Wall clock time and date at job start Mon Mar 8 2021 10:24:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.32566 * 1 3 3 C 1.47806 * 120.00418 * 2 1 4 4 C 1.39517 * 120.14374 * 180.02562 * 3 2 1 5 5 C 1.37997 * 119.85449 * 180.02562 * 4 3 2 6 6 C 1.38323 * 120.14176 * 0.02562 * 5 4 3 7 7 C 1.50706 * 119.85228 * 180.02562 * 6 5 4 8 8 O 1.42900 * 109.47328 * 104.99775 * 7 6 5 9 9 Si 1.86299 * 109.47180 * 344.99384 * 7 6 5 10 10 H 1.48493 * 109.46923 * 60.00607 * 9 7 6 11 11 H 1.48496 * 109.46886 * 180.02562 * 9 7 6 12 12 H 1.48497 * 109.47094 * 300.00458 * 9 7 6 13 13 C 1.38361 * 120.29001 * 359.97438 * 6 5 4 14 14 C 1.50704 * 119.93067 * 180.02562 * 13 6 5 15 15 F 1.39903 * 109.46934 * 180.02562 * 14 13 6 16 16 F 1.39893 * 109.47329 * 300.00379 * 14 13 6 17 17 F 1.39901 * 109.46485 * 60.00590 * 14 13 6 18 18 C 1.37954 * 120.14037 * 359.76753 * 13 6 5 19 19 Si 1.86801 * 119.99740 * 179.97438 * 2 1 3 20 20 C 1.86298 * 109.47258 * 359.97438 * 19 2 1 21 21 C 1.86298 * 109.47026 * 120.00111 * 19 2 1 22 22 C 1.86301 * 109.47053 * 240.00125 * 19 2 1 23 23 H 1.08002 * 120.00489 * 180.02562 * 1 2 3 24 24 H 1.08005 * 119.99743 * 359.72519 * 1 2 3 25 25 H 1.07997 * 120.07044 * 0.02562 * 4 3 2 26 26 H 1.08001 * 119.92349 * 180.02562 * 5 4 3 27 27 H 1.09002 * 109.46786 * 224.99814 * 7 6 5 28 28 H 0.96693 * 113.99815 * 299.99815 * 8 7 6 29 29 H 1.08003 * 120.07525 * 180.25439 * 18 13 6 30 30 H 1.09005 * 109.47054 * 60.00202 * 20 19 2 31 31 H 1.08995 * 109.47563 * 179.97438 * 20 19 2 32 32 H 1.09004 * 109.47189 * 300.00136 * 20 19 2 33 33 H 1.08998 * 109.47156 * 60.00082 * 21 19 2 34 34 H 1.09003 * 109.47006 * 180.02562 * 21 19 2 35 35 H 1.08997 * 109.46887 * 299.99740 * 21 19 2 36 36 H 1.08999 * 109.47593 * 60.00210 * 22 19 2 37 37 H 1.09003 * 109.47036 * 179.97438 * 22 19 2 38 38 H 1.08998 * 109.47195 * 299.99958 * 22 19 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3257 0.0000 0.0000 3 6 2.0648 1.2800 0.0000 4 6 3.4599 1.2834 -0.0005 5 6 4.1440 2.4819 0.0000 6 6 3.4494 3.6781 0.0016 7 6 4.2030 4.9832 0.0016 8 8 4.1378 5.5709 -1.2993 9 14 5.9833 4.6723 0.4541 10 1 6.5920 3.7493 -0.5372 11 1 6.7256 5.9583 0.4547 12 1 6.0510 4.0615 1.8059 13 6 2.0658 3.6816 0.0021 14 6 1.3172 4.9896 0.0033 15 9 -0.0592 4.7391 0.0043 16 9 1.6584 5.7212 1.1458 17 9 1.6575 5.7225 -1.1387 18 6 1.3700 2.4904 -0.0038 19 14 2.2596 -1.6178 0.0007 20 6 1.0489 -3.0338 0.0021 21 6 3.3307 -1.7172 -1.5203 22 6 3.3306 -1.7158 1.5219 23 1 -0.5401 -0.9353 0.0004 24 1 -0.5400 0.9354 0.0045 25 1 4.0034 0.3501 -0.0014 26 1 5.2240 2.4858 -0.0008 27 1 3.7562 5.6607 0.7292 28 1 4.5182 5.0218 -1.9984 29 1 0.2900 2.4944 -0.0075 30 1 0.4219 -2.9766 -0.8877 31 1 1.5938 -3.9778 0.0021 32 1 0.4226 -2.9754 0.8923 33 1 4.0390 -0.8887 -1.5207 34 1 3.8753 -2.6614 -1.5201 35 1 2.7040 -1.6598 -2.4103 36 1 2.7040 -1.6577 2.4119 37 1 3.8752 -2.6601 1.5226 38 1 4.0390 -0.8874 1.5216 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_271570_14761194_12419822.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:24:06 Heat of formation + Delta-G solvation = -179.668811 kcal Electronic energy + Delta-G solvation = -23695.540825 eV Core-core repulsion = 19825.935822 eV Total energy + Delta-G solvation = -3869.605003 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 304.097 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -50.99044 -48.55588 -48.34287 -40.98375 -37.91257 -35.29716 -33.24493 -31.44087 -29.73294 -28.60225 -28.52351 -27.38606 -26.46444 -23.76250 -22.93239 -20.87581 -19.33266 -19.26063 -18.98215 -18.11095 -17.30450 -16.66158 -16.30357 -16.08122 -15.67215 -15.26645 -15.09437 -14.99883 -14.81925 -14.55050 -14.52209 -14.46117 -14.37711 -14.22060 -14.21240 -14.00690 -13.53036 -13.51820 -13.38036 -13.21478 -13.15754 -13.01038 -12.62111 -12.22676 -12.14991 -11.77604 -11.69833 -11.04350 -10.92511 -10.83244 -10.51565 -10.37290 -9.37207 -0.42733 -0.08680 1.01717 1.06402 1.32203 1.44643 1.53252 1.69805 1.79038 1.83321 1.91229 2.40767 2.54864 2.82143 3.11190 3.32703 3.45393 3.56265 3.64209 3.73831 3.97560 4.11484 4.33595 4.44511 4.56560 4.58309 4.59083 4.62103 4.62582 4.65403 4.65486 4.71024 4.86759 5.04518 5.07501 5.21720 5.34851 5.43425 5.44936 5.52338 5.70069 6.48130 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.378 4.378 3 C -0.024 4.024 4 C -0.090 4.090 5 C -0.123 4.123 6 C -0.076 4.076 7 C -0.105 4.105 8 O -0.524 6.524 9 Si 0.955 3.045 10 H -0.248 1.248 11 H -0.248 1.248 12 H -0.246 1.246 13 C -0.151 4.151 14 C 0.506 3.494 15 F -0.181 7.181 16 F -0.177 7.177 17 F -0.158 7.158 18 C -0.076 4.076 19 Si 1.048 2.952 20 C -0.450 4.450 21 C -0.451 4.451 22 C -0.452 4.452 23 H 0.111 0.889 24 H 0.097 0.903 25 H 0.140 0.860 26 H 0.137 0.863 27 H 0.124 0.876 28 H 0.376 0.624 29 H 0.142 0.858 30 H 0.071 0.929 31 H 0.074 0.926 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.615 -4.990 0.029 5.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C -0.419 4.419 3 C -0.024 4.024 4 C -0.107 4.107 5 C -0.141 4.141 6 C -0.077 4.077 7 C -0.215 4.215 8 O -0.328 6.328 9 Si 0.776 3.224 10 H -0.172 1.172 11 H -0.172 1.172 12 H -0.169 1.169 13 C -0.152 4.152 14 C 0.452 3.548 15 F -0.162 7.162 16 F -0.158 7.158 17 F -0.139 7.139 18 C -0.094 4.094 19 Si 1.240 2.760 20 C -0.558 4.558 21 C -0.559 4.559 22 C -0.559 4.559 23 H 0.130 0.870 24 H 0.115 0.885 25 H 0.158 0.842 26 H 0.154 0.846 27 H 0.141 0.859 28 H 0.223 0.777 29 H 0.159 0.841 30 H 0.090 0.910 31 H 0.093 0.907 32 H 0.090 0.910 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.092 0.908 38 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 2.136 -4.539 0.585 5.050 hybrid contribution -0.614 0.017 -0.367 0.716 sum 1.521 -4.522 0.218 4.776 Atomic orbital electron populations 1.24509 0.95780 1.02481 0.93235 1.28072 1.01272 1.07798 1.04781 1.18947 0.92884 0.92720 0.97861 1.21563 0.93596 0.98475 0.97083 1.21066 1.00363 0.91598 1.01034 1.20106 0.92545 0.96330 0.98726 1.25330 1.11608 0.94156 0.90429 1.86645 1.84653 1.46123 1.15401 0.85601 0.74217 0.81185 0.81394 1.17187 1.17152 1.16908 1.19768 0.94043 0.92304 1.09116 1.18248 0.76877 0.85180 0.74483 1.93165 1.32559 1.94198 1.96294 1.93172 1.91795 1.79544 1.51318 1.93307 1.91703 1.78873 1.49995 1.21286 1.00926 0.90553 0.96631 0.78377 0.66481 0.63417 0.67753 1.26141 1.11345 1.13680 1.04671 1.26214 1.09704 1.04694 1.15254 1.26218 1.09717 1.04698 1.15265 0.87039 0.88466 0.84208 0.84590 0.85857 0.77740 0.84071 0.90975 0.90702 0.90971 0.91098 0.90820 0.90888 0.90884 0.90816 0.91094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.22 13.39 28.82 0.39 0.61 16 2 C -0.38 0.56 4.70 -37.58 -0.18 0.38 16 3 C -0.02 0.00 5.84 -105.01 -0.61 -0.61 16 4 C -0.09 0.08 8.71 -39.19 -0.34 -0.26 16 5 C -0.12 0.08 8.64 -39.64 -0.34 -0.26 16 6 C -0.08 -0.05 5.23 -104.54 -0.55 -0.60 16 7 C -0.11 -0.03 2.01 36.01 0.07 0.04 16 8 O -0.52 -0.41 10.85 -35.23 -0.38 -0.79 16 9 Si 0.95 -0.84 25.48 -169.99 -4.33 -5.17 16 10 H -0.25 0.42 6.72 56.52 0.38 0.80 16 11 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 12 H -0.25 0.10 7.11 56.52 0.40 0.50 16 13 C -0.15 -0.27 5.37 -104.68 -0.56 -0.83 16 14 C 0.51 1.50 2.87 36.01 0.10 1.60 16 15 F -0.18 -0.56 15.97 2.25 0.04 -0.52 16 16 F -0.18 -0.59 15.40 2.25 0.03 -0.55 16 17 F -0.16 -0.64 14.87 2.25 0.03 -0.60 16 18 C -0.08 -0.07 8.78 -39.19 -0.34 -0.42 16 19 Si 1.05 -3.54 10.80 -169.99 -1.84 -5.37 16 20 C -0.45 1.25 7.86 101.05 0.79 2.05 16 21 C -0.45 1.19 8.65 101.05 0.87 2.07 16 22 C -0.45 1.17 8.65 101.05 0.87 2.04 16 23 H 0.11 -0.37 7.05 -52.49 -0.37 -0.74 16 24 H 0.10 -0.18 6.04 -52.48 -0.32 -0.49 16 25 H 0.14 -0.44 3.71 -52.49 -0.19 -0.63 16 26 H 0.14 -0.34 4.86 -52.49 -0.26 -0.59 16 27 H 0.12 0.09 5.98 -51.93 -0.31 -0.22 16 28 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 29 H 0.14 0.01 5.26 -52.48 -0.28 -0.27 16 30 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 31 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 32 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 33 H 0.07 -0.20 6.57 -51.93 -0.34 -0.54 16 34 H 0.07 -0.21 7.96 -51.93 -0.41 -0.63 16 35 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 36 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 37 H 0.07 -0.21 7.96 -51.93 -0.41 -0.62 16 38 H 0.07 -0.19 6.58 -51.93 -0.34 -0.53 16 LS Contribution 315.49 15.07 4.75 4.75 Total: 0.00 -4.58 315.49 -5.23 -9.82 By element: Atomic # 1 Polarization: -3.64 SS G_CDS: -3.72 Total: -7.36 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 0.18 Total: 5.80 kcal Atomic # 8 Polarization: -0.41 SS G_CDS: -0.38 Total: -0.79 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 0.10 Total: -1.67 kcal Atomic # 14 Polarization: -4.38 SS G_CDS: -6.17 Total: -10.55 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -4.58 -5.23 -9.82 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_271570_14761194_12419822.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -169.851 kcal (2) G-P(sol) polarization free energy of solvation -4.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -174.436 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -9.818 kcal (6) G-S(sol) free energy of system = (1) + (5) -179.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds