -0.45 0.97 8.65 101.05 0.87 1.85 16 23 H 0.11 -0.40 7.73 -52.48 -0.41 -0.81 16 24 H 0.10 -0.21 7.86 -52.49 -0.41 -0.62 16 25 H 0.14 -0.17 7.96 -52.49 -0.42 -0.59 16 26 H 0.12 -0.28 7.96 -51.93 -0.41 -0.69 16 27 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 28 H 0.13 0.01 4.40 -52.49 -0.23 -0.22 16 29 H 0.14 -0.16 5.79 -52.48 -0.30 -0.46 16 30 H 0.07 -0.10 6.46 -51.93 -0.34 -0.44 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 32 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 33 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 38 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 LS Contribution 331.08 15.07 4.99 4.99 Total: 0.00 -4.06 331.08 -5.47 -9.53 By element: Atomic # 1 Polarization: -3.89 SS G_CDS: -4.23 Total: -8.11 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: 0.33 Total: 4.77 kcal Atomic # 8 Polarization: 0.39 SS G_CDS: -0.45 Total: -0.06 kcal Atomic # 9 Polarization: -1.27 SS G_CDS: 0.11 Total: -1.16 kcal Atomic # 14 Polarization: -3.73 SS G_CDS: -6.23 Total: -9.96 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -4.06 -5.47 -9.53 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419818.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -177.713 kcal (2) G-P(sol) polarization free energy of solvation -4.065 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.778 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -9.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds